RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ADGRB1O14514 1584 aa21.44■■□□□ 1.02
VAMP1-203ENST00000400911 HRCP23327 699 aa21.43■■□□□ 1.02
VAMP1-203ENST00000400911 EIF3AQ14152 1382 aaKnown RBP21.43■■□□□ 1.02
VAMP1-203ENST00000400911 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
VAMP1-203ENST00000400911 PRDM11Q9NQV5 511 aa21.42■■□□□ 1.02
VAMP1-203ENST00000400911 ADGRB2O60241 1585 aa21.4■■□□□ 1.02
VAMP1-203ENST00000400911 ABCA3Q99758 1704 aa21.4■■□□□ 1.02
VAMP1-203ENST00000400911 CHRNA2Q15822 529 aa21.38■■□□□ 1.01
VAMP1-203ENST00000400911 NUDT16Q96DE0 195 aaKnown RBP21.38■■□□□ 1.01
VAMP1-203ENST00000400911 TULP4Q9NRJ4 1543 aa21.38■■□□□ 1.01
VAMP1-203ENST00000400911 R3HDM1Q15032 1099 aaKnown RBP21.37■■□□□ 1.01
VAMP1-203ENST00000400911 TRPM3Q9HCF6 1732 aaPredicted RBP21.37■■□□□ 1.01
VAMP1-203ENST00000400911 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
VAMP1-203ENST00000400911 NUTM2GQ5VZR2 741 aa21.36■■□□□ 1.01
VAMP1-203ENST00000400911 STRN4Q9NRL3 753 aa21.36■■□□□ 1.01
VAMP1-203ENST00000400911 NRAPQ86VF7 1730 aa21.35■■□□□ 1.01
VAMP1-203ENST00000400911 SPATA31A1Q5TZJ5 1347 aa21.35■■□□□ 1.01
VAMP1-203ENST00000400911 ZC3H6P61129 1189 aaKnown RBP21.35■■□□□ 1.01
VAMP1-203ENST00000400911 EZH2Q15910 746 aaKnown RBP21.35■■□□□ 1.01
VAMP1-203ENST00000400911 STAC3Q96MF2 364 aa21.35■■□□□ 1.01
VAMP1-203ENST00000400911 COL14A1Q05707 1796 aaKnown RBP21.34■■□□□ 1.01
VAMP1-203ENST00000400911 ALS2Q96Q42 1657 aa21.34■■□□□ 1.01
VAMP1-203ENST00000400911 TRIM37O94972 964 aa21.33■■□□□ 1.01
VAMP1-203ENST00000400911 CDK19Q9BWU1 502 aa21.33■■□□□ 1.01
VAMP1-203ENST00000400911 FAM196AQ6ZSG2 479 aa21.32■■□□□ 1
VAMP1-203ENST00000400911 USP35Q9P2H5 1018 aa21.32■■□□□ 1
VAMP1-203ENST00000400911 LRP5O75197 1615 aa21.32■■□□□ 1
VAMP1-203ENST00000400911 CAMKK2Q96RR4 588 aa21.31■■□□□ 1
VAMP1-203ENST00000400911 DISP2A7MBM2 1401 aa21.3■■□□□ 1
VAMP1-203ENST00000400911 EVA1CP58658 441 aa21.3■■□□□ 1
VAMP1-203ENST00000400911 NBPF8Q3BBV2 869 aa21.3■■□□□ 1
VAMP1-203ENST00000400911 ACEP12821 1306 aa21.29■■□□□ 1
VAMP1-203ENST00000400911 ATP7BP35670 1465 aa21.28■■□□□ 1
VAMP1-203ENST00000400911 APBA3O96018 575 aa21.28■■□□□ 1
VAMP1-203ENST00000400911 CCDC61Q9Y6R9 512 aa21.28■■□□□ 1
VAMP1-203ENST00000400911 THSD7AQ9UPZ6 1657 aa21.27■■□□□ 1
VAMP1-203ENST00000400911 PDE3BQ13370 1112 aa21.26■□□□□ 0.99
VAMP1-203ENST00000400911 POLR3AO14802 1390 aaPredicted RBP21.25■□□□□ 0.99
VAMP1-203ENST00000400911 PLEKHG3A1L390 1219 aa21.25■□□□□ 0.99
VAMP1-203ENST00000400911 LARP1Q6PKG0 1096 aaKnown RBP21.25■□□□□ 0.99
VAMP1-203ENST00000400911 BARGINQ6ZT62 677 aa21.25■□□□□ 0.99
VAMP1-203ENST00000400911 ABTB2Q8N961 1025 aa21.25■□□□□ 0.99
VAMP1-203ENST00000400911 SSH2Q76I76 1423 aa21.22■□□□□ 0.99
VAMP1-203ENST00000400911 RGPD1P0DJD0 1748 aa21.22■□□□□ 0.99
VAMP1-203ENST00000400911 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
VAMP1-203ENST00000400911 TCP11L2Q8N4U5 519 aa21.22■□□□□ 0.99
VAMP1-203ENST00000400911 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
VAMP1-203ENST00000400911 PARD3Q8TEW0 1356 aa21.2■□□□□ 0.98
VAMP1-203ENST00000400911 GCP02774 474 aa21.19■□□□□ 0.98
VAMP1-203ENST00000400911 USP19O94966 1318 aa21.18■□□□□ 0.98
VAMP1-203ENST00000400911 CPDO75976 1380 aa21.18■□□□□ 0.98
VAMP1-203ENST00000400911 SRPK2P78362 688 aaKnown RBP21.17■□□□□ 0.98
VAMP1-203ENST00000400911 NBPF14Q5TI25 921 aa21.17■□□□□ 0.98
VAMP1-203ENST00000400911 NLRP13Q86W25 1043 aa21.17■□□□□ 0.98
VAMP1-203ENST00000400911 THRAP3Q9Y2W1 955 aaKnown RBP21.17■□□□□ 0.98
VAMP1-203ENST00000400911 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
VAMP1-203ENST00000400911 TNS1Q9HBL0 1735 aaKnown RBP21.16■□□□□ 0.98
VAMP1-203ENST00000400911 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
VAMP1-203ENST00000400911 ARHGEF28Q8N1W1 1705 aaKnown RBP21.15■□□□□ 0.98
VAMP1-203ENST00000400911 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
VAMP1-203ENST00000400911 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.97
VAMP1-203ENST00000400911 PPIP5K1Q6PFW1 1433 aa21.12■□□□□ 0.97
VAMP1-203ENST00000400911 ITSN1Q15811 1721 aa21.12■□□□□ 0.97
VAMP1-203ENST00000400911 CABP1Q9NZU7 370 aa21.11■□□□□ 0.97
VAMP1-203ENST00000400911 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
VAMP1-203ENST00000400911 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
VAMP1-203ENST00000400911 NLRP6P59044 892 aa21.1■□□□□ 0.97
VAMP1-203ENST00000400911 COL5A2P05997 1499 aaPredicted RBP21.08■□□□□ 0.97
VAMP1-203ENST00000400911 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
VAMP1-203ENST00000400911 SPON1Q9HCB6 807 aa21.07■□□□□ 0.96
VAMP1-203ENST00000400911 PPP1R1BQ9UD71 204 aaPredicted RBP21.07■□□□□ 0.96
VAMP1-203ENST00000400911 TOPAZ1Q8N9V7 1692 aa21.07■□□□□ 0.96
VAMP1-203ENST00000400911 LMO7Q8WWI1 1683 aa21.06■□□□□ 0.96
VAMP1-203ENST00000400911 CRB1P82279 1406 aa21.06■□□□□ 0.96
VAMP1-203ENST00000400911 KCNQ2O43526 872 aa21.06■□□□□ 0.96
VAMP1-203ENST00000400911 AATKQ6ZMQ8 1374 aa21.06■□□□□ 0.96
VAMP1-203ENST00000400911 YY1P25490 414 aa21.05■□□□□ 0.96
VAMP1-203ENST00000400911 DDB1Q16531 1140 aa21.05■□□□□ 0.96
VAMP1-203ENST00000400911 TOM1L2Q6ZVM7 507 aa21.05■□□□□ 0.96
VAMP1-203ENST00000400911 BRD4O60885 1362 aaPredicted RBP21.05■□□□□ 0.96
VAMP1-203ENST00000400911 PTF1AQ7RTS3 328 aa21.04■□□□□ 0.96
VAMP1-203ENST00000400911 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
VAMP1-203ENST00000400911 OVOS2A0A0G2JMS6 1433 aa21.03■□□□□ 0.96
VAMP1-203ENST00000400911 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
VAMP1-203ENST00000400911 USP6P35125 1406 aa21.03■□□□□ 0.96
VAMP1-203ENST00000400911 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
VAMP1-203ENST00000400911 PLSCR1O15162 318 aa21.02■□□□□ 0.96
VAMP1-203ENST00000400911 BCL11BQ9C0K0 894 aaPredicted RBP21.01■□□□□ 0.95
VAMP1-203ENST00000400911 RREB1Q92766 1687 aa21■□□□□ 0.95
VAMP1-203ENST00000400911 ANO8Q9HCE9 1232 aaPredicted RBP21■□□□□ 0.95
VAMP1-203ENST00000400911 MARCH10Q8NA82 808 aaPredicted RBP20.99■□□□□ 0.95
VAMP1-203ENST00000400911 WDR17Q8IZU2 1322 aa20.99■□□□□ 0.95
VAMP1-203ENST00000400911 NUP188Q5SRE5 1749 aa20.98■□□□□ 0.95
VAMP1-203ENST00000400911 KIAA1210Q9ULL0 1709 aa20.98■□□□□ 0.95
VAMP1-203ENST00000400911 SOX12O15370 315 aa20.98■□□□□ 0.95
VAMP1-203ENST00000400911 PROM2Q8N271 834 aa20.98■□□□□ 0.95
VAMP1-203ENST00000400911 EVC2Q86UK5 1308 aa20.98■□□□□ 0.95
VAMP1-203ENST00000400911 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
VAMP1-203ENST00000400911 L3MBTL2Q969R5 705 aa20.97■□□□□ 0.95
VAMP1-203ENST00000400911 PDGFDQ9GZP0 370 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms