RNA–Protein interactions for RNA: ENST00000409413.3

PRR35-201, Transcript of proline rich 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRR35, Length 2,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR35-201ENST00000409413 PDE3AQ14432 1141 aa29.72■■■□□ 2.35
PRR35-201ENST00000409413 AMER1Q5JTC6 1135 aaPredicted RBP29.71■■■□□ 2.35
PRR35-201ENST00000409413 CEP170BQ9Y4F5 1589 aaPredicted RBP29.7■■■□□ 2.34
PRR35-201ENST00000409413 AAMPQ13685 434 aa29.69■■■□□ 2.34
PRR35-201ENST00000409413 E9PSI1 815 aa29.68■■■□□ 2.34
PRR35-201ENST00000409413 SRPK2P78362 688 aaKnown RBP29.68■■■□□ 2.34
PRR35-201ENST00000409413 DLC1Q96QB1 1528 aa29.67■■■□□ 2.34
PRR35-201ENST00000409413 ANTXR1Q9H6X2 564 aa29.66■■■□□ 2.34
PRR35-201ENST00000409413 PUS7Q96PZ0 661 aaKnown RBP29.65■■■□□ 2.34
PRR35-201ENST00000409413 MED14O60244 1454 aa29.64■■■□□ 2.33
PRR35-201ENST00000409413 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
PRR35-201ENST00000409413 IGHDP01880 384 aa29.63■■■□□ 2.33
PRR35-201ENST00000409413 CLUAP1Q96AJ1 413 aa29.61■■■□□ 2.33
PRR35-201ENST00000409413 RRAGDQ9NQL2 400 aaPredicted RBP29.61■■■□□ 2.33
PRR35-201ENST00000409413 TECPR2O15040 1411 aa29.59■■■□□ 2.33
PRR35-201ENST00000409413 ROBO2Q9HCK4 1378 aa29.59■■■□□ 2.33
PRR35-201ENST00000409413 SETD1BQ9UPS6 1966 aaKnown RBP29.59■■■□□ 2.33
PRR35-201ENST00000409413 UPF2Q9HAU5 1272 aaKnown RBP29.59■■■□□ 2.33
PRR35-201ENST00000409413 PTPRUQ92729 1446 aa29.58■■■□□ 2.33
PRR35-201ENST00000409413 TBX22Q9Y458 520 aa29.58■■■□□ 2.33
PRR35-201ENST00000409413 BCAR3O75815 825 aa29.57■■■□□ 2.32
PRR35-201ENST00000409413 SIRT1Q96EB6 747 aa29.56■■■□□ 2.32
PRR35-201ENST00000409413 FSD2A1L4K1 749 aa29.56■■■□□ 2.32
PRR35-201ENST00000409413 FAM135BQ49AJ0 1406 aa29.55■■■□□ 2.32
PRR35-201ENST00000409413 NSD3Q9BZ95 1437 aa29.55■■■□□ 2.32
PRR35-201ENST00000409413 SEC24BO95487 1268 aa29.55■■■□□ 2.32
PRR35-201ENST00000409413 TBC1D32Q96NH3 1257 aa29.55■■■□□ 2.32
PRR35-201ENST00000409413 KNDC1Q76NI1 1749 aa29.54■■■□□ 2.32
PRR35-201ENST00000409413 PMFBP1Q8TBY8 1022 aa29.54■■■□□ 2.32
PRR35-201ENST00000409413 CPS1P31327 1500 aa29.54■■■□□ 2.32
PRR35-201ENST00000409413 ZNF142P52746 1687 aaPredicted RBP29.53■■■□□ 2.32
PRR35-201ENST00000409413 SPINK5Q9NQ38 1064 aaPredicted RBP29.53■■■□□ 2.32
PRR35-201ENST00000409413 AMOTL2Q9Y2J4 779 aa29.53■■■□□ 2.32
PRR35-201ENST00000409413 GLIPR1L2Q4G1C9 344 aa29.53■■■□□ 2.32
PRR35-201ENST00000409413 ANKLE2Q86XL3 938 aa29.53■■■□□ 2.32
PRR35-201ENST00000409413 ATAD2Q6PL18 1390 aa29.52■■■□□ 2.32
PRR35-201ENST00000409413 SLKQ9H2G2 1235 aaPredicted RBP29.52■■■□□ 2.32
PRR35-201ENST00000409413 APAF1O14727 1248 aa29.51■■■□□ 2.31
PRR35-201ENST00000409413 ANKRD36BQ8N2N9 1353 aa29.51■■■□□ 2.31
PRR35-201ENST00000409413 GOLGA6L3A6NEY3 463 aa29.51■■■□□ 2.31
PRR35-201ENST00000409413 WASLO00401 505 aaPredicted RBP29.51■■■□□ 2.31
PRR35-201ENST00000409413 CLCN1P35523 988 aa29.5■■■□□ 2.31
PRR35-201ENST00000409413 CABP1Q9NZU7 370 aa29.5■■■□□ 2.31
PRR35-201ENST00000409413 A0A1W2PP64 1363 aa29.47■■■□□ 2.31
PRR35-201ENST00000409413 TBC1D2Q9BYX2 928 aa29.47■■■□□ 2.31
PRR35-201ENST00000409413 XRCC6P12956 609 aaKnown RBP eCLIP29.46■■■□□ 2.31
PRR35-201ENST00000409413 CCDC146Q8IYE0 955 aa29.46■■■□□ 2.31
PRR35-201ENST00000409413 CD163L1Q9NR16 1453 aa29.45■■■□□ 2.3
PRR35-201ENST00000409413 ISY1Q9ULR0 285 aaKnown RBP29.44■■■□□ 2.3
PRR35-201ENST00000409413 NCKAP5LQ9HCH0 1330 aa29.44■■■□□ 2.3
PRR35-201ENST00000409413 MCM4P33991 863 aa29.44■■■□□ 2.3
PRR35-201ENST00000409413 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.42■■■□□ 2.3
PRR35-201ENST00000409413 CANXP27824 592 aaKnown RBP29.42■■■□□ 2.3
PRR35-201ENST00000409413 DIP2AQ14689 1571 aa29.42■■■□□ 2.3
PRR35-201ENST00000409413 PNNQ9H307 717 aaKnown RBP29.41■■■□□ 2.3
PRR35-201ENST00000409413 TERF2IPQ9NYB0 399 aa29.41■■■□□ 2.3
PRR35-201ENST00000409413 KCNA6P17658 529 aa29.41■■■□□ 2.3
PRR35-201ENST00000409413 COG6Q9Y2V7 657 aa29.41■■■□□ 2.3
PRR35-201ENST00000409413 TNNT2P45379 298 aaPredicted RBP29.4■■■□□ 2.3
PRR35-201ENST00000409413 NUDT16Q96DE0 195 aaKnown RBP29.4■■■□□ 2.3
PRR35-201ENST00000409413 POLR3AO14802 1390 aaPredicted RBP29.39■■■□□ 2.3
PRR35-201ENST00000409413 MORC1Q86VD1 984 aa29.39■■■□□ 2.29
PRR35-201ENST00000409413 MRE11P49959 708 aa29.38■■■□□ 2.29
PRR35-201ENST00000409413 PANK1Q8TE04 598 aa29.38■■■□□ 2.29
PRR35-201ENST00000409413 CHMP5Q9NZZ3 219 aa29.37■■■□□ 2.29
PRR35-201ENST00000409413 PRR36Q9H6K5 1346 aa29.37■■■□□ 2.29
PRR35-201ENST00000409413 NUTM2FA1L443 756 aa29.37■■■□□ 2.29
PRR35-201ENST00000409413 WWC1Q8IX03 1113 aa29.36■■■□□ 2.29
PRR35-201ENST00000409413 HDGFL2Q7Z4V5 671 aaPredicted RBP29.36■■■□□ 2.29
PRR35-201ENST00000409413 RRP9O43818 475 aaKnown RBP29.35■■■□□ 2.29
PRR35-201ENST00000409413 PTCH1Q13635 1447 aa29.35■■■□□ 2.29
PRR35-201ENST00000409413 PPIP5K1Q6PFW1 1433 aa29.34■■■□□ 2.29
PRR35-201ENST00000409413 USP32Q8NFA0 1604 aa29.34■■■□□ 2.29
PRR35-201ENST00000409413 KDM4FA0A1W2PPD8 638 aa29.34■■■□□ 2.29
PRR35-201ENST00000409413 RWDD1Q9H446 243 aaPredicted RBP29.34■■■□□ 2.29
PRR35-201ENST00000409413 DMRT2Q9Y5R5 561 aa29.34■■■□□ 2.29
PRR35-201ENST00000409413 CCDC61Q9Y6R9 512 aa29.34■■■□□ 2.29
PRR35-201ENST00000409413 XRN1Q8IZH2 1706 aaKnown RBP29.33■■■□□ 2.29
PRR35-201ENST00000409413 PDZRN3Q9UPQ7 1066 aa29.33■■■□□ 2.29
PRR35-201ENST00000409413 PIK3R4Q99570 1358 aa29.33■■■□□ 2.29
PRR35-201ENST00000409413 GGNBP2Q9H3C7 697 aa29.32■■■□□ 2.28
PRR35-201ENST00000409413 RARSP54136 660 aaKnown RBP29.32■■■□□ 2.28
PRR35-201ENST00000409413 NPHP4O75161 1426 aaPredicted RBP29.31■■■□□ 2.28
PRR35-201ENST00000409413 FYB1O15117 783 aa29.31■■■□□ 2.28
PRR35-201ENST00000409413 SHPRHQ149N8 1683 aa29.31■■■□□ 2.28
PRR35-201ENST00000409413 NAP1L5Q96NT1 182 aaPredicted RBP29.3■■■□□ 2.28
PRR35-201ENST00000409413 DDX11L8A8MPP1 907 aa29.3■■■□□ 2.28
PRR35-201ENST00000409413 ADGRB2O60241 1585 aa29.29■■■□□ 2.28
PRR35-201ENST00000409413 ATP7BP35670 1465 aa29.29■■■□□ 2.28
PRR35-201ENST00000409413 IQSEC2Q5JU85 1478 aa29.29■■■□□ 2.28
PRR35-201ENST00000409413 TRAK2O60296 914 aa29.29■■■□□ 2.28
PRR35-201ENST00000409413 RBM33Q96EV2 1170 aaKnown RBP29.29■■■□□ 2.28
PRR35-201ENST00000409413 PCDHB15Q9Y5E8 787 aa29.29■■■□□ 2.28
PRR35-201ENST00000409413 NCBP3Q53F19 620 aaKnown RBP29.29■■■□□ 2.28
PRR35-201ENST00000409413 HSP90AA1P07900 732 aaKnown RBP29.28■■■□□ 2.28
PRR35-201ENST00000409413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.28■■■□□ 2.28
PRR35-201ENST00000409413 PHF23Q9BUL5 403 aaPredicted RBP29.28■■■□□ 2.28
PRR35-201ENST00000409413 WDR63Q8IWG1 891 aa29.26■■■□□ 2.28
PRR35-201ENST00000409413 CPSF1Q10570 1443 aaKnown RBP29.26■■■□□ 2.27
PRR35-201ENST00000409413 NSD2O96028 1365 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms