RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 EID1Q9Y6B2 187 aa32.09■■■□□ 2.73
VRK2-202ENST00000412104 ITSN1Q15811 1721 aa32.09■■■□□ 2.73
VRK2-202ENST00000412104 PLPPR3Q6T4P5 718 aa32.08■■■□□ 2.73
VRK2-202ENST00000412104 PNPLA6Q8IY17 1366 aa32.08■■■□□ 2.73
VRK2-202ENST00000412104 CCDC27Q2M243 656 aa32.08■■■□□ 2.73
VRK2-202ENST00000412104 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.07■■■□□ 2.72
VRK2-202ENST00000412104 NCBP3Q53F19 620 aaKnown RBP32.06■■■□□ 2.72
VRK2-202ENST00000412104 CCDC61Q9Y6R9 512 aa32.06■■■□□ 2.72
VRK2-202ENST00000412104 U2SURPO15042 1029 aaKnown RBP32.05■■■□□ 2.72
VRK2-202ENST00000412104 PTPRUQ92729 1446 aa32.05■■■□□ 2.72
VRK2-202ENST00000412104 WDR63Q8IWG1 891 aa32.04■■■□□ 2.72
VRK2-202ENST00000412104 NCKAP5LQ9HCH0 1330 aa32.04■■■□□ 2.72
VRK2-202ENST00000412104 PRR36Q9H6K5 1346 aa32.03■■■□□ 2.72
VRK2-202ENST00000412104 SLC26A8Q96RN1 970 aa32.02■■■□□ 2.72
VRK2-202ENST00000412104 TOPAZ1Q8N9V7 1692 aa32.02■■■□□ 2.72
VRK2-202ENST00000412104 MAP2P11137 1827 aaKnown RBP32.01■■■□□ 2.72
VRK2-202ENST00000412104 DIAPH1O60610 1272 aaKnown RBP32.01■■■□□ 2.71
VRK2-202ENST00000412104 PLEKHF1Q96S99 279 aa32.01■■■□□ 2.71
VRK2-202ENST00000412104 DIP2AQ14689 1571 aa31.99■■■□□ 2.71
VRK2-202ENST00000412104 NME9Q86XW9 330 aa31.98■■■□□ 2.71
VRK2-202ENST00000412104 THEMISQ8N1K5 641 aaPredicted RBP31.98■■■□□ 2.71
VRK2-202ENST00000412104 POLKQ9UBT6 870 aa31.98■■■□□ 2.71
VRK2-202ENST00000412104 BCAR3O75815 825 aa31.97■■■□□ 2.71
VRK2-202ENST00000412104 TBX22Q9Y458 520 aa31.95■■■□□ 2.71
VRK2-202ENST00000412104 NRKQ7Z2Y5 1582 aa31.95■■■□□ 2.7
VRK2-202ENST00000412104 FBLN1P23142 703 aa31.94■■■□□ 2.7
VRK2-202ENST00000412104 MAPK8IP3Q9UPT6 1336 aa31.94■■■□□ 2.7
VRK2-202ENST00000412104 PTCH1Q13635 1447 aa31.94■■■□□ 2.7
VRK2-202ENST00000412104 ZNF692Q9BU19 519 aaPredicted RBP31.92■■■□□ 2.7
VRK2-202ENST00000412104 CEP170BQ9Y4F5 1589 aaPredicted RBP31.92■■■□□ 2.7
VRK2-202ENST00000412104 RIMS1Q86UR5 1692 aaKnown RBP31.92■■■□□ 2.7
VRK2-202ENST00000412104 LRRC7Q96NW7 1537 aa31.92■■■□□ 2.7
VRK2-202ENST00000412104 AATKQ6ZMQ8 1374 aa31.92■■■□□ 2.7
VRK2-202ENST00000412104 AMOTL2Q9Y2J4 779 aa31.92■■■□□ 2.7
VRK2-202ENST00000412104 TMPOP42166 694 aaKnown RBP31.91■■■□□ 2.7
VRK2-202ENST00000412104 ZRANB1Q9UGI0 708 aa31.91■■■□□ 2.7
VRK2-202ENST00000412104 CDK12Q9NYV4 1490 aaPredicted RBP31.91■■■□□ 2.7
VRK2-202ENST00000412104 PPM1GO15355 546 aaPredicted RBP31.9■■■□□ 2.7
VRK2-202ENST00000412104 COG3Q96JB2 828 aa31.89■■■□□ 2.7
VRK2-202ENST00000412104 PNNQ9H307 717 aaKnown RBP31.88■■■□□ 2.69
VRK2-202ENST00000412104 MYH16Q9H6N6 1097 aa31.88■■■□□ 2.69
VRK2-202ENST00000412104 XRN1Q8IZH2 1706 aaKnown RBP31.88■■■□□ 2.69
VRK2-202ENST00000412104 EMILIN1Q9Y6C2 1016 aa31.88■■■□□ 2.69
VRK2-202ENST00000412104 FANCIQ9NVI1 1328 aa31.87■■■□□ 2.69
VRK2-202ENST00000412104 TRIM35Q9UPQ4 493 aa31.85■■■□□ 2.69
VRK2-202ENST00000412104 PLEKHG3A1L390 1219 aa31.85■■■□□ 2.69
VRK2-202ENST00000412104 FCHSD2O94868 740 aa31.85■■■□□ 2.69
VRK2-202ENST00000412104 ACEP12821 1306 aa31.84■■■□□ 2.69
VRK2-202ENST00000412104 RARSP54136 660 aaKnown RBP31.83■■■□□ 2.69
VRK2-202ENST00000412104 NUTM2FA1L443 756 aa31.83■■■□□ 2.69
VRK2-202ENST00000412104 RSPH6AQ9H0K4 717 aa31.82■■■□□ 2.68
VRK2-202ENST00000412104 USP6P35125 1406 aa31.81■■■□□ 2.68
VRK2-202ENST00000412104 KDM2BQ8NHM5 1336 aa31.81■■■□□ 2.68
VRK2-202ENST00000412104 PDE3AQ14432 1141 aa31.81■■■□□ 2.68
VRK2-202ENST00000412104 TTC21BQ7Z4L5 1316 aa31.8■■■□□ 2.68
VRK2-202ENST00000412104 RIPK4P57078 832 aa31.79■■■□□ 2.68
VRK2-202ENST00000412104 TCERG1O14776 1098 aaKnown RBP31.79■■■□□ 2.68
VRK2-202ENST00000412104 CANXP27824 592 aaKnown RBP31.79■■■□□ 2.68
VRK2-202ENST00000412104 IL13P35225 146 aa31.79■■■□□ 2.68
VRK2-202ENST00000412104 ZNF142P52746 1687 aaPredicted RBP31.78■■■□□ 2.68
VRK2-202ENST00000412104 PRKAR2BP31323 418 aa31.78■■■□□ 2.68
VRK2-202ENST00000412104 RRS1Q15050 365 aaKnown RBP31.77■■■□□ 2.68
VRK2-202ENST00000412104 IL16Q14005 1332 aa31.77■■■□□ 2.68
VRK2-202ENST00000412104 OVOS2A0A0J9YW53 1432 aa31.77■■■□□ 2.68
VRK2-202ENST00000412104 OVOS2Q6IE36 1432 aa31.77■■■□□ 2.68
VRK2-202ENST00000412104 NALCNQ8IZF0 1738 aa31.77■■■□□ 2.68
VRK2-202ENST00000412104 ADAMTSL3P82987 1691 aa31.76■■■□□ 2.67
VRK2-202ENST00000412104 TSR2Q969E8 191 aaKnown RBP31.75■■■□□ 2.67
VRK2-202ENST00000412104 RGPD8O14715 1765 aaPredicted RBP31.75■■■□□ 2.67
VRK2-202ENST00000412104 CENPQQ7L2Z9 268 aaPredicted RBP31.75■■■□□ 2.67
VRK2-202ENST00000412104 PIK3R4Q99570 1358 aa31.74■■■□□ 2.67
VRK2-202ENST00000412104 SSH2Q76I76 1423 aa31.73■■■□□ 2.67
VRK2-202ENST00000412104 NEFMP07197 916 aa31.73■■■□□ 2.67
VRK2-202ENST00000412104 HMOX1P09601 288 aa31.73■■■□□ 2.67
VRK2-202ENST00000412104 FRAT1Q92837 279 aaPredicted RBP31.73■■■□□ 2.67
VRK2-202ENST00000412104 CT47B1P0C2W7 299 aaPredicted RBP31.72■■■□□ 2.67
VRK2-202ENST00000412104 PANK1Q8TE04 598 aa31.71■■■□□ 2.67
VRK2-202ENST00000412104 BCL2L13Q9BXK5 485 aa31.7■■■□□ 2.67
VRK2-202ENST00000412104 KCNA6P17658 529 aa31.69■■■□□ 2.66
VRK2-202ENST00000412104 MS4A1P11836 297 aa31.68■■■□□ 2.66
VRK2-202ENST00000412104 PHACTR3Q96KR7 559 aa31.68■■■□□ 2.66
VRK2-202ENST00000412104 EXOSC9Q06265 439 aaKnown RBP31.67■■■□□ 2.66
VRK2-202ENST00000412104 COG6Q9Y2V7 657 aa31.67■■■□□ 2.66
VRK2-202ENST00000412104 NFE2L2Q16236 605 aa31.67■■■□□ 2.66
VRK2-202ENST00000412104 PMFBP1Q8TBY8 1022 aa31.66■■■□□ 2.66
VRK2-202ENST00000412104 FMN2Q9NZ56 1722 aa31.66■■■□□ 2.66
VRK2-202ENST00000412104 USP31Q70CQ4 1352 aa31.65■■■□□ 2.66
VRK2-202ENST00000412104 ANKARQ7Z5J8 1434 aa31.65■■■□□ 2.66
VRK2-202ENST00000412104 TTC21AQ8NDW8 1320 aa31.65■■■□□ 2.66
VRK2-202ENST00000412104 PEAK1Q9H792 1746 aa31.64■■■□□ 2.66
VRK2-202ENST00000412104 SKAP1Q86WV1 359 aa31.64■■■□□ 2.66
VRK2-202ENST00000412104 CHD2O14647 1828 aaKnown RBP31.64■■■□□ 2.66
VRK2-202ENST00000412104 MSH5O43196 834 aa31.63■■■□□ 2.65
VRK2-202ENST00000412104 ANKLE2Q86XL3 938 aa31.63■■■□□ 2.65
VRK2-202ENST00000412104 DLG5Q8TDM6 1919 aa31.62■■■□□ 2.65
VRK2-202ENST00000412104 CLUAP1Q96AJ1 413 aa31.61■■■□□ 2.65
VRK2-202ENST00000412104 RLBP1P12271 317 aa31.61■■■□□ 2.65
VRK2-202ENST00000412104 NGDNQ8NEJ9 315 aaKnown RBP31.61■■■□□ 2.65
VRK2-202ENST00000412104 TNNQ9UQP3 1299 aa31.61■■■□□ 2.65
VRK2-202ENST00000412104 PIK3C2AO00443 1686 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms