RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 KTN1Q86UP2 1357 aaKnown RBP21.49■■□□□ 1.03
TRAPPC12-203ENST00000411973 PAK3O75914 559 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC12-203ENST00000411973 MYOM1P52179 1685 aa21.49■■□□□ 1.03
TRAPPC12-203ENST00000411973 C11orf95C9JLR9 678 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC12-203ENST00000411973 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC12-203ENST00000411973 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC12-203ENST00000411973 NRKQ7Z2Y5 1582 aa21.48■■□□□ 1.03
TRAPPC12-203ENST00000411973 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
TRAPPC12-203ENST00000411973 LRP6O75581 1613 aa21.47■■□□□ 1.03
TRAPPC12-203ENST00000411973 LMOD2Q6P5Q4 547 aa21.46■■□□□ 1.03
TRAPPC12-203ENST00000411973 ANKRD36BQ8N2N9 1353 aa21.46■■□□□ 1.03
TRAPPC12-203ENST00000411973 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
TRAPPC12-203ENST00000411973 TTC21AQ8NDW8 1320 aa21.44■■□□□ 1.02
TRAPPC12-203ENST00000411973 EDC4Q6P2E9 1401 aaKnown RBP21.44■■□□□ 1.02
TRAPPC12-203ENST00000411973 ABCA3Q99758 1704 aa21.43■■□□□ 1.02
TRAPPC12-203ENST00000411973 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
TRAPPC12-203ENST00000411973 NUTM2BA6NNL0 878 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC12-203ENST00000411973 NUTM2EB1AL46 878 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC12-203ENST00000411973 NUTM2AQ8IVF1 878 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC12-203ENST00000411973 ABTB2Q8N961 1025 aa21.43■■□□□ 1.02
TRAPPC12-203ENST00000411973 PIK3C2AO00443 1686 aa21.42■■□□□ 1.02
TRAPPC12-203ENST00000411973 KIF7Q2M1P5 1343 aa21.41■■□□□ 1.02
TRAPPC12-203ENST00000411973 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
TRAPPC12-203ENST00000411973 CABLES1Q8TDN4 633 aa21.4■■□□□ 1.02
TRAPPC12-203ENST00000411973 POLR3GLQ9BT43 218 aa21.4■■□□□ 1.02
TRAPPC12-203ENST00000411973 NLRP13Q86W25 1043 aa21.39■■□□□ 1.01
TRAPPC12-203ENST00000411973 USP19O94966 1318 aa21.38■■□□□ 1.01
TRAPPC12-203ENST00000411973 USP54Q70EL1 1684 aa21.37■■□□□ 1.01
TRAPPC12-203ENST00000411973 PHRF1Q9P1Y6 1649 aaKnown RBP21.37■■□□□ 1.01
TRAPPC12-203ENST00000411973 NLRP6P59044 892 aa21.37■■□□□ 1.01
TRAPPC12-203ENST00000411973 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
TRAPPC12-203ENST00000411973 NUTM2GQ5VZR2 741 aa21.37■■□□□ 1.01
TRAPPC12-203ENST00000411973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
TRAPPC12-203ENST00000411973 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
TRAPPC12-203ENST00000411973 CCDC7Q96M83 1385 aa21.36■■□□□ 1.01
TRAPPC12-203ENST00000411973 ADAMTS2O95450 1211 aa21.36■■□□□ 1.01
TRAPPC12-203ENST00000411973 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
TRAPPC12-203ENST00000411973 CARD14Q9BXL6 1004 aa21.35■■□□□ 1.01
TRAPPC12-203ENST00000411973 HAP1P54257 671 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC12-203ENST00000411973 SLIT3O75094 1523 aa21.34■■□□□ 1.01
TRAPPC12-203ENST00000411973 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
TRAPPC12-203ENST00000411973 NME9Q86XW9 330 aa21.33■■□□□ 1.01
TRAPPC12-203ENST00000411973 NSD3Q9BZ95 1437 aa21.31■■□□□ 1
TRAPPC12-203ENST00000411973 GCP02774 474 aa21.31■■□□□ 1
TRAPPC12-203ENST00000411973 C8orf37Q96NL8 207 aa21.31■■□□□ 1
TRAPPC12-203ENST00000411973 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
TRAPPC12-203ENST00000411973 PANK3Q9H999 370 aa21.31■■□□□ 1
TRAPPC12-203ENST00000411973 OVOS2A0A0J9YW53 1432 aa21.3■■□□□ 1
TRAPPC12-203ENST00000411973 OVOS2Q6IE36 1432 aa21.3■■□□□ 1
TRAPPC12-203ENST00000411973 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
TRAPPC12-203ENST00000411973 NGLY1Q96IV0 654 aa21.3■■□□□ 1
TRAPPC12-203ENST00000411973 FYB1O15117 783 aa21.29■■□□□ 1
TRAPPC12-203ENST00000411973 RGS17Q9UGC6 210 aaPredicted RBP21.29■■□□□ 1
TRAPPC12-203ENST00000411973 ZRANB1Q9UGI0 708 aa21.29■■□□□ 1
TRAPPC12-203ENST00000411973 KIF20BQ96Q89 1820 aa21.29■■□□□ 1
TRAPPC12-203ENST00000411973 CPDO75976 1380 aa21.28■■□□□ 1
TRAPPC12-203ENST00000411973 KCNH5Q8NCM2 988 aa21.28■■□□□ 1
TRAPPC12-203ENST00000411973 AFF2P51816 1311 aa21.28■■□□□ 1
TRAPPC12-203ENST00000411973 FAM83GA6ND36 823 aa21.27■■□□□ 1
TRAPPC12-203ENST00000411973 SLIT2O94813 1529 aa21.27■■□□□ 1
TRAPPC12-203ENST00000411973 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
TRAPPC12-203ENST00000411973 KIAA0232Q92628 1395 aa21.26■□□□□ 0.99
TRAPPC12-203ENST00000411973 ZC3H6P61129 1189 aaKnown RBP21.26■□□□□ 0.99
TRAPPC12-203ENST00000411973 ZNF772Q68DY9 489 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC12-203ENST00000411973 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
TRAPPC12-203ENST00000411973 NFAT5O94916 1531 aa21.25■□□□□ 0.99
TRAPPC12-203ENST00000411973 PLCH1Q4KWH8 1693 aa21.25■□□□□ 0.99
TRAPPC12-203ENST00000411973 COG3Q96JB2 828 aa21.25■□□□□ 0.99
TRAPPC12-203ENST00000411973 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
TRAPPC12-203ENST00000411973 PRDM11Q9NQV5 511 aa21.24■□□□□ 0.99
TRAPPC12-203ENST00000411973 BCL9LQ86UU0 1499 aa21.24■□□□□ 0.99
TRAPPC12-203ENST00000411973 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
TRAPPC12-203ENST00000411973 GGNBP2Q9H3C7 697 aa21.23■□□□□ 0.99
TRAPPC12-203ENST00000411973 ARHGEF25Q86VW2 580 aa21.22■□□□□ 0.99
TRAPPC12-203ENST00000411973 USP21Q9UK80 565 aa21.22■□□□□ 0.99
TRAPPC12-203ENST00000411973 PER1O15534 1290 aaPredicted RBP21.21■□□□□ 0.99
TRAPPC12-203ENST00000411973 LMO7Q8WWI1 1683 aa21.21■□□□□ 0.99
TRAPPC12-203ENST00000411973 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
TRAPPC12-203ENST00000411973 UNC5CLQ8IV45 518 aa21.2■□□□□ 0.98
TRAPPC12-203ENST00000411973 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
TRAPPC12-203ENST00000411973 NSD2O96028 1365 aa21.2■□□□□ 0.98
TRAPPC12-203ENST00000411973 COL18A1P39060 1754 aa21.2■□□□□ 0.98
TRAPPC12-203ENST00000411973 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
TRAPPC12-203ENST00000411973 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
TRAPPC12-203ENST00000411973 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
TRAPPC12-203ENST00000411973 AATKQ6ZMQ8 1374 aa21.19■□□□□ 0.98
TRAPPC12-203ENST00000411973 LTN1O94822 1766 aa21.18■□□□□ 0.98
TRAPPC12-203ENST00000411973 SOX12O15370 315 aa21.18■□□□□ 0.98
TRAPPC12-203ENST00000411973 POTEAQ6S8J7 498 aa21.18■□□□□ 0.98
TRAPPC12-203ENST00000411973 ABCC6O95255 1503 aa21.18■□□□□ 0.98
TRAPPC12-203ENST00000411973 TRPC5Q9UL62 973 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC12-203ENST00000411973 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
TRAPPC12-203ENST00000411973 ATRNO75882 1429 aa21.16■□□□□ 0.98
TRAPPC12-203ENST00000411973 AMER1Q5JTC6 1135 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC12-203ENST00000411973 QTRT2Q9H974 415 aaKnown RBP21.16■□□□□ 0.98
TRAPPC12-203ENST00000411973 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
TRAPPC12-203ENST00000411973 VPS72Q15906 364 aa21.13■□□□□ 0.97
TRAPPC12-203ENST00000411973 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
TRAPPC12-203ENST00000411973 ZBTB7CA1YPR0 619 aa21.12■□□□□ 0.97
TRAPPC12-203ENST00000411973 AXIN2Q9Y2T1 843 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms