RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 RRP7BPQ9NSQ0 103 aa11.34□□□□□ -0.59
UBE2F-204ENST00000409953 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
UBE2F-204ENST00000409953 ABCC5O15440 1437 aa11.33□□□□□ -0.6
UBE2F-204ENST00000409953 SPATA31A5Q5VU36 1347 aa11.33□□□□□ -0.6
UBE2F-204ENST00000409953 SPATA31A7Q8IWB4 1347 aa11.33□□□□□ -0.6
UBE2F-204ENST00000409953 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
UBE2F-204ENST00000409953 BTG4Q9NY30 223 aa11.32□□□□□ -0.6
UBE2F-204ENST00000409953 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
UBE2F-204ENST00000409953 GOLGB1Q14789 3259 aaKnown RBP11.32□□□□□ -0.6
UBE2F-204ENST00000409953 WWC3Q9ULE0 1092 aa11.31□□□□□ -0.6
UBE2F-204ENST00000409953 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
UBE2F-204ENST00000409953 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
UBE2F-204ENST00000409953 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
UBE2F-204ENST00000409953 ARXQ96QS3 562 aa11.29□□□□□ -0.6
UBE2F-204ENST00000409953 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
UBE2F-204ENST00000409953 TNS3Q68CZ2 1445 aa11.28□□□□□ -0.6
UBE2F-204ENST00000409953 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
UBE2F-204ENST00000409953 MTFR1LQ9H019 292 aa11.28□□□□□ -0.6
UBE2F-204ENST00000409953 CDC42BPGQ6DT37 1551 aa11.28□□□□□ -0.6
UBE2F-204ENST00000409953 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
UBE2F-204ENST00000409953 AATKQ6ZMQ8 1374 aa11.27□□□□□ -0.61
UBE2F-204ENST00000409953 RGPD3A6NKT7 1758 aaPredicted RBP11.26□□□□□ -0.61
UBE2F-204ENST00000409953 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
UBE2F-204ENST00000409953 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
UBE2F-204ENST00000409953 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
UBE2F-204ENST00000409953 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
UBE2F-204ENST00000409953 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
UBE2F-204ENST00000409953 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
UBE2F-204ENST00000409953 MYOM3Q5VTT5 1437 aa11.25□□□□□ -0.61
UBE2F-204ENST00000409953 IQGAP3Q86VI3 1631 aa11.24□□□□□ -0.61
UBE2F-204ENST00000409953 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
UBE2F-204ENST00000409953 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
UBE2F-204ENST00000409953 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
UBE2F-204ENST00000409953 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
UBE2F-204ENST00000409953 SPATA31A1Q5TZJ5 1347 aa11.23□□□□□ -0.61
UBE2F-204ENST00000409953 ADCY9O60503 1353 aa11.23□□□□□ -0.61
UBE2F-204ENST00000409953 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
UBE2F-204ENST00000409953 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
UBE2F-204ENST00000409953 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
UBE2F-204ENST00000409953 TNS2Q63HR2 1409 aa11.22□□□□□ -0.61
UBE2F-204ENST00000409953 STK32BQ9NY57 414 aa11.22□□□□□ -0.61
UBE2F-204ENST00000409953 WDR90Q96KV7 1748 aa11.21□□□□□ -0.61
UBE2F-204ENST00000409953 ARHGEF10O15013 1369 aa11.21□□□□□ -0.61
UBE2F-204ENST00000409953 KIF3CO14782 793 aa11.21□□□□□ -0.61
UBE2F-204ENST00000409953 PLSCR1O15162 318 aa11.21□□□□□ -0.61
UBE2F-204ENST00000409953 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■□□□ 11.6
UBE2F-204ENST00000409953 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
UBE2F-204ENST00000409953 PRAG1Q86YV5 1406 aa11.2□□□□□ -0.62
UBE2F-204ENST00000409953 POLA2Q14181 598 aa11.2□□□□□ -0.62
UBE2F-204ENST00000409953 TECPR2O15040 1411 aa11.19□□□□□ -0.62
UBE2F-204ENST00000409953 SLC15A2Q16348 729 aa11.19□□□□□ -0.62
UBE2F-204ENST00000409953 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
UBE2F-204ENST00000409953 DSG3P32926 999 aa11.18□□□□□ -0.62
UBE2F-204ENST00000409953 HTRA3P83110 453 aa11.18□□□□□ -0.62
UBE2F-204ENST00000409953 PSME1Q06323 249 aa11.18□□□□□ -0.62
UBE2F-204ENST00000409953 NLGN2Q8NFZ4 835 aa11.18□□□□□ -0.62
UBE2F-204ENST00000409953 PCNTO95613 3336 aa11.18□□□□□ -0.62
UBE2F-204ENST00000409953 NAIPQ13075 1403 aa11.18□□□□□ -0.62
UBE2F-204ENST00000409953 SBNO1A3KN83 1393 aa11.17□□□□□ -0.62
UBE2F-204ENST00000409953 ZNF326Q5BKZ1 582 aaKnown RBP11.17□□□□□ -0.62
UBE2F-204ENST00000409953 PROM2Q8N271 834 aa11.17□□□□□ -0.62
UBE2F-204ENST00000409953 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
UBE2F-204ENST00000409953 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
UBE2F-204ENST00000409953 E9PCH4 1651 aa11.15□□□□□ -0.62
UBE2F-204ENST00000409953 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
UBE2F-204ENST00000409953 HSPA1AP0DMV8 641 aaKnown RBP11.14□□□□□ -0.63
UBE2F-204ENST00000409953 HSPA1BP0DMV9 641 aaKnown RBP11.14□□□□□ -0.63
UBE2F-204ENST00000409953 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
UBE2F-204ENST00000409953 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
UBE2F-204ENST00000409953 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
UBE2F-204ENST00000409953 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
UBE2F-204ENST00000409953 DAPK1P53355 1430 aa11.13□□□□□ -0.63
UBE2F-204ENST00000409953 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
UBE2F-204ENST00000409953 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
UBE2F-204ENST00000409953 TOMM70O94826 608 aa11.13□□□□□ -0.63
UBE2F-204ENST00000409953 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
UBE2F-204ENST00000409953 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
UBE2F-204ENST00000409953 FMN2Q9NZ56 1722 aa11.12□□□□□ -0.63
UBE2F-204ENST00000409953 TXNRD1Q16881 649 aa11.11□□□□□ -0.63
UBE2F-204ENST00000409953 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
UBE2F-204ENST00000409953 PEAK1Q9H792 1746 aa11.11□□□□□ -0.63
UBE2F-204ENST00000409953 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
UBE2F-204ENST00000409953 POLD1P28340 1107 aa11.1□□□□□ -0.63
UBE2F-204ENST00000409953 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
UBE2F-204ENST00000409953 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
UBE2F-204ENST00000409953 TOPAZ1Q8N9V7 1692 aa11.08□□□□□ -0.64
UBE2F-204ENST00000409953 ABCB7O75027 752 aa11.08□□□□□ -0.64
UBE2F-204ENST00000409953 CHRNA2Q15822 529 aa11.08□□□□□ -0.64
UBE2F-204ENST00000409953 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
UBE2F-204ENST00000409953 SSH2Q76I76 1423 aa11.08□□□□□ -0.64
UBE2F-204ENST00000409953 PARP4Q9UKK3 1724 aaKnown RBP11.07□□□□□ -0.64
UBE2F-204ENST00000409953 TCP11L2Q8N4U5 519 aa11.07□□□□□ -0.64
UBE2F-204ENST00000409953 KIAA0232Q92628 1395 aa11.06□□□□□ -0.64
UBE2F-204ENST00000409953 TULP4Q9NRJ4 1543 aa11.06□□□□□ -0.64
UBE2F-204ENST00000409953 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
UBE2F-204ENST00000409953 WAPLQ7Z5K2 1190 aa11.06□□□□□ -0.64
UBE2F-204ENST00000409953 ANKRD50Q9ULJ7 1429 aa11.06□□□□□ -0.64
UBE2F-204ENST00000409953 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
UBE2F-204ENST00000409953 CRYBG1Q9Y4K1 1723 aa11.06□□□□□ -0.64
UBE2F-204ENST00000409953 ATP7BP35670 1465 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms