RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 DCCP43146 1447 aa13.73□□□□□ -0.21
SNORD88C-201ENST00000408061 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
SNORD88C-201ENST00000408061 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
SNORD88C-201ENST00000408061 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
SNORD88C-201ENST00000408061 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.21
SNORD88C-201ENST00000408061 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
SNORD88C-201ENST00000408061 NRKQ7Z2Y5 1582 aa13.71□□□□□ -0.22
SNORD88C-201ENST00000408061 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
SNORD88C-201ENST00000408061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNORD88C-201ENST00000408061 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
SNORD88C-201ENST00000408061 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
SNORD88C-201ENST00000408061 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
SNORD88C-201ENST00000408061 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
SNORD88C-201ENST00000408061 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
SNORD88C-201ENST00000408061 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
SNORD88C-201ENST00000408061 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
SNORD88C-201ENST00000408061 TNNT2P45379 298 aaPredicted RBP13.67□□□□□ -0.22
SNORD88C-201ENST00000408061 HSPA2P54652 639 aa13.67□□□□□ -0.22
SNORD88C-201ENST00000408061 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 NME9Q86XW9 330 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 KIF1AQ12756 1690 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 SHPRHQ149N8 1683 aa13.66□□□□□ -0.22
SNORD88C-201ENST00000408061 ATF3P18847 181 aa13.65□□□□□ -0.22
SNORD88C-201ENST00000408061 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
SNORD88C-201ENST00000408061 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
SNORD88C-201ENST00000408061 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
SNORD88C-201ENST00000408061 COL3A1P02461 1466 aaPredicted RBP13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 MSH6P52701 1360 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 PSME1Q06323 249 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
SNORD88C-201ENST00000408061 FCHSD2O94868 740 aa13.62□□□□□ -0.23
SNORD88C-201ENST00000408061 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
SNORD88C-201ENST00000408061 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
SNORD88C-201ENST00000408061 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 NEFLP07196 543 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 NEFMP07197 916 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 ERICH6BQ5W0A0 696 aa13.61□□□□□ -0.23
SNORD88C-201ENST00000408061 NLRP6P59044 892 aa13.6□□□□□ -0.23
SNORD88C-201ENST00000408061 MST1RQ04912 1400 aa13.6□□□□□ -0.23
SNORD88C-201ENST00000408061 ZNF521Q96K83 1311 aa13.6□□□□□ -0.23
SNORD88C-201ENST00000408061 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
SNORD88C-201ENST00000408061 APAF1O14727 1248 aa13.58□□□□□ -0.24
SNORD88C-201ENST00000408061 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 IL13P35225 146 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 WDR63Q8IWG1 891 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 SBNO1A3KN83 1393 aa13.57□□□□□ -0.24
SNORD88C-201ENST00000408061 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 FLT4P35916 1363 aa13.56□□□□□ -0.24
SNORD88C-201ENST00000408061 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 E9PSI1 815 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 PLEKHF1Q96S99 279 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
SNORD88C-201ENST00000408061 FOXO3O43524 673 aa13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 IQSEC2Q5JU85 1478 aa13.54□□□□□ -0.24
SNORD88C-201ENST00000408061 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
SNORD88C-201ENST00000408061 AMPHP49418 695 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 IL16Q14005 1332 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
SNORD88C-201ENST00000408061 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 TMPOP42166 694 aaKnown RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
SNORD88C-201ENST00000408061 SLIT3O75094 1523 aa13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 USP19O94966 1318 aa13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
SNORD88C-201ENST00000408061 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms