RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 FAM83GA6ND36 823 aa19.33■□□□□ 0.68
CPNE1-209ENST00000415920 POGKQ9P215 609 aa19.33■□□□□ 0.68
CPNE1-209ENST00000415920 ALS2Q96Q42 1657 aa19.33■□□□□ 0.68
CPNE1-209ENST00000415920 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.68
CPNE1-209ENST00000415920 TRAK1Q9UPV9 953 aa19.32■□□□□ 0.68
CPNE1-209ENST00000415920 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
CPNE1-209ENST00000415920 MINK1Q8N4C8 1332 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-209ENST00000415920 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
CPNE1-209ENST00000415920 GPRASP1Q5JY77 1395 aa19.31■□□□□ 0.68
CPNE1-209ENST00000415920 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
CPNE1-209ENST00000415920 CRYBG1Q9Y4K1 1723 aa19.3■□□□□ 0.68
CPNE1-209ENST00000415920 ONECUT3O60422 494 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-209ENST00000415920 TULP4Q9NRJ4 1543 aa19.28■□□□□ 0.68
CPNE1-209ENST00000415920 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
CPNE1-209ENST00000415920 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
CPNE1-209ENST00000415920 COL14A1Q05707 1796 aaKnown RBP19.26■□□□□ 0.67
CPNE1-209ENST00000415920 EIF3AQ14152 1382 aaKnown RBP19.25■□□□□ 0.67
CPNE1-209ENST00000415920 BTG4Q9NY30 223 aa19.25■□□□□ 0.67
CPNE1-209ENST00000415920 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
CPNE1-209ENST00000415920 USP47Q96K76 1375 aa19.23■□□□□ 0.67
CPNE1-209ENST00000415920 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-209ENST00000415920 A0A0G2JS52 829 aa19.22■□□□□ 0.67
CPNE1-209ENST00000415920 MYT1Q01538 1121 aa19.22■□□□□ 0.67
CPNE1-209ENST00000415920 FAM182BQ5T319 152 aa19.22■□□□□ 0.67
CPNE1-209ENST00000415920 ATP7BP35670 1465 aa19.22■□□□□ 0.67
CPNE1-209ENST00000415920 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
CPNE1-209ENST00000415920 THSD7AQ9UPZ6 1657 aa19.2■□□□□ 0.66
CPNE1-209ENST00000415920 PHRF1Q9P1Y6 1649 aaKnown RBP19.18■□□□□ 0.66
CPNE1-209ENST00000415920 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
CPNE1-209ENST00000415920 PSDA5PKW4 1024 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-209ENST00000415920 PAK3O75914 559 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-209ENST00000415920 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
CPNE1-209ENST00000415920 SPATA31A5Q5VU36 1347 aa19.18■□□□□ 0.66
CPNE1-209ENST00000415920 SPATA31A7Q8IWB4 1347 aa19.18■□□□□ 0.66
CPNE1-209ENST00000415920 LRP5O75197 1615 aa19.17■□□□□ 0.66
CPNE1-209ENST00000415920 TNS1Q9HBL0 1735 aaKnown RBP19.17■□□□□ 0.66
CPNE1-209ENST00000415920 TOPAZ1Q8N9V7 1692 aa19.16■□□□□ 0.66
CPNE1-209ENST00000415920 RGPD1P0DJD0 1748 aa19.16■□□□□ 0.66
CPNE1-209ENST00000415920 CHRNA2Q15822 529 aa19.15■□□□□ 0.66
CPNE1-209ENST00000415920 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
CPNE1-209ENST00000415920 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
CPNE1-209ENST00000415920 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-209ENST00000415920 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
CPNE1-209ENST00000415920 EN1Q05925 392 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-209ENST00000415920 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
CPNE1-209ENST00000415920 BAG6P46379 1132 aa19.12■□□□□ 0.65
CPNE1-209ENST00000415920 EIF4G2P78344 907 aaKnown RBP eCLIP19.12■□□□□ 0.65
CPNE1-209ENST00000415920 CDK19Q9BWU1 502 aa19.12■□□□□ 0.65
CPNE1-209ENST00000415920 NRKQ7Z2Y5 1582 aa19.1■□□□□ 0.65
CPNE1-209ENST00000415920 SPATA31A1Q5TZJ5 1347 aa19.1■□□□□ 0.65
CPNE1-209ENST00000415920 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
CPNE1-209ENST00000415920 ZC3H6P61129 1189 aaKnown RBP19.1■□□□□ 0.65
CPNE1-209ENST00000415920 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
CPNE1-209ENST00000415920 POLR3AO14802 1390 aaPredicted RBP19.08■□□□□ 0.65
CPNE1-209ENST00000415920 SBNO2Q9Y2G9 1366 aa19.08■□□□□ 0.65
CPNE1-209ENST00000415920 ACEP12821 1306 aa19.08■□□□□ 0.65
CPNE1-209ENST00000415920 ST20-MTHFSA0A0A6YYL1 179 aa19.08■□□□□ 0.64
CPNE1-209ENST00000415920 MYOM1P52179 1685 aa19.07■□□□□ 0.64
CPNE1-209ENST00000415920 CAMTA1Q9Y6Y1 1673 aa19.07■□□□□ 0.64
CPNE1-209ENST00000415920 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
CPNE1-209ENST00000415920 LMO7Q8WWI1 1683 aa19.06■□□□□ 0.64
CPNE1-209ENST00000415920 EZH2Q15910 746 aaKnown RBP19.06■□□□□ 0.64
CPNE1-209ENST00000415920 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
CPNE1-209ENST00000415920 R3HDM1Q15032 1099 aaKnown RBP19.05■□□□□ 0.64
CPNE1-209ENST00000415920 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
CPNE1-209ENST00000415920 TRIM37O94972 964 aa19.04■□□□□ 0.64
CPNE1-209ENST00000415920 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
CPNE1-209ENST00000415920 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
CPNE1-209ENST00000415920 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
CPNE1-209ENST00000415920 CAMKK2Q96RR4 588 aa19.02■□□□□ 0.64
CPNE1-209ENST00000415920 USP19O94966 1318 aa19■□□□□ 0.63
CPNE1-209ENST00000415920 ABTB2Q8N961 1025 aa19■□□□□ 0.63
CPNE1-209ENST00000415920 TESK2Q96S53 571 aa19■□□□□ 0.63
CPNE1-209ENST00000415920 RREB1Q92766 1687 aa19■□□□□ 0.63
CPNE1-209ENST00000415920 PPIP5K1Q6PFW1 1433 aa19■□□□□ 0.63
CPNE1-209ENST00000415920 FAM196AQ6ZSG2 479 aa18.99■□□□□ 0.63
CPNE1-209ENST00000415920 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
CPNE1-209ENST00000415920 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
CPNE1-209ENST00000415920 EVC2Q86UK5 1308 aa18.99■□□□□ 0.63
CPNE1-209ENST00000415920 CPDO75976 1380 aa18.98■□□□□ 0.63
CPNE1-209ENST00000415920 EVA1CP58658 441 aa18.98■□□□□ 0.63
CPNE1-209ENST00000415920 TMF1P82094 1093 aa18.98■□□□□ 0.63
CPNE1-209ENST00000415920 BARGINQ6ZT62 677 aa18.98■□□□□ 0.63
CPNE1-209ENST00000415920 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
CPNE1-209ENST00000415920 APBA3O96018 575 aa18.97■□□□□ 0.63
CPNE1-209ENST00000415920 SRPK2P78362 688 aaKnown RBP18.97■□□□□ 0.63
CPNE1-209ENST00000415920 COL5A2P05997 1499 aaPredicted RBP18.97■□□□□ 0.63
CPNE1-209ENST00000415920 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
CPNE1-209ENST00000415920 GCP02774 474 aa18.95■□□□□ 0.62
CPNE1-209ENST00000415920 TCP11L2Q8N4U5 519 aa18.95■□□□□ 0.62
CPNE1-209ENST00000415920 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
CPNE1-209ENST00000415920 PDE3BQ13370 1112 aa18.94■□□□□ 0.62
CPNE1-209ENST00000415920 POLR3GLQ9BT43 218 aa18.94■□□□□ 0.62
CPNE1-209ENST00000415920 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
CPNE1-209ENST00000415920 USP6P35125 1406 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 SLIT3O75094 1523 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
CPNE1-209ENST00000415920 NLRP13Q86W25 1043 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms