RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 FTSJ3Q8IY81 847 aaKnown RBP9.85□□□□□ -0.83
VRK2-203ENST00000417641 BMP2KLQ5H9B9 411 aa9.84□□□□□ -0.83
VRK2-203ENST00000417641 EFCAB2Q5VUJ9 269 aa9.84□□□□□ -0.83
VRK2-203ENST00000417641 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
VRK2-203ENST00000417641 PLEKHF1Q96S99 279 aa9.84□□□□□ -0.83
VRK2-203ENST00000417641 SLC12A5Q9H2X9 1139 aa9.84□□□□□ -0.83
VRK2-203ENST00000417641 ZC3H13Q5T200 1668 aaKnown RBP9.84□□□□□ -0.83
VRK2-203ENST00000417641 TMEM57Q8N5G2 664 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 TSR2Q969E8 191 aaKnown RBP9.83□□□□□ -0.84
VRK2-203ENST00000417641 SMC4Q9NTJ3 1288 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 TRIM35Q9UPQ4 493 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 KLHL40Q2TBA0 621 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 CFAP74Q9C0B2 1584 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 UGGT1Q9NYU2 1555 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 IL16Q14005 1332 aa9.83□□□□□ -0.84
VRK2-203ENST00000417641 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
VRK2-203ENST00000417641 ZNF445P59923 1031 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 CFAP53Q96M91 514 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 NOB1Q9ULX3 412 aaKnown RBP9.82□□□□□ -0.84
VRK2-203ENST00000417641 K7ELQ4 463 aaPredicted RBP9.82□□□□□ -0.84
VRK2-203ENST00000417641 SSFA2P28290 1259 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 TNNT2P45379 298 aaPredicted RBP9.82□□□□□ -0.84
VRK2-203ENST00000417641 CHD1LQ86WJ1 897 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 ITPRIPQ8IWB1 547 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 MROH1Q8NDA8 1641 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 ADGRB1O14514 1584 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 NSD2O96028 1365 aa9.82□□□□□ -0.84
VRK2-203ENST00000417641 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
VRK2-203ENST00000417641 NASPP49321 788 aaPredicted RBP9.81□□□□□ -0.84
VRK2-203ENST00000417641 HS1BP3Q53T59 392 aa9.81□□□□□ -0.84
VRK2-203ENST00000417641 GAS2L2Q8NHY3 880 aa9.81□□□□□ -0.84
VRK2-203ENST00000417641 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
VRK2-203ENST00000417641 ABCC11Q96J66 1382 aa9.81□□□□□ -0.84
VRK2-203ENST00000417641 MED14O60244 1454 aa9.81□□□□□ -0.84
VRK2-203ENST00000417641 COL3A1P02461 1466 aaPredicted RBP9.81□□□□□ -0.84
VRK2-203ENST00000417641 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
VRK2-203ENST00000417641 PDLIM2Q96JY6 352 aa9.81□□□□□ -0.84
VRK2-203ENST00000417641 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.81□□□□□ -0.84
VRK2-203ENST00000417641 MROH2AA6NES4 1674 aa9.81□□□□□ -0.84
VRK2-203ENST00000417641 KIF16BQ96L93 1317 aa9.8□□□□□ -0.84
VRK2-203ENST00000417641 CYP2E1P05181 493 aaPredicted RBP9.8□□□□□ -0.84
VRK2-203ENST00000417641 TMPOP42166 694 aaKnown RBP9.8□□□□□ -0.84
VRK2-203ENST00000417641 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
VRK2-203ENST00000417641 CALD1Q05682 793 aaKnown RBP9.8□□□□□ -0.84
VRK2-203ENST00000417641 LNPKQ9C0E8 428 aa9.8□□□□□ -0.84
VRK2-203ENST00000417641 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
VRK2-203ENST00000417641 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
VRK2-203ENST00000417641 ARAP3Q8WWN8 1544 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 ZNF500O60304 480 aaPredicted RBP9.79□□□□□ -0.84
VRK2-203ENST00000417641 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
VRK2-203ENST00000417641 PIAS4Q8N2W9 510 aaPredicted RBP9.79□□□□□ -0.84
VRK2-203ENST00000417641 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
VRK2-203ENST00000417641 C14orf93Q9H972 538 aaKnown RBP9.79□□□□□ -0.84
VRK2-203ENST00000417641 PRDM4Q9UKN5 801 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 QRICH2Q9H0J4 1663 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 FANCAO15360 1455 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 PIK3R4Q99570 1358 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 ALDH1L2Q3SY69 923 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 AFAP1Q8N556 730 aa9.79□□□□□ -0.84
VRK2-203ENST00000417641 NOL7Q9UMY1 257 aaKnown RBP9.79□□□□□ -0.84
VRK2-203ENST00000417641 ADGRB3O60242 1522 aa9.78□□□□□ -0.84
VRK2-203ENST00000417641 REREQ9P2R6 1566 aa9.78□□□□□ -0.84
VRK2-203ENST00000417641 ANKRD36BQ8N2N9 1353 aa9.78□□□□□ -0.84
VRK2-203ENST00000417641 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
VRK2-203ENST00000417641 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 PPRC1Q5VV67 1664 aaKnown RBP9.77□□□□□ -0.85
VRK2-203ENST00000417641 IPO8O15397 1037 aaKnown RBP9.77□□□□□ -0.85
VRK2-203ENST00000417641 GCC1Q96CN9 775 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 LMBRD1Q9NUN5 540 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.85
VRK2-203ENST00000417641 KIF1BO60333 1816 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 LMTK2Q8IWU2 1503 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 RBSNQ9H1K0 784 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 TRAK1Q9UPV9 953 aa9.77□□□□□ -0.85
VRK2-203ENST00000417641 GOLGA6L22H0YM25 854 aa9.76□□□□□ -0.85
VRK2-203ENST00000417641 SIRT2Q8IXJ6 389 aa9.76□□□□□ -0.85
VRK2-203ENST00000417641 MAP7D2Q96T17 732 aa9.76□□□□□ -0.85
VRK2-203ENST00000417641 MSNP26038 577 aaKnown RBP9.75□□□□□ -0.85
VRK2-203ENST00000417641 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
VRK2-203ENST00000417641 ATP7AQ04656 1500 aa9.75□□□□□ -0.85
VRK2-203ENST00000417641 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
VRK2-203ENST00000417641 PTCH1Q13635 1447 aa9.75□□□□□ -0.85
VRK2-203ENST00000417641 UHRF1BP1LA0JNW5 1464 aa9.75□□□□□ -0.85
VRK2-203ENST00000417641 ANKRD45Q5TZF3 282 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 ZCCHC11Q5TAX3 1644 aaKnown RBP9.74□□□□□ -0.85
VRK2-203ENST00000417641 KIF3BO15066 747 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 CDC45O75419 566 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 GSPT1P15170 499 aaKnown RBP9.74□□□□□ -0.85
VRK2-203ENST00000417641 NUCB2P80303 420 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 RBM10P98175 930 aaKnown RBP9.74□□□□□ -0.85
VRK2-203ENST00000417641 RABEP1Q15276 862 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
VRK2-203ENST00000417641 MCM5P33992 734 aa9.73□□□□□ -0.85
VRK2-203ENST00000417641 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
VRK2-203ENST00000417641 ARHGAP45Q92619 1136 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms