RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
CHEK2-210ENST00000416671 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHEK2-210ENST00000416671 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
CHEK2-210ENST00000416671 BCAR3O75815 825 aa17.61■□□□□ 0.41
CHEK2-210ENST00000416671 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
CHEK2-210ENST00000416671 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
CHEK2-210ENST00000416671 TXNDC2Q86VQ3 553 aa17.61■□□□□ 0.41
CHEK2-210ENST00000416671 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
CHEK2-210ENST00000416671 PUS7Q96PZ0 661 aaKnown RBP17.61■□□□□ 0.41
CHEK2-210ENST00000416671 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
CHEK2-210ENST00000416671 SEC24BO95487 1268 aa17.6■□□□□ 0.41
CHEK2-210ENST00000416671 ANTXR1Q9H6X2 564 aa17.6■□□□□ 0.41
CHEK2-210ENST00000416671 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
CHEK2-210ENST00000416671 GOLGA6L3A6NEY3 463 aa17.6■□□□□ 0.41
CHEK2-210ENST00000416671 CDK19Q9BWU1 502 aa17.6■□□□□ 0.41
CHEK2-210ENST00000416671 XRCC6P12956 609 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHEK2-210ENST00000416671 CLCN1P35523 988 aa17.59■□□□□ 0.41
CHEK2-210ENST00000416671 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
CHEK2-210ENST00000416671 E9PSI1 815 aa17.59■□□□□ 0.41
CHEK2-210ENST00000416671 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
CHEK2-210ENST00000416671 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
CHEK2-210ENST00000416671 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
CHEK2-210ENST00000416671 IGHDP01880 384 aa17.58■□□□□ 0.41
CHEK2-210ENST00000416671 CABP1Q9NZU7 370 aa17.58■□□□□ 0.41
CHEK2-210ENST00000416671 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.41
CHEK2-210ENST00000416671 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
CHEK2-210ENST00000416671 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.4
CHEK2-210ENST00000416671 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
CHEK2-210ENST00000416671 CFAP53Q96M91 514 aa17.58■□□□□ 0.4
CHEK2-210ENST00000416671 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
CHEK2-210ENST00000416671 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
CHEK2-210ENST00000416671 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHEK2-210ENST00000416671 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
CHEK2-210ENST00000416671 ARXQ96QS3 562 aa17.57■□□□□ 0.4
CHEK2-210ENST00000416671 FYB1O15117 783 aa17.56■□□□□ 0.4
CHEK2-210ENST00000416671 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
CHEK2-210ENST00000416671 ABCC11Q96J66 1382 aa17.56■□□□□ 0.4
CHEK2-210ENST00000416671 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
CHEK2-210ENST00000416671 RRP9O43818 475 aaKnown RBP17.56■□□□□ 0.4
CHEK2-210ENST00000416671 ATAD2Q6PL18 1390 aa17.55■□□□□ 0.4
CHEK2-210ENST00000416671 CD163L1Q9NR16 1453 aa17.55■□□□□ 0.4
CHEK2-210ENST00000416671 FBLN1P23142 703 aa17.55■□□□□ 0.4
CHEK2-210ENST00000416671 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
CHEK2-210ENST00000416671 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
CHEK2-210ENST00000416671 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
CHEK2-210ENST00000416671 NSD2O96028 1365 aa17.54■□□□□ 0.4
CHEK2-210ENST00000416671 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
CHEK2-210ENST00000416671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHEK2-210ENST00000416671 ADAMTS13Q76LX8 1427 aa17.53■□□□□ 0.4
CHEK2-210ENST00000416671 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
CHEK2-210ENST00000416671 EID1Q9Y6B2 187 aa17.52■□□□□ 0.4
CHEK2-210ENST00000416671 THEMISQ8N1K5 641 aaPredicted RBP17.52■□□□□ 0.39
CHEK2-210ENST00000416671 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.39
CHEK2-210ENST00000416671 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
CHEK2-210ENST00000416671 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
CHEK2-210ENST00000416671 IQSEC2Q5JU85 1478 aa17.51■□□□□ 0.39
CHEK2-210ENST00000416671 ADAMTSL3P82987 1691 aa17.51■□□□□ 0.39
CHEK2-210ENST00000416671 MCM4P33991 863 aa17.5■□□□□ 0.39
CHEK2-210ENST00000416671 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
CHEK2-210ENST00000416671 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
CHEK2-210ENST00000416671 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
CHEK2-210ENST00000416671 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
CHEK2-210ENST00000416671 PLEKHG1Q9ULL1 1385 aa17.5■□□□□ 0.39
CHEK2-210ENST00000416671 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
CHEK2-210ENST00000416671 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
CHEK2-210ENST00000416671 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
CHEK2-210ENST00000416671 MRE11P49959 708 aa17.48■□□□□ 0.39
CHEK2-210ENST00000416671 ARHGAP23Q9P227 1491 aa17.48■□□□□ 0.39
CHEK2-210ENST00000416671 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
CHEK2-210ENST00000416671 SLIT1O75093 1534 aa17.47■□□□□ 0.39
CHEK2-210ENST00000416671 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
CHEK2-210ENST00000416671 CEP170BQ9Y4F5 1589 aaPredicted RBP17.47■□□□□ 0.39
CHEK2-210ENST00000416671 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
CHEK2-210ENST00000416671 PTPRUQ92729 1446 aa17.46■□□□□ 0.39
CHEK2-210ENST00000416671 PANK1Q8TE04 598 aa17.46■□□□□ 0.39
CHEK2-210ENST00000416671 DLC1Q96QB1 1528 aa17.45■□□□□ 0.38
CHEK2-210ENST00000416671 TRAK2O60296 914 aa17.45■□□□□ 0.38
CHEK2-210ENST00000416671 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
CHEK2-210ENST00000416671 SPRYD3Q8NCJ5 442 aa17.44■□□□□ 0.38
CHEK2-210ENST00000416671 TNNQ9UQP3 1299 aa17.44■□□□□ 0.38
CHEK2-210ENST00000416671 NUTM2FA1L443 756 aa17.44■□□□□ 0.38
CHEK2-210ENST00000416671 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 PMFBP1Q8TBY8 1022 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
CHEK2-210ENST00000416671 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
CHEK2-210ENST00000416671 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
CHEK2-210ENST00000416671 CHMP5Q9NZZ3 219 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 AMOTL2Q9Y2J4 779 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 MED14O60244 1454 aa17.43■□□□□ 0.38
CHEK2-210ENST00000416671 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
CHEK2-210ENST00000416671 ESPNB1AK53 854 aa17.42■□□□□ 0.38
CHEK2-210ENST00000416671 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
CHEK2-210ENST00000416671 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
CHEK2-210ENST00000416671 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
CHEK2-210ENST00000416671 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
CHEK2-210ENST00000416671 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
CHEK2-210ENST00000416671 NME9Q86XW9 330 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms