RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CFAP70Q5T0N1 1121 aa13.56□□□□□ -0.24
NIF3L1-203ENST00000409129 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
NIF3L1-203ENST00000409129 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
NIF3L1-203ENST00000409129 DHX57Q6P158 1386 aaKnown RBP13.55□□□□□ -0.24
NIF3L1-203ENST00000409129 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
NIF3L1-203ENST00000409129 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
NIF3L1-203ENST00000409129 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-203ENST00000409129 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
NIF3L1-203ENST00000409129 TNS3Q68CZ2 1445 aa13.54□□□□□ -0.24
NIF3L1-203ENST00000409129 NRXN1Q9ULB1 1477 aa13.54□□□□□ -0.24
NIF3L1-203ENST00000409129 CHD4Q14839 1912 aa13.52□□□□□ -0.24
NIF3L1-203ENST00000409129 FAM83GA6ND36 823 aa13.52□□□□□ -0.25
NIF3L1-203ENST00000409129 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
NIF3L1-203ENST00000409129 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
NIF3L1-203ENST00000409129 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
NIF3L1-203ENST00000409129 CRYBG1Q9Y4K1 1723 aa13.51□□□□□ -0.25
NIF3L1-203ENST00000409129 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
NIF3L1-203ENST00000409129 PSME1Q06323 249 aa13.51□□□□□ -0.25
NIF3L1-203ENST00000409129 UTRNP46939 3433 aa13.51□□□□□ -0.25
NIF3L1-203ENST00000409129 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-203ENST00000409129 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
NIF3L1-203ENST00000409129 CAMKK2Q96RR4 588 aa13.5□□□□□ -0.25
NIF3L1-203ENST00000409129 POGKQ9P215 609 aa13.5□□□□□ -0.25
NIF3L1-203ENST00000409129 TRIM37O94972 964 aa13.49□□□□□ -0.25
NIF3L1-203ENST00000409129 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
NIF3L1-203ENST00000409129 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
NIF3L1-203ENST00000409129 ALS2Q96Q42 1657 aa13.48□□□□□ -0.25
NIF3L1-203ENST00000409129 SENP3-EIF4A1A0A087X0R7 540 aa13.48□□□□□ -0.25
NIF3L1-203ENST00000409129 MYOM1P52179 1685 aa13.47□□□□□ -0.25
NIF3L1-203ENST00000409129 BTG4Q9NY30 223 aa13.47□□□□□ -0.25
NIF3L1-203ENST00000409129 KDM2AQ9Y2K7 1162 aa13.47□□□□□ -0.25
NIF3L1-203ENST00000409129 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-203ENST00000409129 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 CASZ1Q86V15 1759 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 DLC1Q96QB1 1528 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 PMFBP1Q8TBY8 1022 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
NIF3L1-203ENST00000409129 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
NIF3L1-203ENST00000409129 SPATA31A5Q5VU36 1347 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 SPATA31A7Q8IWB4 1347 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 APBA3O96018 575 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 HIRIP3Q9BW71 556 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 ANKARQ7Z5J8 1434 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 ARHGEF10O15013 1369 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 NINLQ9Y2I6 1382 aa13.44□□□□□ -0.26
NIF3L1-203ENST00000409129 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
NIF3L1-203ENST00000409129 MINK1Q8N4C8 1332 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-203ENST00000409129 WASLO00401 505 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-203ENST00000409129 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
NIF3L1-203ENST00000409129 KCNQ2O43526 872 aa13.4□□□□□ -0.26
NIF3L1-203ENST00000409129 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
NIF3L1-203ENST00000409129 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
NIF3L1-203ENST00000409129 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
NIF3L1-203ENST00000409129 CEP350Q5VT06 3117 aa13.4□□□□□ -0.26
NIF3L1-203ENST00000409129 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
NIF3L1-203ENST00000409129 PHRF1Q9P1Y6 1649 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-203ENST00000409129 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
NIF3L1-203ENST00000409129 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
NIF3L1-203ENST00000409129 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
NIF3L1-203ENST00000409129 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-203ENST00000409129 TULP4Q9NRJ4 1543 aa13.37□□□□□ -0.27
NIF3L1-203ENST00000409129 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
NIF3L1-203ENST00000409129 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
NIF3L1-203ENST00000409129 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
NIF3L1-203ENST00000409129 NBPF8Q3BBV2 869 aa13.36□□□□□ -0.27
NIF3L1-203ENST00000409129 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
NIF3L1-203ENST00000409129 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-203ENST00000409129 NUDT16Q96DE0 195 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-203ENST00000409129 USP35Q9P2H5 1018 aa13.35□□□□□ -0.27
NIF3L1-203ENST00000409129 PEAK1Q9H792 1746 aa13.34□□□□□ -0.27
NIF3L1-203ENST00000409129 CHRNA2Q15822 529 aa13.34□□□□□ -0.27
NIF3L1-203ENST00000409129 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
NIF3L1-203ENST00000409129 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
NIF3L1-203ENST00000409129 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.27
NIF3L1-203ENST00000409129 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
NIF3L1-203ENST00000409129 CDK19Q9BWU1 502 aa13.33□□□□□ -0.28
NIF3L1-203ENST00000409129 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
NIF3L1-203ENST00000409129 ZBTB7AO95365 584 aa13.32□□□□□ -0.28
NIF3L1-203ENST00000409129 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
NIF3L1-203ENST00000409129 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
NIF3L1-203ENST00000409129 ATP7BP35670 1465 aa13.3□□□□□ -0.28
NIF3L1-203ENST00000409129 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
NIF3L1-203ENST00000409129 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
NIF3L1-203ENST00000409129 LMO7Q8WWI1 1683 aa13.29□□□□□ -0.28
NIF3L1-203ENST00000409129 PTGER2P43116 358 aa13.29□□□□□ -0.28
NIF3L1-203ENST00000409129 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
NIF3L1-203ENST00000409129 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
NIF3L1-203ENST00000409129 ACEP12821 1306 aa13.29□□□□□ -0.28
NIF3L1-203ENST00000409129 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
NIF3L1-203ENST00000409129 LRRC37A3O60309 1634 aa13.28□□□□□ -0.28
NIF3L1-203ENST00000409129 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
NIF3L1-203ENST00000409129 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
NIF3L1-203ENST00000409129 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
NIF3L1-203ENST00000409129 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
NIF3L1-203ENST00000409129 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms