RNA–Protein interactions for RNA: ENST00000415039.7

PSMD3-202, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-202ENST00000415039 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.45■■■□□ 2.15
PSMD3-202ENST00000415039 ITSN1Q15811 1721 aa28.45■■■□□ 2.15
PSMD3-202ENST00000415039 PTPRUQ92729 1446 aa28.45■■■□□ 2.15
PSMD3-202ENST00000415039 U2AF1L5P0DN76 240 aaPredicted RBP28.45■■■□□ 2.14
PSMD3-202ENST00000415039 U2AF1Q01081 240 aaKnown RBP eCLIP28.45■■■□□ 2.14
PSMD3-202ENST00000415039 PNNQ9H307 717 aaKnown RBP28.44■■■□□ 2.14
PSMD3-202ENST00000415039 CEP170BQ9Y4F5 1589 aaPredicted RBP28.43■■■□□ 2.14
PSMD3-202ENST00000415039 EXOC6Q8TAG9 804 aa28.41■■■□□ 2.14
PSMD3-202ENST00000415039 SLC26A8Q96RN1 970 aa28.41■■■□□ 2.14
PSMD3-202ENST00000415039 TOPAZ1Q8N9V7 1692 aa28.41■■■□□ 2.14
PSMD3-202ENST00000415039 RIMS1Q86UR5 1692 aaKnown RBP28.41■■■□□ 2.14
PSMD3-202ENST00000415039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.41■■■□□ 2.14
PSMD3-202ENST00000415039 PIK3R4Q99570 1358 aa28.4■■■□□ 2.14
PSMD3-202ENST00000415039 DIAPH1O60610 1272 aaKnown RBP28.4■■■□□ 2.14
PSMD3-202ENST00000415039 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
PSMD3-202ENST00000415039 AATKQ6ZMQ8 1374 aa28.4■■■□□ 2.14
PSMD3-202ENST00000415039 PRR36Q9H6K5 1346 aa28.39■■■□□ 2.14
PSMD3-202ENST00000415039 SPINK5Q9NQ38 1064 aaPredicted RBP28.39■■■□□ 2.14
PSMD3-202ENST00000415039 PLEKHG3A1L390 1219 aa28.38■■■□□ 2.13
PSMD3-202ENST00000415039 PLPPR3Q6T4P5 718 aa28.37■■■□□ 2.13
PSMD3-202ENST00000415039 ADAMTSL3P82987 1691 aa28.36■■■□□ 2.13
PSMD3-202ENST00000415039 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
PSMD3-202ENST00000415039 ZNF142P52746 1687 aaPredicted RBP28.35■■■□□ 2.13
PSMD3-202ENST00000415039 U2SURPO15042 1029 aaKnown RBP28.35■■■□□ 2.13
PSMD3-202ENST00000415039 PLEKHF1Q96S99 279 aa28.35■■■□□ 2.13
PSMD3-202ENST00000415039 POLKQ9UBT6 870 aa28.35■■■□□ 2.13
PSMD3-202ENST00000415039 PLIN1O60240 522 aa28.33■■■□□ 2.13
PSMD3-202ENST00000415039 COG3Q96JB2 828 aa28.33■■■□□ 2.13
PSMD3-202ENST00000415039 DMRT2Q9Y5R5 561 aa28.33■■■□□ 2.12
PSMD3-202ENST00000415039 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
PSMD3-202ENST00000415039 NME9Q86XW9 330 aa28.32■■■□□ 2.12
PSMD3-202ENST00000415039 MAPK8IP3Q9UPT6 1336 aa28.32■■■□□ 2.12
PSMD3-202ENST00000415039 CDK12Q9NYV4 1490 aaPredicted RBP28.31■■■□□ 2.12
PSMD3-202ENST00000415039 NRKQ7Z2Y5 1582 aa28.31■■■□□ 2.12
PSMD3-202ENST00000415039 NEUROD2Q15784 382 aa28.31■■■□□ 2.12
PSMD3-202ENST00000415039 RRP7AQ9Y3A4 280 aaKnown RBP28.31■■■□□ 2.12
PSMD3-202ENST00000415039 FCHSD2O94868 740 aa28.3■■■□□ 2.12
PSMD3-202ENST00000415039 CRBNQ96SW2 442 aa28.29■■■□□ 2.12
PSMD3-202ENST00000415039 MYH16Q9H6N6 1097 aa28.29■■■□□ 2.12
PSMD3-202ENST00000415039 NCKAP5LQ9HCH0 1330 aa28.29■■■□□ 2.12
PSMD3-202ENST00000415039 RBM19Q9Y4C8 960 aaKnown RBP28.28■■■□□ 2.12
PSMD3-202ENST00000415039 ACEP12821 1306 aa28.27■■■□□ 2.12
PSMD3-202ENST00000415039 TMPOP42166 694 aaKnown RBP28.27■■■□□ 2.12
PSMD3-202ENST00000415039 SETD1BQ9UPS6 1966 aaKnown RBP28.27■■■□□ 2.12
PSMD3-202ENST00000415039 TTC21BQ7Z4L5 1316 aa28.26■■■□□ 2.11
PSMD3-202ENST00000415039 USP6P35125 1406 aa28.26■■■□□ 2.11
PSMD3-202ENST00000415039 ANKLE2Q86XL3 938 aa28.25■■■□□ 2.11
PSMD3-202ENST00000415039 IL16Q14005 1332 aa28.25■■■□□ 2.11
PSMD3-202ENST00000415039 ANKARQ7Z5J8 1434 aa28.23■■■□□ 2.11
PSMD3-202ENST00000415039 NEFMP07197 916 aa28.22■■■□□ 2.11
PSMD3-202ENST00000415039 CT47B1P0C2W7 299 aaPredicted RBP28.22■■■□□ 2.11
PSMD3-202ENST00000415039 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
PSMD3-202ENST00000415039 SSH2Q76I76 1423 aa28.2■■■□□ 2.11
PSMD3-202ENST00000415039 OVOS2A0A0J9YW53 1432 aa28.2■■■□□ 2.1
PSMD3-202ENST00000415039 OVOS2Q6IE36 1432 aa28.2■■■□□ 2.1
PSMD3-202ENST00000415039 LRRC7Q96NW7 1537 aa28.2■■■□□ 2.1
PSMD3-202ENST00000415039 PPM1GO15355 546 aaPredicted RBP28.2■■■□□ 2.1
PSMD3-202ENST00000415039 C20orf194Q5TEA3 1177 aa28.2■■■□□ 2.1
PSMD3-202ENST00000415039 ZRANB1Q9UGI0 708 aa28.2■■■□□ 2.1
PSMD3-202ENST00000415039 EMILIN1Q9Y6C2 1016 aa28.2■■■□□ 2.1
PSMD3-202ENST00000415039 IL13P35225 146 aa28.19■■■□□ 2.1
PSMD3-202ENST00000415039 PDE3AQ14432 1141 aa28.19■■■□□ 2.1
PSMD3-202ENST00000415039 RSPH6AQ9H0K4 717 aa28.19■■■□□ 2.1
PSMD3-202ENST00000415039 BCAR3O75815 825 aa28.17■■■□□ 2.1
PSMD3-202ENST00000415039 TRIM35Q9UPQ4 493 aa28.17■■■□□ 2.1
PSMD3-202ENST00000415039 CHD2O14647 1828 aaKnown RBP28.17■■■□□ 2.1
PSMD3-202ENST00000415039 NALCNQ8IZF0 1738 aa28.17■■■□□ 2.1
PSMD3-202ENST00000415039 KCNA6P17658 529 aa28.16■■■□□ 2.1
PSMD3-202ENST00000415039 RIPK4P57078 832 aa28.16■■■□□ 2.1
PSMD3-202ENST00000415039 USP31Q70CQ4 1352 aa28.15■■■□□ 2.1
PSMD3-202ENST00000415039 FBLN1P23142 703 aa28.15■■■□□ 2.1
PSMD3-202ENST00000415039 FMN2Q9NZ56 1722 aa28.15■■■□□ 2.1
PSMD3-202ENST00000415039 RARSP54136 660 aaKnown RBP28.14■■■□□ 2.1
PSMD3-202ENST00000415039 PRKAR2BP31323 418 aa28.13■■■□□ 2.09
PSMD3-202ENST00000415039 NUTM2FA1L443 756 aa28.11■■■□□ 2.09
PSMD3-202ENST00000415039 NFE2L2Q16236 605 aa28.1■■■□□ 2.09
PSMD3-202ENST00000415039 NGDNQ8NEJ9 315 aaKnown RBP28.1■■■□□ 2.09
PSMD3-202ENST00000415039 RGPD8O14715 1765 aaPredicted RBP28.09■■■□□ 2.09
PSMD3-202ENST00000415039 RRS1Q15050 365 aaKnown RBP28.09■■■□□ 2.09
PSMD3-202ENST00000415039 FANCIQ9NVI1 1328 aa28.09■■■□□ 2.09
PSMD3-202ENST00000415039 CALD1Q05682 793 aaKnown RBP28.08■■■□□ 2.09
PSMD3-202ENST00000415039 AAMPQ13685 434 aa28.08■■■□□ 2.09
PSMD3-202ENST00000415039 TCERG1O14776 1098 aaKnown RBP28.07■■■□□ 2.08
PSMD3-202ENST00000415039 CANXP27824 592 aaKnown RBP28.07■■■□□ 2.08
PSMD3-202ENST00000415039 CENPQQ7L2Z9 268 aaPredicted RBP28.06■■■□□ 2.08
PSMD3-202ENST00000415039 PMFBP1Q8TBY8 1022 aa28.05■■■□□ 2.08
PSMD3-202ENST00000415039 NPHP4O75161 1426 aaPredicted RBP28.05■■■□□ 2.08
PSMD3-202ENST00000415039 LMOD3Q0VAK6 560 aa28.04■■■□□ 2.08
PSMD3-202ENST00000415039 KDM2BQ8NHM5 1336 aa28.04■■■□□ 2.08
PSMD3-202ENST00000415039 HMOX1P09601 288 aa28.03■■■□□ 2.08
PSMD3-202ENST00000415039 USP54Q70EL1 1684 aa28.02■■■□□ 2.08
PSMD3-202ENST00000415039 MS4A1P11836 297 aa28.02■■■□□ 2.08
PSMD3-202ENST00000415039 PHACTR3Q96KR7 559 aa28■■■□□ 2.07
PSMD3-202ENST00000415039 EXOSC9Q06265 439 aaKnown RBP27.99■■■□□ 2.07
PSMD3-202ENST00000415039 EIF4A2Q14240 407 aaKnown RBP27.99■■■□□ 2.07
PSMD3-202ENST00000415039 TSR2Q969E8 191 aaKnown RBP27.99■■■□□ 2.07
PSMD3-202ENST00000415039 ADGRL3Q9HAR2 1447 aa27.99■■■□□ 2.07
PSMD3-202ENST00000415039 ZNF428Q96B54 188 aa27.99■■■□□ 2.07
PSMD3-202ENST00000415039 PIK3C2AO00443 1686 aa27.98■■■□□ 2.07
PSMD3-202ENST00000415039 PEAK1Q9H792 1746 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms