RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
PTPN12-202ENST00000407343 CTHP32929 405 aa12.5□□□□□ -0.41
PTPN12-202ENST00000407343 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
PTPN12-202ENST00000407343 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
PTPN12-202ENST00000407343 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
PTPN12-202ENST00000407343 PPEF1O14829 653 aaPredicted RBP12.48□□□□□ -0.41
PTPN12-202ENST00000407343 VAC14Q08AM6 782 aa12.47□□□□□ -0.41
PTPN12-202ENST00000407343 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
PTPN12-202ENST00000407343 RNF223E7ERA6 249 aa12.46□□□□□ -0.41
PTPN12-202ENST00000407343 WASHC4Q2M389 1173 aa12.46□□□□□ -0.41
PTPN12-202ENST00000407343 PLA2G2CQ5R387 149 aa12.46□□□□□ -0.41
PTPN12-202ENST00000407343 FBXO45P0C2W1 286 aa12.45□□□□□ -0.42
PTPN12-202ENST00000407343 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
PTPN12-202ENST00000407343 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
PTPN12-202ENST00000407343 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
PTPN12-202ENST00000407343 GLMNQ92990 594 aa12.43□□□□□ -0.42
PTPN12-202ENST00000407343 ALG2Q9H553 416 aa12.43□□□□□ -0.42
PTPN12-202ENST00000407343 NR1H3Q13133 447 aa12.42□□□□□ -0.42
PTPN12-202ENST00000407343 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
PTPN12-202ENST00000407343 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
PTPN12-202ENST00000407343 GPKOWQ92917 476 aaPredicted RBP eCLIP12.42□□□□□ -0.42
PTPN12-202ENST00000407343 ZBBXA8MT70 800 aa12.41□□□□□ -0.42
PTPN12-202ENST00000407343 PDXDC2PQ6P474 469 aa12.41□□□□□ -0.42
PTPN12-202ENST00000407343 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
PTPN12-202ENST00000407343 ANKLE1Q8NAG6 615 aa12.41□□□□□ -0.42
PTPN12-202ENST00000407343 PNMA1Q8ND90 353 aa12.41□□□□□ -0.42
PTPN12-202ENST00000407343 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
PTPN12-202ENST00000407343 EMID1Q96A84 441 aaPredicted RBP12.4□□□□□ -0.42
PTPN12-202ENST00000407343 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
PTPN12-202ENST00000407343 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
PTPN12-202ENST00000407343 NBPF14Q5TI25 921 aa12.38□□□□□ -0.43
PTPN12-202ENST00000407343 BAP1Q92560 729 aa12.38□□□□□ -0.43
PTPN12-202ENST00000407343 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.38□□□□□ -0.43
PTPN12-202ENST00000407343 C4orf48Q5BLP8 95 aa12.37□□□□□ -0.43
PTPN12-202ENST00000407343 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
PTPN12-202ENST00000407343 ZNF511Q8NB15 262 aa12.35□□□□□ -0.43
PTPN12-202ENST00000407343 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
PTPN12-202ENST00000407343 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
PTPN12-202ENST00000407343 SOX11P35716 441 aa12.34□□□□□ -0.43
PTPN12-202ENST00000407343 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
PTPN12-202ENST00000407343 FOXJ1Q92949 421 aa12.34□□□□□ -0.43
PTPN12-202ENST00000407343 ARID3AQ99856 593 aa12.34□□□□□ -0.43
PTPN12-202ENST00000407343 GGCXP38435 758 aa12.33□□□□□ -0.44
PTPN12-202ENST00000407343 SH3BP2P78314 561 aa12.33□□□□□ -0.44
PTPN12-202ENST00000407343 PTK2Q05397 1052 aa12.33□□□□□ -0.44
PTPN12-202ENST00000407343 SKOR1P84550 965 aa12.32□□□□□ -0.44
PTPN12-202ENST00000407343 TRIM32Q13049 653 aa12.32□□□□□ -0.44
PTPN12-202ENST00000407343 ADAM32Q8TC27 787 aa12.32□□□□□ -0.44
PTPN12-202ENST00000407343 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
PTPN12-202ENST00000407343 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
PTPN12-202ENST00000407343 C1QTNF2Q9BXJ5 285 aa12.31□□□□□ -0.44
PTPN12-202ENST00000407343 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN12-202ENST00000407343 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
PTPN12-202ENST00000407343 RPIAP49247 311 aa12.28□□□□□ -0.44
PTPN12-202ENST00000407343 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
PTPN12-202ENST00000407343 CCDC97Q96F63 343 aaPredicted RBP12.28□□□□□ -0.44
PTPN12-202ENST00000407343 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
PTPN12-202ENST00000407343 A0A0G2JS52 829 aa12.26□□□□□ -0.45
PTPN12-202ENST00000407343 SEMA3FQ13275 785 aa12.26□□□□□ -0.45
PTPN12-202ENST00000407343 CFAP70Q5T0N1 1121 aa12.26□□□□□ -0.45
PTPN12-202ENST00000407343 BPHLQ86WA6 291 aaPredicted RBP12.26□□□□□ -0.45
PTPN12-202ENST00000407343 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
PTPN12-202ENST00000407343 WNT7BP56706 349 aa12.25□□□□□ -0.45
PTPN12-202ENST00000407343 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
PTPN12-202ENST00000407343 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
PTPN12-202ENST00000407343 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
PTPN12-202ENST00000407343 ZBTB24O43167 697 aaPredicted RBP12.24□□□□□ -0.45
PTPN12-202ENST00000407343 PHTF2Q8N3S3 785 aa12.24□□□□□ -0.45
PTPN12-202ENST00000407343 CEP126Q9P2H0 1117 aa12.24□□□□□ -0.45
PTPN12-202ENST00000407343 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
PTPN12-202ENST00000407343 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
PTPN12-202ENST00000407343 FAM174AQ8TBP5 190 aa12.23□□□□□ -0.45
PTPN12-202ENST00000407343 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
PTPN12-202ENST00000407343 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
PTPN12-202ENST00000407343 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
PTPN12-202ENST00000407343 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
PTPN12-202ENST00000407343 ARXQ96QS3 562 aa12.22□□□□□ -0.45
PTPN12-202ENST00000407343 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
PTPN12-202ENST00000407343 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
PTPN12-202ENST00000407343 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
PTPN12-202ENST00000407343 AGERQ15109 404 aa12.19□□□□□ -0.46
PTPN12-202ENST00000407343 MAFBQ9Y5Q3 323 aaPredicted RBP12.19□□□□□ -0.46
PTPN12-202ENST00000407343 SLC19A1P41440 591 aa12.18□□□□□ -0.46
PTPN12-202ENST00000407343 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
PTPN12-202ENST00000407343 ESPNB1AK53 854 aa12.17□□□□□ -0.46
PTPN12-202ENST00000407343 ATP9BO43861 1147 aa12.17□□□□□ -0.46
PTPN12-202ENST00000407343 VARSP26640 1264 aaKnown RBP12.17□□□□□ -0.46
PTPN12-202ENST00000407343 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
PTPN12-202ENST00000407343 DZIP3Q86Y13 1208 aaKnown RBP12.17□□□□□ -0.46
PTPN12-202ENST00000407343 SIAH2O43255 324 aa12.16□□□□□ -0.46
PTPN12-202ENST00000407343 CD2BP2O95400 341 aaKnown RBP12.16□□□□□ -0.46
PTPN12-202ENST00000407343 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
PTPN12-202ENST00000407343 GIGYF1O75420 1035 aaPredicted RBP12.15□□□□□ -0.46
PTPN12-202ENST00000407343 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
PTPN12-202ENST00000407343 ZNF592Q92610 1267 aa12.15□□□□□ -0.46
PTPN12-202ENST00000407343 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
PTPN12-202ENST00000407343 SLC10A4Q96EP9 437 aa12.14□□□□□ -0.47
PTPN12-202ENST00000407343 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
PTPN12-202ENST00000407343 MAP4K5Q9Y4K4 846 aa12.14□□□□□ -0.47
PTPN12-202ENST00000407343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms