RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ARGLU1Q9NWB6 273 aaPredicted RBP22.06■■□□□ 1.12
SHANK3-202ENST00000414786 MAPK8IP2Q13387 824 aaPredicted RBP22.06■■□□□ 1.12
SHANK3-202ENST00000414786 TRIM5Q9C035 493 aa22.06■■□□□ 1.12
SHANK3-202ENST00000414786 E9PSI1 815 aa22.06■■□□□ 1.12
SHANK3-202ENST00000414786 TXLNAP40222 546 aa22.06■■□□□ 1.12
SHANK3-202ENST00000414786 NOM1Q5C9Z4 860 aaKnown RBP22.05■■□□□ 1.12
SHANK3-202ENST00000414786 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
SHANK3-202ENST00000414786 TOM1L2Q6ZVM7 507 aa22.05■■□□□ 1.12
SHANK3-202ENST00000414786 RSPH4AQ5TD94 716 aa22.05■■□□□ 1.12
SHANK3-202ENST00000414786 CT47B1P0C2W7 299 aaPredicted RBP22.05■■□□□ 1.12
SHANK3-202ENST00000414786 INTS3Q68E01 1043 aaKnown RBP22.04■■□□□ 1.12
SHANK3-202ENST00000414786 FKBP4Q02790 459 aaKnown RBP eCLIP22.04■■□□□ 1.121e-6■■□□□ 13.7
SHANK3-202ENST00000414786 SKOR2Q2VWA4 1001 aaPredicted RBP22.04■■□□□ 1.12
SHANK3-202ENST00000414786 SURF6O75683 361 aaKnown RBP22.04■■□□□ 1.12
SHANK3-202ENST00000414786 FAM69CQ0P6D2 419 aa22.03■■□□□ 1.12
SHANK3-202ENST00000414786 DZIP1LQ8IYY4 767 aaKnown RBP22.03■■□□□ 1.12
SHANK3-202ENST00000414786 CENPQQ7L2Z9 268 aaPredicted RBP22.02■■□□□ 1.12
SHANK3-202ENST00000414786 FILIP1LQ4L180 1135 aa22.02■■□□□ 1.12
SHANK3-202ENST00000414786 DHX8Q14562 1220 aaKnown RBP22.02■■□□□ 1.12
SHANK3-202ENST00000414786 NAT10Q9H0A0 1025 aaKnown RBP22.02■■□□□ 1.12
SHANK3-202ENST00000414786 SLC4A8Q2Y0W8 1093 aa22.01■■□□□ 1.11
SHANK3-202ENST00000414786 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
SHANK3-202ENST00000414786 PANK1Q8TE04 598 aa22.01■■□□□ 1.11
SHANK3-202ENST00000414786 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
SHANK3-202ENST00000414786 NFKBIBQ15653 356 aa22■■□□□ 1.11
SHANK3-202ENST00000414786 CCDC69A6NI79 296 aa22■■□□□ 1.11
SHANK3-202ENST00000414786 SERPINC1P01008 464 aa22■■□□□ 1.11
SHANK3-202ENST00000414786 SMARCE1Q969G3 411 aa22■■□□□ 1.11
SHANK3-202ENST00000414786 SOGA3Q5TF21 947 aa22■■□□□ 1.11
SHANK3-202ENST00000414786 COMMD10Q9Y6G5 202 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
SHANK3-202ENST00000414786 CABP4P57796 275 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 CHMP5Q9NZZ3 219 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
SHANK3-202ENST00000414786 TNNT1P13805 278 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 GSE1Q14687 1217 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 SERPINA10Q9UK55 444 aa21.99■■□□□ 1.11
SHANK3-202ENST00000414786 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
SHANK3-202ENST00000414786 ERLIN2O94905 339 aa21.98■■□□□ 1.11
SHANK3-202ENST00000414786 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
SHANK3-202ENST00000414786 DDX19BQ9UMR2 479 aa21.98■■□□□ 1.11
SHANK3-202ENST00000414786 FIBPO43427 364 aa21.98■■□□□ 1.11
SHANK3-202ENST00000414786 ANKRD18AQ8IVF6 992 aa21.98■■□□□ 1.11
SHANK3-202ENST00000414786 MPHOSPH8Q99549 860 aa21.98■■□□□ 1.11
SHANK3-202ENST00000414786 CCDC158Q5M9N0 1113 aa21.97■■□□□ 1.11
SHANK3-202ENST00000414786 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
SHANK3-202ENST00000414786 LRRFIP2Q9Y608 721 aaKnown RBP21.97■■□□□ 1.11
SHANK3-202ENST00000414786 GBP2P32456 591 aaPredicted RBP21.97■■□□□ 1.11
SHANK3-202ENST00000414786 ANAPC15P60006 121 aa21.97■■□□□ 1.11
SHANK3-202ENST00000414786 DNA2P51530 1060 aa21.97■■□□□ 1.11
SHANK3-202ENST00000414786 STK38Q15208 465 aa21.97■■□□□ 1.11
SHANK3-202ENST00000414786 GNL3LQ9NVN8 582 aaKnown RBP21.97■■□□□ 1.11
SHANK3-202ENST00000414786 KINO60870 393 aaKnown RBP21.96■■□□□ 1.11
SHANK3-202ENST00000414786 PDE3BQ13370 1112 aa21.96■■□□□ 1.11
SHANK3-202ENST00000414786 ERC1Q8IUD2 1116 aa21.96■■□□□ 1.11
SHANK3-202ENST00000414786 CCDC112Q8NEF3 446 aa21.96■■□□□ 1.11
SHANK3-202ENST00000414786 RBM10P98175 930 aaKnown RBP21.96■■□□□ 1.11
SHANK3-202ENST00000414786 UBA5Q9GZZ9 404 aa21.96■■□□□ 1.11
SHANK3-202ENST00000414786 CCDC113Q9H0I3 377 aa21.96■■□□□ 1.11
SHANK3-202ENST00000414786 RAI14Q9P0K7 980 aa21.95■■□□□ 1.11
SHANK3-202ENST00000414786 NINLQ9Y2I6 1382 aa21.95■■□□□ 1.1
SHANK3-202ENST00000414786 API5Q9BZZ5 524 aaKnown RBP21.95■■□□□ 1.1
SHANK3-202ENST00000414786 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
SHANK3-202ENST00000414786 GOLGA6L10A6NI86 522 aa21.95■■□□□ 1.1
SHANK3-202ENST00000414786 CAVIN1Q6NZI2 390 aaKnown RBP21.94■■□□□ 1.1
SHANK3-202ENST00000414786 DRC1Q96MC2 740 aa21.94■■□□□ 1.1
SHANK3-202ENST00000414786 ZNHIT6Q9NWK9 470 aaKnown RBP21.94■■□□□ 1.1
SHANK3-202ENST00000414786 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
SHANK3-202ENST00000414786 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
SHANK3-202ENST00000414786 PSMA5P28066 241 aa21.92■■□□□ 1.1
SHANK3-202ENST00000414786 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
SHANK3-202ENST00000414786 GOLGA6L10A0A0M3HER8 536 aa21.92■■□□□ 1.1
SHANK3-202ENST00000414786 TDO2P48775 406 aa21.91■■□□□ 1.1
SHANK3-202ENST00000414786 EZRP15311 586 aaKnown RBP21.91■■□□□ 1.1
SHANK3-202ENST00000414786 KIF15Q9NS87 1388 aa21.91■■□□□ 1.1
SHANK3-202ENST00000414786 MACROD2A1Z1Q3 448 aa21.91■■□□□ 1.1
SHANK3-202ENST00000414786 NF2P35240 595 aa21.91■■□□□ 1.1
SHANK3-202ENST00000414786 ABCF2Q9UG63 623 aa21.91■■□□□ 1.1
SHANK3-202ENST00000414786 VTI1AQ96AJ9 217 aa21.9■■□□□ 1.1
SHANK3-202ENST00000414786 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.9■■□□□ 1.1
SHANK3-202ENST00000414786 TMX1Q9H3N1 280 aa21.9■■□□□ 1.1
SHANK3-202ENST00000414786 PRPF40AO75400 957 aaKnown RBP21.89■■□□□ 1.1
SHANK3-202ENST00000414786 CTNNBL1Q8WYA6 563 aaPredicted RBP21.89■■□□□ 1.09
SHANK3-202ENST00000414786 ME1P48163 572 aa21.89■■□□□ 1.09
SHANK3-202ENST00000414786 PPFIBP1Q86W92 1011 aa21.89■■□□□ 1.09
SHANK3-202ENST00000414786 ERCC4Q92889 916 aaPredicted RBP21.88■■□□□ 1.09
SHANK3-202ENST00000414786 C22orf23Q9BZE7 217 aa21.88■■□□□ 1.09
SHANK3-202ENST00000414786 CCDC144AA2RUR9 1427 aa21.88■■□□□ 1.09
SHANK3-202ENST00000414786 NEK4P51957 841 aa21.87■■□□□ 1.09
SHANK3-202ENST00000414786 ADAMTS2O95450 1211 aa21.87■■□□□ 1.09
SHANK3-202ENST00000414786 DESP17661 470 aa21.87■■□□□ 1.09
SHANK3-202ENST00000414786 CRACR2BQ8N4Y2 399 aaPredicted RBP21.87■■□□□ 1.09
SHANK3-202ENST00000414786 LRP2BPQ9P2M1 347 aa21.87■■□□□ 1.09
SHANK3-202ENST00000414786 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
SHANK3-202ENST00000414786 FAM43AQ8N2R8 423 aa21.87■■□□□ 1.09
SHANK3-202ENST00000414786 UBE4AQ14139 1066 aa21.86■■□□□ 1.09
SHANK3-202ENST00000414786 GOPCQ9HD26 462 aa21.86■■□□□ 1.09
SHANK3-202ENST00000414786 TATP17735 454 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms