RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 HAP1P54257 671 aaPredicted RBP31.24■■■□□ 2.59
HMG20B-203ENST00000416526 CARD11Q9BXL7 1154 aa31.24■■■□□ 2.59
HMG20B-203ENST00000416526 TRPC5Q9UL62 973 aaPredicted RBP31.24■■■□□ 2.59
HMG20B-203ENST00000416526 SLIT2O94813 1529 aa31.24■■■□□ 2.59
HMG20B-203ENST00000416526 CRYBG1Q9Y4K1 1723 aa31.22■■■□□ 2.59
HMG20B-203ENST00000416526 EVC2Q86UK5 1308 aa31.22■■■□□ 2.59
HMG20B-203ENST00000416526 RGS12O14924 1447 aa31.21■■■□□ 2.59
HMG20B-203ENST00000416526 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.2■■■□□ 2.58
HMG20B-203ENST00000416526 PLCH1Q4KWH8 1693 aa31.17■■■□□ 2.58
HMG20B-203ENST00000416526 CABP1Q9NZU7 370 aa31.17■■■□□ 2.58
HMG20B-203ENST00000416526 UNC5CLQ8IV45 518 aa31.16■■■□□ 2.58
HMG20B-203ENST00000416526 SBNO2Q9Y2G9 1366 aa31.16■■■□□ 2.58
HMG20B-203ENST00000416526 FAM83GA6ND36 823 aa31.15■■■□□ 2.58
HMG20B-203ENST00000416526 NWD2Q9ULI1 1742 aa31.13■■■□□ 2.57
HMG20B-203ENST00000416526 NUTM2GQ5VZR2 741 aa31.12■■■□□ 2.57
HMG20B-203ENST00000416526 PHRF1Q9P1Y6 1649 aaKnown RBP31.11■■■□□ 2.57
HMG20B-203ENST00000416526 GJD4Q96KN9 370 aaPredicted RBP31.1■■■□□ 2.57
HMG20B-203ENST00000416526 CLSPNQ9HAW4 1339 aa31.09■■■□□ 2.57
HMG20B-203ENST00000416526 GLI3P10071 1580 aa31.09■■■□□ 2.57
HMG20B-203ENST00000416526 USP6P35125 1406 aa31.08■■■□□ 2.57
HMG20B-203ENST00000416526 COL14A1Q05707 1796 aaKnown RBP31.07■■■□□ 2.56
HMG20B-203ENST00000416526 ABTB2Q8N961 1025 aa31.07■■■□□ 2.56
HMG20B-203ENST00000416526 NRAPQ86VF7 1730 aa31.06■■■□□ 2.56
HMG20B-203ENST00000416526 BRD4O60885 1362 aaPredicted RBP31.05■■■□□ 2.56
HMG20B-203ENST00000416526 SSH2Q76I76 1423 aa31.05■■■□□ 2.56
HMG20B-203ENST00000416526 ATAD2Q6PL18 1390 aa31.05■■■□□ 2.56
HMG20B-203ENST00000416526 VPS72Q15906 364 aa31.04■■■□□ 2.56
HMG20B-203ENST00000416526 UPF1Q92900 1129 aaKnown RBP eCLIP31.03■■■□□ 2.56
HMG20B-203ENST00000416526 BTG4Q9NY30 223 aa31.03■■■□□ 2.56
HMG20B-203ENST00000416526 AKAP12Q02952 1782 aa31.02■■■□□ 2.56
HMG20B-203ENST00000416526 KIAA0232Q92628 1395 aa31.02■■■□□ 2.56
HMG20B-203ENST00000416526 USP19O94966 1318 aa31.01■■■□□ 2.56
HMG20B-203ENST00000416526 NRKQ7Z2Y5 1582 aa31.01■■■□□ 2.56
HMG20B-203ENST00000416526 PRDM11Q9NQV5 511 aa31.01■■■□□ 2.55
HMG20B-203ENST00000416526 ST20-MTHFSA0A0A6YYL1 179 aa31■■■□□ 2.55
HMG20B-203ENST00000416526 TESK2Q96S53 571 aa31■■■□□ 2.55
HMG20B-203ENST00000416526 TIMELESSQ9UNS1 1208 aa31■■■□□ 2.55
HMG20B-203ENST00000416526 CPSF1Q10570 1443 aaKnown RBP30.99■■■□□ 2.55
HMG20B-203ENST00000416526 ZC3H6P61129 1189 aaKnown RBP30.98■■■□□ 2.55
HMG20B-203ENST00000416526 PIK3C2AO00443 1686 aa30.97■■■□□ 2.55
HMG20B-203ENST00000416526 CHRNA2Q15822 529 aa30.97■■■□□ 2.55
HMG20B-203ENST00000416526 NLRP13Q86W25 1043 aa30.97■■■□□ 2.55
HMG20B-203ENST00000416526 ZNF692Q9BU19 519 aaPredicted RBP30.96■■■□□ 2.55
HMG20B-203ENST00000416526 CCDC9Q9Y3X0 531 aaKnown RBP30.94■■■□□ 2.54
HMG20B-203ENST00000416526 CD163L1Q9NR16 1453 aa30.94■■■□□ 2.54
HMG20B-203ENST00000416526 TTC21BQ7Z4L5 1316 aa30.94■■■□□ 2.54
HMG20B-203ENST00000416526 GCP02774 474 aa30.93■■■□□ 2.54
HMG20B-203ENST00000416526 MON2Q7Z3U7 1717 aa30.93■■■□□ 2.54
HMG20B-203ENST00000416526 USP47Q96K76 1375 aa30.92■■■□□ 2.54
HMG20B-203ENST00000416526 NLRP6P59044 892 aa30.92■■■□□ 2.54
HMG20B-203ENST00000416526 CPDO75976 1380 aa30.92■■■□□ 2.54
HMG20B-203ENST00000416526 KTN1Q86UP2 1357 aaKnown RBP30.92■■■□□ 2.54
HMG20B-203ENST00000416526 CCER1Q8TC90 406 aaPredicted RBP30.91■■■□□ 2.54
HMG20B-203ENST00000416526 PUS7Q96PZ0 661 aaKnown RBP30.91■■■□□ 2.54
HMG20B-203ENST00000416526 SLIT3O75094 1523 aa30.91■■■□□ 2.54
HMG20B-203ENST00000416526 ONECUT3O60422 494 aaPredicted RBP30.9■■■□□ 2.54
HMG20B-203ENST00000416526 SLC12A5Q9H2X9 1139 aa30.9■■■□□ 2.54
HMG20B-203ENST00000416526 BRWD3Q6RI45 1802 aa30.89■■■□□ 2.54
HMG20B-203ENST00000416526 TMC1Q8TDI8 760 aa30.89■■■□□ 2.54
HMG20B-203ENST00000416526 SEPT12Q8IYM1 358 aa30.88■■■□□ 2.53
HMG20B-203ENST00000416526 LMO7Q8WWI1 1683 aa30.87■■■□□ 2.53
HMG20B-203ENST00000416526 SPATA31A5Q5VU36 1347 aa30.87■■■□□ 2.53
HMG20B-203ENST00000416526 SPATA31A7Q8IWB4 1347 aa30.87■■■□□ 2.53
HMG20B-203ENST00000416526 TTC21AQ8NDW8 1320 aa30.87■■■□□ 2.53
HMG20B-203ENST00000416526 CAMTA1Q9Y6Y1 1673 aa30.87■■■□□ 2.53
HMG20B-203ENST00000416526 EP400Q96L91 3159 aa30.85■■■□□ 2.53
HMG20B-203ENST00000416526 FAM98CQ17RN3 349 aaKnown RBP30.83■■■□□ 2.53
HMG20B-203ENST00000416526 STRN4Q9NRL3 753 aa30.83■■■□□ 2.53
HMG20B-203ENST00000416526 SLC24A1O60721 1099 aa30.82■■■□□ 2.52
HMG20B-203ENST00000416526 A0A1W2PP64 1363 aa30.81■■■□□ 2.52
HMG20B-203ENST00000416526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.81■■■□□ 2.52
HMG20B-203ENST00000416526 HDGFL2Q7Z4V5 671 aaPredicted RBP30.8■■■□□ 2.52
HMG20B-203ENST00000416526 SPATA31A1Q5TZJ5 1347 aa30.79■■■□□ 2.52
HMG20B-203ENST00000416526 ZRANB1Q9UGI0 708 aa30.79■■■□□ 2.52
HMG20B-203ENST00000416526 TERF2IPQ9NYB0 399 aa30.78■■■□□ 2.52
HMG20B-203ENST00000416526 NINLQ9Y2I6 1382 aa30.77■■■□□ 2.52
HMG20B-203ENST00000416526 COL18A1P39060 1754 aa30.77■■■□□ 2.52
HMG20B-203ENST00000416526 EDC4Q6P2E9 1401 aaKnown RBP30.76■■■□□ 2.51
HMG20B-203ENST00000416526 ZBTB7CA1YPR0 619 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 EVA1CP58658 441 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 TMF1P82094 1093 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 NME9Q86XW9 330 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 USP54Q70EL1 1684 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 THSD7AQ9UPZ6 1657 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 AATKQ6ZMQ8 1374 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 USP31Q70CQ4 1352 aa30.76■■■□□ 2.51
HMG20B-203ENST00000416526 COL5A2P05997 1499 aaPredicted RBP30.76■■■□□ 2.51
HMG20B-203ENST00000416526 LARP1Q6PKG0 1096 aaKnown RBP30.75■■■□□ 2.51
HMG20B-203ENST00000416526 NFAT5O94916 1531 aa30.74■■■□□ 2.51
HMG20B-203ENST00000416526 A0A0G2JS52 829 aa30.74■■■□□ 2.51
HMG20B-203ENST00000416526 MYT1Q01538 1121 aa30.74■■■□□ 2.51
HMG20B-203ENST00000416526 KRT27Q7Z3Y8 459 aa30.74■■■□□ 2.51
HMG20B-203ENST00000416526 SOX12O15370 315 aa30.73■■■□□ 2.51
HMG20B-203ENST00000416526 ARHGEF25Q86VW2 580 aa30.73■■■□□ 2.51
HMG20B-203ENST00000416526 KCNH5Q8NCM2 988 aa30.73■■■□□ 2.51
HMG20B-203ENST00000416526 USP35Q9P2H5 1018 aa30.7■■■□□ 2.51
HMG20B-203ENST00000416526 AXIN2Q9Y2T1 843 aa30.7■■■□□ 2.51
HMG20B-203ENST00000416526 ANKRD36BQ8N2N9 1353 aa30.66■■■□□ 2.5
HMG20B-203ENST00000416526 BARGINQ6ZT62 677 aa30.66■■■□□ 2.5
HMG20B-203ENST00000416526 RGPD5Q99666 1765 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms