RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 CDK12Q9NYV4 1490 aaPredicted RBP37.47■■■■□ 3.59
HDAC11-206ENST00000405025 ATRNO75882 1429 aa37.47■■■■□ 3.59
HDAC11-206ENST00000405025 RBM6P78332 1123 aaKnown RBP37.46■■■■□ 3.59
HDAC11-206ENST00000405025 EVC2Q86UK5 1308 aa37.45■■■■□ 3.59
HDAC11-206ENST00000405025 SLIT2O94813 1529 aa37.45■■■■□ 3.59
HDAC11-206ENST00000405025 TRPC5Q9UL62 973 aaPredicted RBP37.44■■■■□ 3.58
HDAC11-206ENST00000405025 RGS12O14924 1447 aa37.44■■■■□ 3.58
HDAC11-206ENST00000405025 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.43■■■■□ 3.58
HDAC11-206ENST00000405025 PLCH1Q4KWH8 1693 aa37.42■■■■□ 3.58
HDAC11-206ENST00000405025 CABP1Q9NZU7 370 aa37.39■■■■□ 3.58
HDAC11-206ENST00000405025 SBNO2Q9Y2G9 1366 aa37.36■■■■□ 3.57
HDAC11-206ENST00000405025 PHRF1Q9P1Y6 1649 aaKnown RBP37.36■■■■□ 3.57
HDAC11-206ENST00000405025 NUTM2GQ5VZR2 741 aa37.35■■■■□ 3.57
HDAC11-206ENST00000405025 UNC5CLQ8IV45 518 aa37.35■■■■□ 3.57
HDAC11-206ENST00000405025 NWD2Q9ULI1 1742 aa37.34■■■■□ 3.57
HDAC11-206ENST00000405025 FAM83GA6ND36 823 aa37.34■■■■□ 3.57
HDAC11-206ENST00000405025 USP6P35125 1406 aa37.29■■■■□ 3.56
HDAC11-206ENST00000405025 CLSPNQ9HAW4 1339 aa37.29■■■■□ 3.56
HDAC11-206ENST00000405025 GLI3P10071 1580 aa37.29■■■■□ 3.56
HDAC11-206ENST00000405025 NRAPQ86VF7 1730 aa37.28■■■■□ 3.56
HDAC11-206ENST00000405025 COL14A1Q05707 1796 aaKnown RBP37.28■■■■□ 3.56
HDAC11-206ENST00000405025 GJD4Q96KN9 370 aaPredicted RBP37.27■■■■□ 3.56
HDAC11-206ENST00000405025 ABTB2Q8N961 1025 aa37.26■■■■□ 3.56
HDAC11-206ENST00000405025 AKAP12Q02952 1782 aa37.26■■■■□ 3.56
HDAC11-206ENST00000405025 ATAD2Q6PL18 1390 aa37.26■■■■□ 3.55
HDAC11-206ENST00000405025 NRKQ7Z2Y5 1582 aa37.24■■■■□ 3.55
HDAC11-206ENST00000405025 SSH2Q76I76 1423 aa37.23■■■■□ 3.55
HDAC11-206ENST00000405025 BRD4O60885 1362 aaPredicted RBP37.21■■■■□ 3.55
HDAC11-206ENST00000405025 KIAA0232Q92628 1395 aa37.21■■■■□ 3.55
HDAC11-206ENST00000405025 USP19O94966 1318 aa37.2■■■■□ 3.55
HDAC11-206ENST00000405025 VPS72Q15906 364 aa37.2■■■■□ 3.55
HDAC11-206ENST00000405025 BTG4Q9NY30 223 aa37.2■■■■□ 3.55
HDAC11-206ENST00000405025 PIK3C2AO00443 1686 aa37.19■■■■□ 3.54
HDAC11-206ENST00000405025 ST20-MTHFSA0A0A6YYL1 179 aa37.19■■■■□ 3.54
HDAC11-206ENST00000405025 PRDM11Q9NQV5 511 aa37.19■■■■□ 3.54
HDAC11-206ENST00000405025 TESK2Q96S53 571 aa37.18■■■■□ 3.54
HDAC11-206ENST00000405025 UPF1Q92900 1129 aaKnown RBP eCLIP37.17■■■■□ 3.548e-9■■■■■ 30.2
HDAC11-206ENST00000405025 CPSF1Q10570 1443 aaKnown RBP37.17■■■■□ 3.54
HDAC11-206ENST00000405025 ZC3H6P61129 1189 aaKnown RBP37.16■■■■□ 3.54
HDAC11-206ENST00000405025 TIMELESSQ9UNS1 1208 aa37.16■■■■□ 3.54
HDAC11-206ENST00000405025 CHRNA2Q15822 529 aa37.15■■■■□ 3.54
HDAC11-206ENST00000405025 CCER1Q8TC90 406 aaPredicted RBP37.15■■■■□ 3.54
HDAC11-206ENST00000405025 MON2Q7Z3U7 1717 aa37.14■■■■□ 3.54
HDAC11-206ENST00000405025 USP47Q96K76 1375 aa37.14■■■■□ 3.54
HDAC11-206ENST00000405025 NLRP13Q86W25 1043 aa37.13■■■■□ 3.53
HDAC11-206ENST00000405025 CCDC9Q9Y3X0 531 aaKnown RBP37.13■■■■□ 3.53
HDAC11-206ENST00000405025 CD163L1Q9NR16 1453 aa37.12■■■■□ 3.53
HDAC11-206ENST00000405025 ZNF692Q9BU19 519 aaPredicted RBP37.11■■■■□ 3.53
HDAC11-206ENST00000405025 TTC21BQ7Z4L5 1316 aa37.1■■■■□ 3.53
HDAC11-206ENST00000405025 KTN1Q86UP2 1357 aaKnown RBP37.1■■■■□ 3.53
HDAC11-206ENST00000405025 NLRP6P59044 892 aa37.09■■■■□ 3.53
HDAC11-206ENST00000405025 SLIT3O75094 1523 aa37.09■■■■□ 3.53
HDAC11-206ENST00000405025 GCP02774 474 aa37.07■■■■□ 3.52
HDAC11-206ENST00000405025 TMC1Q8TDI8 760 aa37.07■■■■□ 3.52
HDAC11-206ENST00000405025 BRWD3Q6RI45 1802 aa37.07■■■■□ 3.52
HDAC11-206ENST00000405025 CPDO75976 1380 aa37.06■■■■□ 3.52
HDAC11-206ENST00000405025 SLC12A5Q9H2X9 1139 aa37.06■■■■□ 3.52
HDAC11-206ENST00000405025 LMO7Q8WWI1 1683 aa37.05■■■■□ 3.52
HDAC11-206ENST00000405025 PUS7Q96PZ0 661 aaKnown RBP37.03■■■■□ 3.52
HDAC11-206ENST00000405025 CAMTA1Q9Y6Y1 1673 aa37.02■■■■□ 3.52
HDAC11-206ENST00000405025 SEPT12Q8IYM1 358 aa37.02■■■■□ 3.52
HDAC11-206ENST00000405025 TTC21AQ8NDW8 1320 aa37.02■■■■□ 3.52
HDAC11-206ENST00000405025 SPATA31A5Q5VU36 1347 aa37.01■■■■□ 3.52
HDAC11-206ENST00000405025 SPATA31A7Q8IWB4 1347 aa37.01■■■■□ 3.52
HDAC11-206ENST00000405025 ONECUT3O60422 494 aaPredicted RBP36.99■■■■□ 3.51
HDAC11-206ENST00000405025 STRN4Q9NRL3 753 aa36.99■■■■□ 3.51
HDAC11-206ENST00000405025 A0A1W2PP64 1363 aa36.98■■■■□ 3.51
HDAC11-206ENST00000405025 FAM98CQ17RN3 349 aaKnown RBP36.97■■■■□ 3.51
HDAC11-206ENST00000405025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.97■■■■□ 3.51
HDAC11-206ENST00000405025 ZRANB1Q9UGI0 708 aa36.96■■■■□ 3.51
HDAC11-206ENST00000405025 HDGFL2Q7Z4V5 671 aaPredicted RBP36.95■■■■□ 3.51
HDAC11-206ENST00000405025 ZBTB7CA1YPR0 619 aa36.94■■■■□ 3.5
HDAC11-206ENST00000405025 SPATA31A1Q5TZJ5 1347 aa36.92■■■■□ 3.5
HDAC11-206ENST00000405025 NME9Q86XW9 330 aa36.92■■■■□ 3.5
HDAC11-206ENST00000405025 USP54Q70EL1 1684 aa36.92■■■■□ 3.5
HDAC11-206ENST00000405025 EDC4Q6P2E9 1401 aaKnown RBP36.92■■■■□ 3.5
HDAC11-206ENST00000405025 COL18A1P39060 1754 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 NFAT5O94916 1531 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 THSD7AQ9UPZ6 1657 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 SLC24A1O60721 1099 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 TMF1P82094 1093 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 TERF2IPQ9NYB0 399 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 NINLQ9Y2I6 1382 aa36.91■■■■□ 3.5
HDAC11-206ENST00000405025 EP400Q96L91 3159 aa36.9■■■■□ 3.5
HDAC11-206ENST00000405025 A0A0G2JS52 829 aa36.9■■■■□ 3.5
HDAC11-206ENST00000405025 SOX12O15370 315 aa36.9■■■■□ 3.5
HDAC11-206ENST00000405025 MYT1Q01538 1121 aa36.9■■■■□ 3.5
HDAC11-206ENST00000405025 COL5A2P05997 1499 aaPredicted RBP36.89■■■■□ 3.5
HDAC11-206ENST00000405025 EVA1CP58658 441 aa36.89■■■■□ 3.5
HDAC11-206ENST00000405025 LARP1Q6PKG0 1096 aaKnown RBP36.88■■■■□ 3.49
HDAC11-206ENST00000405025 AATKQ6ZMQ8 1374 aa36.88■■■■□ 3.49
HDAC11-206ENST00000405025 USP31Q70CQ4 1352 aa36.88■■■■□ 3.49
HDAC11-206ENST00000405025 KRT27Q7Z3Y8 459 aa36.84■■■■□ 3.49
HDAC11-206ENST00000405025 KCNH5Q8NCM2 988 aa36.84■■■■□ 3.49
HDAC11-206ENST00000405025 USP35Q9P2H5 1018 aa36.84■■■■□ 3.49
HDAC11-206ENST00000405025 ARHGEF25Q86VW2 580 aa36.83■■■■□ 3.49
HDAC11-206ENST00000405025 RGPD5Q99666 1765 aa36.81■■■■□ 3.48
HDAC11-206ENST00000405025 AXIN2Q9Y2T1 843 aa36.81■■■■□ 3.48
HDAC11-206ENST00000405025 ANKRD36BQ8N2N9 1353 aa36.79■■■■□ 3.48
HDAC11-206ENST00000405025 OVOS2A0A0J9YW53 1432 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms