RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
SMARCA4-202ENST00000413806 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
SMARCA4-202ENST00000413806 BACH2Q9BYV9 841 aa16.51■□□□□ 0.23
SMARCA4-202ENST00000413806 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 TRAK2O60296 914 aa16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 IPO7O95373 1038 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 NESP48681 1621 aa16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 ANKRD30BQ9BXX2 1392 aa16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 NLRP6P59044 892 aa16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 SAFBQ15424 915 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMARCA4-202ENST00000413806 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 PRAM1Q96QH2 718 aa16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 AK7Q96M32 723 aa16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 HSP90B2PQ58FF3 399 aa16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
SMARCA4-202ENST00000413806 CUL7Q14999 1698 aa16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 GNAI2P04899 355 aa16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 H0YHG0 523 aa16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 BCAR3O75815 825 aa16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
SMARCA4-202ENST00000413806 CCDC173Q0VFZ6 552 aa16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 SLC52A1Q9NWF4 448 aa16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 CCT4P50991 539 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 KIAA0586Q9BVV6 1533 aa16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 CCDC141Q6ZP82 1450 aa16.47■□□□□ 0.23
SMARCA4-202ENST00000413806 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 SLC12A5Q9H2X9 1139 aa16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 TAF3Q5VWG9 929 aa16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 CWC22Q9HCG8 908 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 ATAD2Q6PL18 1390 aa16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
SMARCA4-202ENST00000413806 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.22
SMARCA4-202ENST00000413806 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.22
SMARCA4-202ENST00000413806 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 ATF3P18847 181 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 PDCP20941 246 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 RUFY1Q96T51 708 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 IQGAP2Q13576 1575 aa16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-202ENST00000413806 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-202ENST00000413806 PCMTD1Q96MG8 357 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-202ENST00000413806 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
SMARCA4-202ENST00000413806 WASHC4Q2M389 1173 aa16.44■□□□□ 0.22
SMARCA4-202ENST00000413806 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
SMARCA4-202ENST00000413806 NEK4P51957 841 aa16.44■□□□□ 0.22
SMARCA4-202ENST00000413806 LEKR1Q6ZMV7 388 aa16.43■□□□□ 0.22
SMARCA4-202ENST00000413806 UQCRHLA0A096LP55 91 aa16.43■□□□□ 0.22
SMARCA4-202ENST00000413806 UQCRHP07919 91 aa16.43■□□□□ 0.22
SMARCA4-202ENST00000413806 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
SMARCA4-202ENST00000413806 OLFM4Q6UX06 510 aa16.42■□□□□ 0.22
SMARCA4-202ENST00000413806 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
SMARCA4-202ENST00000413806 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
SMARCA4-202ENST00000413806 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
SMARCA4-202ENST00000413806 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 C1orf115Q9H7X2 142 aa16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 XBP1P17861 261 aa16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 CABP1Q9NZU7 370 aa16.41■□□□□ 0.22
SMARCA4-202ENST00000413806 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 CDR1P51861 262 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
SMARCA4-202ENST00000413806 FCHSD2O94868 740 aa16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 CCDC184Q52MB2 194 aa16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 AEBP1Q8IUX7 1158 aa16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 FOSBP53539 338 aa16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
SMARCA4-202ENST00000413806 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-202ENST00000413806 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
SMARCA4-202ENST00000413806 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-202ENST00000413806 NSD3Q9BZ95 1437 aa16.38■□□□□ 0.21
SMARCA4-202ENST00000413806 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms