RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 PIP4K2BP78356 416 aa11.1□□□□□ -0.63
RBM39-209ENST00000416529 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
RBM39-209ENST00000416529 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
RBM39-209ENST00000416529 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
RBM39-209ENST00000416529 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
RBM39-209ENST00000416529 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
RBM39-209ENST00000416529 LTBP4Q8N2S1 1624 aa11.09□□□□□ -0.63
RBM39-209ENST00000416529 MMRN1Q13201 1228 aa11.09□□□□□ -0.63
RBM39-209ENST00000416529 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
RBM39-209ENST00000416529 PIK3R4Q99570 1358 aa11.08□□□□□ -0.64
RBM39-209ENST00000416529 MYOM2P54296 1465 aa11.07□□□□□ -0.64
RBM39-209ENST00000416529 SCAF11Q99590 1463 aaKnown RBP11.07□□□□□ -0.64
RBM39-209ENST00000416529 PLEKHG1Q9ULL1 1385 aa11.07□□□□□ -0.64
RBM39-209ENST00000416529 PPP1R37O75864 691 aa11.07□□□□□ -0.64
RBM39-209ENST00000416529 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
RBM39-209ENST00000416529 RIMS2Q9UQ26 1411 aa11.06□□□□□ -0.64
RBM39-209ENST00000416529 DIP2AQ14689 1571 aa11.06□□□□□ -0.64
RBM39-209ENST00000416529 IQSEC2Q5JU85 1478 aa11.06□□□□□ -0.64
RBM39-209ENST00000416529 POLR1AO95602 1720 aaPredicted RBP11.05□□□□□ -0.64
RBM39-209ENST00000416529 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
RBM39-209ENST00000416529 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
RBM39-209ENST00000416529 ZNF326Q5BKZ1 582 aaKnown RBP11.04□□□□□ -0.64
RBM39-209ENST00000416529 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
RBM39-209ENST00000416529 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
RBM39-209ENST00000416529 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
RBM39-209ENST00000416529 HSPA1LP34931 641 aa11.03□□□□□ -0.64
RBM39-209ENST00000416529 CCER1Q8TC90 406 aaPredicted RBP11.03□□□□□ -0.64
RBM39-209ENST00000416529 NRXN1Q9ULB1 1477 aa11.03□□□□□ -0.64
RBM39-209ENST00000416529 PPLO60437 1756 aa11.03□□□□□ -0.64
RBM39-209ENST00000416529 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
RBM39-209ENST00000416529 LAMC1P11047 1609 aa11.02□□□□□ -0.64
RBM39-209ENST00000416529 NPHP4O75161 1426 aaPredicted RBP11.02□□□□□ -0.64
RBM39-209ENST00000416529 IFT172Q9UG01 1749 aa11.02□□□□□ -0.65
RBM39-209ENST00000416529 PPP1R15AO75807 674 aaPredicted RBP11.02□□□□□ -0.65
RBM39-209ENST00000416529 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
RBM39-209ENST00000416529 TONSLQ96HA7 1378 aa11.02□□□□□ -0.65
RBM39-209ENST00000416529 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
RBM39-209ENST00000416529 FOXK1P85037 733 aa11.01□□□□□ -0.65
RBM39-209ENST00000416529 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
RBM39-209ENST00000416529 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
RBM39-209ENST00000416529 PSDA5PKW4 1024 aaPredicted RBP11□□□□□ -0.65
RBM39-209ENST00000416529 PTGER2P43116 358 aa11□□□□□ -0.65
RBM39-209ENST00000416529 IQGAP1P46940 1657 aa11□□□□□ -0.65
RBM39-209ENST00000416529 KIAA1210Q9ULL0 1709 aa11□□□□□ -0.65
RBM39-209ENST00000416529 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
RBM39-209ENST00000416529 LTKP29376 864 aa10.99□□□□□ -0.65
RBM39-209ENST00000416529 SIRT1Q96EB6 747 aa10.99□□□□□ -0.65
RBM39-209ENST00000416529 PIK3C2GO75747 1445 aa10.99□□□□□ -0.65
RBM39-209ENST00000416529 NCOA3Q9Y6Q9 1424 aa10.99□□□□□ -0.65
RBM39-209ENST00000416529 TBC1D12O60347 775 aa10.98□□□□□ -0.65
RBM39-209ENST00000416529 PBX2P40425 430 aa10.98□□□□□ -0.65
RBM39-209ENST00000416529 C14orf93Q9H972 538 aaKnown RBP10.98□□□□□ -0.65
RBM39-209ENST00000416529 NUDT7P0C024 238 aa10.97□□□□□ -0.65
RBM39-209ENST00000416529 ZEB1P37275 1124 aaPredicted RBP10.97□□□□□ -0.65
RBM39-209ENST00000416529 NKX1-1Q15270 411 aaPredicted RBP10.97□□□□□ -0.65
RBM39-209ENST00000416529 RGL3Q3MIN7 710 aa10.97□□□□□ -0.65
RBM39-209ENST00000416529 DCAF11Q8TEB1 546 aa10.97□□□□□ -0.65
RBM39-209ENST00000416529 TOM1O60784 492 aa10.96□□□□□ -0.65
RBM39-209ENST00000416529 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
RBM39-209ENST00000416529 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
RBM39-209ENST00000416529 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.655e-25■■■■□ 20.4
RBM39-209ENST00000416529 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.65
RBM39-209ENST00000416529 CPS1P31327 1500 aa10.95□□□□□ -0.66
RBM39-209ENST00000416529 ADAMTS13Q76LX8 1427 aa10.95□□□□□ -0.66
RBM39-209ENST00000416529 KCNA6P17658 529 aa10.95□□□□□ -0.66
RBM39-209ENST00000416529 NKTRP30414 1462 aaKnown RBP10.94□□□□□ -0.66
RBM39-209ENST00000416529 SIN3AQ96ST3 1273 aa10.94□□□□□ -0.66
RBM39-209ENST00000416529 TECPR2O15040 1411 aa10.93□□□□□ -0.66
RBM39-209ENST00000416529 GPRASP1Q5JY77 1395 aa10.93□□□□□ -0.66
RBM39-209ENST00000416529 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
RBM39-209ENST00000416529 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
RBM39-209ENST00000416529 ALKQ9UM73 1620 aa10.93□□□□□ -0.66
RBM39-209ENST00000416529 ADGRF5Q8IZF2 1346 aa10.92□□□□□ -0.66
RBM39-209ENST00000416529 NWD1Q149M9 1564 aa10.92□□□□□ -0.66
RBM39-209ENST00000416529 BCANQ96GW7 911 aa10.92□□□□□ -0.66
RBM39-209ENST00000416529 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
RBM39-209ENST00000416529 CHD2O14647 1828 aaKnown RBP10.92□□□□□ -0.66
RBM39-209ENST00000416529 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
RBM39-209ENST00000416529 FAM135BQ49AJ0 1406 aa10.92□□□□□ -0.66
RBM39-209ENST00000416529 LRPPRCP42704 1394 aaKnown RBP10.91□□□□□ -0.66
RBM39-209ENST00000416529 NRXN3Q9Y4C0 1643 aa10.91□□□□□ -0.66
RBM39-209ENST00000416529 DLC1Q96QB1 1528 aa10.91□□□□□ -0.66
RBM39-209ENST00000416529 DSG2Q14126 1118 aa10.91□□□□□ -0.66
RBM39-209ENST00000416529 PDE4AP27815 886 aa10.9□□□□□ -0.66
RBM39-209ENST00000416529 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.67
RBM39-209ENST00000416529 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
RBM39-209ENST00000416529 RALGAPBQ86X10 1494 aa10.89□□□□□ -0.67
RBM39-209ENST00000416529 KNDC1Q76NI1 1749 aa10.89□□□□□ -0.67
RBM39-209ENST00000416529 ADGRB1O14514 1584 aa10.88□□□□□ -0.67
RBM39-209ENST00000416529 LSM11P83369 360 aaKnown RBP eCLIP10.88□□□□□ -0.671e-13■□□□□ 8.6
RBM39-209ENST00000416529 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
RBM39-209ENST00000416529 CRISPLD2Q9H0B8 497 aa10.88□□□□□ -0.67
RBM39-209ENST00000416529 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
RBM39-209ENST00000416529 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
RBM39-209ENST00000416529 DCCP43146 1447 aa10.87□□□□□ -0.67
RBM39-209ENST00000416529 ANKRD13DQ6ZTN6 518 aa10.87□□□□□ -0.67
RBM39-209ENST00000416529 TRPM1Q7Z4N2 1603 aa10.87□□□□□ -0.67
RBM39-209ENST00000416529 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
RBM39-209ENST00000416529 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
RBM39-209ENST00000416529 CFAP70Q5T0N1 1121 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms