RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 USP21Q9UK80 565 aa20.05■□□□□ 0.8
SLC13A3-205ENST00000417157 RXRBP28702 533 aa20.04■□□□□ 0.8
SLC13A3-205ENST00000417157 CABP1Q9NZU7 370 aa20.03■□□□□ 0.8
SLC13A3-205ENST00000417157 ABCA3Q99758 1704 aa20.02■□□□□ 0.8
SLC13A3-205ENST00000417157 TRPC5Q9UL62 973 aaPredicted RBP20.02■□□□□ 0.8
SLC13A3-205ENST00000417157 CDK12Q9NYV4 1490 aaPredicted RBP20.02■□□□□ 0.8
SLC13A3-205ENST00000417157 CABLES1Q8TDN4 633 aa20.01■□□□□ 0.79
SLC13A3-205ENST00000417157 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
SLC13A3-205ENST00000417157 USP6P35125 1406 aa20.01■□□□□ 0.79
SLC13A3-205ENST00000417157 USP47Q96K76 1375 aa20■□□□□ 0.79
SLC13A3-205ENST00000417157 PLEKHG5O94827 1062 aa20■□□□□ 0.79
SLC13A3-205ENST00000417157 RBM6P78332 1123 aaKnown RBP20■□□□□ 0.79
SLC13A3-205ENST00000417157 SLIT2O94813 1529 aa19.99■□□□□ 0.79
SLC13A3-205ENST00000417157 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
SLC13A3-205ENST00000417157 ZNF692Q9BU19 519 aaPredicted RBP19.99■□□□□ 0.79
SLC13A3-205ENST00000417157 ST20-MTHFSA0A0A6YYL1 179 aa19.98■□□□□ 0.79
SLC13A3-205ENST00000417157 ABTB2Q8N961 1025 aa19.98■□□□□ 0.79
SLC13A3-205ENST00000417157 BCL9LQ86UU0 1499 aa19.98■□□□□ 0.79
SLC13A3-205ENST00000417157 ATRNO75882 1429 aa19.97■□□□□ 0.79
SLC13A3-205ENST00000417157 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.96■□□□□ 0.79
SLC13A3-205ENST00000417157 UNC5CLQ8IV45 518 aa19.96■□□□□ 0.79
SLC13A3-205ENST00000417157 NLRP13Q86W25 1043 aa19.95■□□□□ 0.78
SLC13A3-205ENST00000417157 TESK2Q96S53 571 aa19.95■□□□□ 0.78
SLC13A3-205ENST00000417157 CRYBG1Q9Y4K1 1723 aa19.95■□□□□ 0.78
SLC13A3-205ENST00000417157 NINLQ9Y2I6 1382 aa19.95■□□□□ 0.78
SLC13A3-205ENST00000417157 NWD2Q9ULI1 1742 aa19.94■□□□□ 0.78
SLC13A3-205ENST00000417157 PLCH1Q4KWH8 1693 aa19.94■□□□□ 0.78
SLC13A3-205ENST00000417157 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
SLC13A3-205ENST00000417157 TMF1P82094 1093 aa19.93■□□□□ 0.78
SLC13A3-205ENST00000417157 PHRF1Q9P1Y6 1649 aaKnown RBP19.93■□□□□ 0.78
SLC13A3-205ENST00000417157 KTN1Q86UP2 1357 aaKnown RBP19.93■□□□□ 0.78
SLC13A3-205ENST00000417157 COL14A1Q05707 1796 aaKnown RBP19.93■□□□□ 0.78
SLC13A3-205ENST00000417157 NUTM2GQ5VZR2 741 aa19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 TMC1Q8TDI8 760 aa19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 PRDM11Q9NQV5 511 aa19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 USP19O94966 1318 aa19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 TTC21AQ8NDW8 1320 aa19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 SSH2Q76I76 1423 aa19.92■□□□□ 0.78
SLC13A3-205ENST00000417157 CDCA8Q53HL2 280 aa19.91■□□□□ 0.78
SLC13A3-205ENST00000417157 TERF2IPQ9NYB0 399 aa19.91■□□□□ 0.78
SLC13A3-205ENST00000417157 RGS12O14924 1447 aa19.91■□□□□ 0.78
SLC13A3-205ENST00000417157 NRKQ7Z2Y5 1582 aa19.91■□□□□ 0.78
SLC13A3-205ENST00000417157 AKAP12Q02952 1782 aa19.9■□□□□ 0.78
SLC13A3-205ENST00000417157 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
SLC13A3-205ENST00000417157 GJD4Q96KN9 370 aaPredicted RBP19.9■□□□□ 0.78
SLC13A3-205ENST00000417157 NLRP6P59044 892 aa19.89■□□□□ 0.77
SLC13A3-205ENST00000417157 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
SLC13A3-205ENST00000417157 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
SLC13A3-205ENST00000417157 VPS72Q15906 364 aa19.88■□□□□ 0.77
SLC13A3-205ENST00000417157 BTG4Q9NY30 223 aa19.88■□□□□ 0.77
SLC13A3-205ENST00000417157 MON2Q7Z3U7 1717 aa19.88■□□□□ 0.77
SLC13A3-205ENST00000417157 CPDO75976 1380 aa19.87■□□□□ 0.77
SLC13A3-205ENST00000417157 CCDC9Q9Y3X0 531 aaKnown RBP19.86■□□□□ 0.77
SLC13A3-205ENST00000417157 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
SLC13A3-205ENST00000417157 SLIT3O75094 1523 aa19.86■□□□□ 0.77
SLC13A3-205ENST00000417157 CD163L1Q9NR16 1453 aa19.86■□□□□ 0.77
SLC13A3-205ENST00000417157 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
SLC13A3-205ENST00000417157 GCP02774 474 aa19.85■□□□□ 0.77
SLC13A3-205ENST00000417157 ZC3H6P61129 1189 aaKnown RBP19.85■□□□□ 0.77
SLC13A3-205ENST00000417157 SLC12A5Q9H2X9 1139 aa19.85■□□□□ 0.77
SLC13A3-205ENST00000417157 A0A1W2PP64 1363 aa19.84■□□□□ 0.77
SLC13A3-205ENST00000417157 KCNH5Q8NCM2 988 aa19.84■□□□□ 0.77
SLC13A3-205ENST00000417157 NRAPQ86VF7 1730 aa19.84■□□□□ 0.77
SLC13A3-205ENST00000417157 GLI3P10071 1580 aa19.83■□□□□ 0.76
SLC13A3-205ENST00000417157 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.762e-8■■■■■ 35.8
SLC13A3-205ENST00000417157 CHRNA2Q15822 529 aa19.81■□□□□ 0.76
SLC13A3-205ENST00000417157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.81■□□□□ 0.76
SLC13A3-205ENST00000417157 ANKRD36BQ8N2N9 1353 aa19.81■□□□□ 0.76
SLC13A3-205ENST00000417157 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
SLC13A3-205ENST00000417157 EVA1CP58658 441 aa19.77■□□□□ 0.76
SLC13A3-205ENST00000417157 STRN4Q9NRL3 753 aa19.77■□□□□ 0.76
SLC13A3-205ENST00000417157 AATKQ6ZMQ8 1374 aa19.77■□□□□ 0.76
SLC13A3-205ENST00000417157 USP54Q70EL1 1684 aa19.77■□□□□ 0.76
SLC13A3-205ENST00000417157 LMO7Q8WWI1 1683 aa19.77■□□□□ 0.76
SLC13A3-205ENST00000417157 SPATA31A5Q5VU36 1347 aa19.76■□□□□ 0.75
SLC13A3-205ENST00000417157 SPATA31A7Q8IWB4 1347 aa19.76■□□□□ 0.75
SLC13A3-205ENST00000417157 A0A0G2JS52 829 aa19.75■□□□□ 0.75
SLC13A3-205ENST00000417157 ZBTB7CA1YPR0 619 aa19.75■□□□□ 0.75
SLC13A3-205ENST00000417157 ONECUT3O60422 494 aaPredicted RBP19.75■□□□□ 0.75
SLC13A3-205ENST00000417157 MYT1Q01538 1121 aa19.75■□□□□ 0.75
SLC13A3-205ENST00000417157 NME9Q86XW9 330 aa19.75■□□□□ 0.75
SLC13A3-205ENST00000417157 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
SLC13A3-205ENST00000417157 ABCC6O95255 1503 aa19.74■□□□□ 0.75
SLC13A3-205ENST00000417157 CAMTA1Q9Y6Y1 1673 aa19.74■□□□□ 0.75
SLC13A3-205ENST00000417157 COL5A2P05997 1499 aaPredicted RBP19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 NFAT5O94916 1531 aa19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 HSPA5P11021 654 aaKnown RBP19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 UPF1Q92900 1129 aaKnown RBP eCLIP19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 OVOS2A0A0J9YW53 1432 aa19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 OVOS2Q6IE36 1432 aa19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 SPATA31A1Q5TZJ5 1347 aa19.73■□□□□ 0.75
SLC13A3-205ENST00000417157 SOX12O15370 315 aa19.72■□□□□ 0.75
SLC13A3-205ENST00000417157 FAM98CQ17RN3 349 aaKnown RBP19.72■□□□□ 0.75
SLC13A3-205ENST00000417157 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
SLC13A3-205ENST00000417157 COG3Q96JB2 828 aa19.71■□□□□ 0.75
SLC13A3-205ENST00000417157 CRB1P82279 1406 aa19.69■□□□□ 0.74
SLC13A3-205ENST00000417157 THRAP3Q9Y2W1 955 aaKnown RBP19.69■□□□□ 0.74
SLC13A3-205ENST00000417157 MYOM1P52179 1685 aa19.68■□□□□ 0.74
SLC13A3-205ENST00000417157 LARP1Q6PKG0 1096 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms