RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
CTNND1-206ENST00000415361 RBM42Q9BTD8 480 aaKnown RBP10.3□□□□□ -0.76
CTNND1-206ENST00000415361 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
CTNND1-206ENST00000415361 CCDC61Q9Y6R9 512 aa10.3□□□□□ -0.76
CTNND1-206ENST00000415361 NOL8Q76FK4 1167 aaKnown RBP10.3□□□□□ -0.76
CTNND1-206ENST00000415361 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
CTNND1-206ENST00000415361 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
CTNND1-206ENST00000415361 DEKP35659 375 aaKnown RBP10.29□□□□□ -0.76
CTNND1-206ENST00000415361 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
CTNND1-206ENST00000415361 PLEKHO1Q53GL0 409 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-206ENST00000415361 A2MP01023 1474 aa10.29□□□□□ -0.76
CTNND1-206ENST00000415361 CPLX1O14810 134 aa10.29□□□□□ -0.76
CTNND1-206ENST00000415361 GZF1Q9H116 711 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-206ENST00000415361 AIMP1Q12904 312 aaKnown RBP10.29□□□□□ -0.76
CTNND1-206ENST00000415361 RRS1Q15050 365 aaKnown RBP10.29□□□□□ -0.76
CTNND1-206ENST00000415361 MAP3K1Q13233 1512 aa10.29□□□□□ -0.76
CTNND1-206ENST00000415361 PES1O00541 588 aaKnown RBP10.29□□□□□ -0.76
CTNND1-206ENST00000415361 BECN2A8MW95 431 aa10.28□□□□□ -0.76
CTNND1-206ENST00000415361 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
CTNND1-206ENST00000415361 ZBED9Q6R2W3 1325 aa10.28□□□□□ -0.76
CTNND1-206ENST00000415361 APPP05067 770 aa10.27□□□□□ -0.76
CTNND1-206ENST00000415361 PRKAR2BP31323 418 aa10.27□□□□□ -0.76
CTNND1-206ENST00000415361 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-206ENST00000415361 ATAD2Q6PL18 1390 aa10.27□□□□□ -0.76
CTNND1-206ENST00000415361 IPO7O95373 1038 aaKnown RBP10.27□□□□□ -0.77
CTNND1-206ENST00000415361 SULT6B1Q6IMI4 303 aa10.27□□□□□ -0.77
CTNND1-206ENST00000415361 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
CTNND1-206ENST00000415361 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-206ENST00000415361 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
CTNND1-206ENST00000415361 NOS1P29475 1434 aa10.27□□□□□ -0.77
CTNND1-206ENST00000415361 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
CTNND1-206ENST00000415361 CCDC43Q96MW1 224 aaKnown RBP10.27□□□□□ -0.77
CTNND1-206ENST00000415361 UBAP1LF5GYI3 381 aa10.27□□□□□ -0.77
CTNND1-206ENST00000415361 RRP1P56182 461 aaKnown RBP10.27□□□□□ -0.77
CTNND1-206ENST00000415361 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
CTNND1-206ENST00000415361 DHX16O60231 1041 aaKnown RBP10.26□□□□□ -0.77
CTNND1-206ENST00000415361 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTNND1-206ENST00000415361 GAS2L2Q8NHY3 880 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 FAM135AQ9P2D6 1515 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 FAM177BA6PVY3 158 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 MCTP1Q6DN14 999 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
CTNND1-206ENST00000415361 PPP2R1AP30153 589 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 GPS2Q13227 327 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 INTS3Q68E01 1043 aaKnown RBP10.25□□□□□ -0.77
CTNND1-206ENST00000415361 PLIN1O60240 522 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 BRMS1Q9HCU9 246 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 PPP1R1BQ9UD71 204 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-206ENST00000415361 CNTLNQ9NXG0 1405 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 RAD21O60216 631 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 ZNF530Q6P9A1 599 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-206ENST00000415361 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 NGLY1Q96IV0 654 aa10.25□□□□□ -0.77
CTNND1-206ENST00000415361 DISP1Q96F81 1524 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 XBP1P17861 261 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 CABP4P57796 275 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
CTNND1-206ENST00000415361 KRI1Q8N9T8 703 aaKnown RBP10.23□□□□□ -0.77
CTNND1-206ENST00000415361 WASLO00401 505 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-206ENST00000415361 SPG7Q9UQ90 795 aa10.23□□□□□ -0.77
CTNND1-206ENST00000415361 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
CTNND1-206ENST00000415361 PCMTD1Q96MG8 357 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-206ENST00000415361 ITSN2Q9NZM3 1697 aa10.23□□□□□ -0.77
CTNND1-206ENST00000415361 CADPS2Q86UW7 1296 aa10.23□□□□□ -0.77
CTNND1-206ENST00000415361 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
CTNND1-206ENST00000415361 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
CTNND1-206ENST00000415361 RALYLQ86SE5 291 aaKnown RBP10.22□□□□□ -0.77
CTNND1-206ENST00000415361 KRT28Q7Z3Y7 464 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 KCNH5Q8NCM2 988 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 HIP1O00291 1037 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 TOM1O60784 492 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 SLC3A2P08195 630 aaKnown RBP10.22□□□□□ -0.77
CTNND1-206ENST00000415361 PDE4CQ08493 712 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 PSMA5P28066 241 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 MSH6P52701 1360 aa10.22□□□□□ -0.77
CTNND1-206ENST00000415361 DUOX2Q9NRD8 1548 aa10.21□□□□□ -0.77
CTNND1-206ENST00000415361 CCDC30Q5VVM6 783 aa10.21□□□□□ -0.77
CTNND1-206ENST00000415361 NME9Q86XW9 330 aa10.21□□□□□ -0.77
CTNND1-206ENST00000415361 TBC1D2BQ9UPU7 963 aa10.21□□□□□ -0.77
CTNND1-206ENST00000415361 ZMYM3Q14202 1370 aa10.21□□□□□ -0.78
CTNND1-206ENST00000415361 UBTFL1P0CB47 393 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-206ENST00000415361 SETQ01105 290 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-206ENST00000415361 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.78
CTNND1-206ENST00000415361 PNISRQ8TF01 805 aaKnown RBP10.21□□□□□ -0.78
CTNND1-206ENST00000415361 CRBNQ96SW2 442 aa10.21□□□□□ -0.78
CTNND1-206ENST00000415361 NSD3Q9BZ95 1437 aa10.21□□□□□ -0.78
CTNND1-206ENST00000415361 GNAI3P08754 354 aa10.2□□□□□ -0.78
CTNND1-206ENST00000415361 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
CTNND1-206ENST00000415361 ERC1Q8IUD2 1116 aa10.2□□□□□ -0.78
CTNND1-206ENST00000415361 NUCB2P80303 420 aa10.2□□□□□ -0.78
CTNND1-206ENST00000415361 R3HCC1Q9Y3T6 440 aaKnown RBP10.2□□□□□ -0.78
CTNND1-206ENST00000415361 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms