RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 PLEKHG5O94827 1062 aa34.47■■■■□ 3.11
RSPO4-202ENST00000400634 ACEP12821 1306 aa34.47■■■■□ 3.11
RSPO4-202ENST00000400634 UNC5CLQ8IV45 518 aa34.46■■■■□ 3.11
RSPO4-202ENST00000400634 EVC2Q86UK5 1308 aa34.45■■■■□ 3.11
RSPO4-202ENST00000400634 PLCH1Q4KWH8 1693 aa34.44■■■■□ 3.1
RSPO4-202ENST00000400634 CABP2Q9NPB3 220 aa34.44■■■■□ 3.1
RSPO4-202ENST00000400634 PPIP5K1Q6PFW1 1433 aa34.44■■■■□ 3.1
RSPO4-202ENST00000400634 CRYBG1Q9Y4K1 1723 aa34.43■■■■□ 3.1
RSPO4-202ENST00000400634 RALGAPBQ86X10 1494 aa34.42■■■■□ 3.1
RSPO4-202ENST00000400634 GJD4Q96KN9 370 aaPredicted RBP34.39■■■■□ 3.1
RSPO4-202ENST00000400634 CARD11Q9BXL7 1154 aa34.39■■■■□ 3.1
RSPO4-202ENST00000400634 COL14A1Q05707 1796 aaKnown RBP34.36■■■■□ 3.09
RSPO4-202ENST00000400634 BRD4O60885 1362 aaPredicted RBP34.36■■■■□ 3.09
RSPO4-202ENST00000400634 FAM83GA6ND36 823 aa34.34■■■■□ 3.09
RSPO4-202ENST00000400634 UPF1Q92900 1129 aaKnown RBP eCLIP34.34■■■■□ 3.09
RSPO4-202ENST00000400634 SBNO2Q9Y2G9 1366 aa34.34■■■■□ 3.09
RSPO4-202ENST00000400634 PHRF1Q9P1Y6 1649 aaKnown RBP34.33■■■■□ 3.09
RSPO4-202ENST00000400634 VPS72Q15906 364 aa34.31■■■■□ 3.08
RSPO4-202ENST00000400634 CABP1Q9NZU7 370 aa34.31■■■■□ 3.08
RSPO4-202ENST00000400634 ABTB2Q8N961 1025 aa34.3■■■■□ 3.08
RSPO4-202ENST00000400634 GLI3P10071 1580 aa34.3■■■■□ 3.08
RSPO4-202ENST00000400634 NRAPQ86VF7 1730 aa34.3■■■■□ 3.08
RSPO4-202ENST00000400634 ATAD2Q6PL18 1390 aa34.28■■■■□ 3.08
RSPO4-202ENST00000400634 PRDM11Q9NQV5 511 aa34.26■■■■□ 3.08
RSPO4-202ENST00000400634 BTG4Q9NY30 223 aa34.26■■■■□ 3.08
RSPO4-202ENST00000400634 USP6P35125 1406 aa34.26■■■■□ 3.07
RSPO4-202ENST00000400634 NUTM2GQ5VZR2 741 aa34.25■■■■□ 3.07
RSPO4-202ENST00000400634 CCDC9Q9Y3X0 531 aaKnown RBP34.24■■■■□ 3.07
RSPO4-202ENST00000400634 CLSPNQ9HAW4 1339 aa34.24■■■■□ 3.07
RSPO4-202ENST00000400634 AKAP12Q02952 1782 aa34.23■■■■□ 3.07
RSPO4-202ENST00000400634 NLRP13Q86W25 1043 aa34.23■■■■□ 3.07
RSPO4-202ENST00000400634 ZNF692Q9BU19 519 aaPredicted RBP34.21■■■■□ 3.07
RSPO4-202ENST00000400634 KIAA0232Q92628 1395 aa34.21■■■■□ 3.07
RSPO4-202ENST00000400634 NRKQ7Z2Y5 1582 aa34.19■■■■□ 3.06
RSPO4-202ENST00000400634 USP19O94966 1318 aa34.19■■■■□ 3.06
RSPO4-202ENST00000400634 PCGF6Q9BYE7 350 aa34.18■■■■□ 3.06
RSPO4-202ENST00000400634 BRWD3Q6RI45 1802 aa34.16■■■■□ 3.06
RSPO4-202ENST00000400634 SSH2Q76I76 1423 aa34.16■■■■□ 3.06
RSPO4-202ENST00000400634 ZC3H6P61129 1189 aaKnown RBP34.16■■■■□ 3.06
RSPO4-202ENST00000400634 TIMELESSQ9UNS1 1208 aa34.16■■■■□ 3.06
RSPO4-202ENST00000400634 EP400Q96L91 3159 aa34.16■■■■□ 3.06
RSPO4-202ENST00000400634 ONECUT3O60422 494 aaPredicted RBP34.14■■■■□ 3.06
RSPO4-202ENST00000400634 SLC24A1O60721 1099 aa34.14■■■■□ 3.06
RSPO4-202ENST00000400634 CPDO75976 1380 aa34.13■■■■□ 3.05
RSPO4-202ENST00000400634 SEPT12Q8IYM1 358 aa34.12■■■■□ 3.05
RSPO4-202ENST00000400634 PIK3C2AO00443 1686 aa34.12■■■■□ 3.05
RSPO4-202ENST00000400634 CPSF1Q10570 1443 aaKnown RBP34.12■■■■□ 3.05
RSPO4-202ENST00000400634 GCP02774 474 aa34.11■■■■□ 3.05
RSPO4-202ENST00000400634 NLRP6P59044 892 aa34.11■■■■□ 3.05
RSPO4-202ENST00000400634 CHRNA2Q15822 529 aa34.11■■■■□ 3.05
RSPO4-202ENST00000400634 PUS7Q96PZ0 661 aaKnown RBP34.11■■■■□ 3.05
RSPO4-202ENST00000400634 MON2Q7Z3U7 1717 aa34.1■■■■□ 3.05
RSPO4-202ENST00000400634 TTC21AQ8NDW8 1320 aa34.09■■■■□ 3.05
RSPO4-202ENST00000400634 KTN1Q86UP2 1357 aaKnown RBP34.09■■■■□ 3.05
RSPO4-202ENST00000400634 SPATA31A5Q5VU36 1347 aa34.08■■■■□ 3.05
RSPO4-202ENST00000400634 SPATA31A7Q8IWB4 1347 aa34.08■■■■□ 3.05
RSPO4-202ENST00000400634 SLIT3O75094 1523 aa34.08■■■■□ 3.05
RSPO4-202ENST00000400634 TTC21BQ7Z4L5 1316 aa34.07■■■■□ 3.05
RSPO4-202ENST00000400634 ST20-MTHFSA0A0A6YYL1 179 aa34.06■■■■□ 3.04
RSPO4-202ENST00000400634 LMO7Q8WWI1 1683 aa34.06■■■■□ 3.04
RSPO4-202ENST00000400634 CCDC125Q86Z20 511 aa34.05■■■■□ 3.04
RSPO4-202ENST00000400634 A0A0G2JS52 829 aa34.04■■■■□ 3.04
RSPO4-202ENST00000400634 MYT1Q01538 1121 aa34.04■■■■□ 3.04
RSPO4-202ENST00000400634 FAM98CQ17RN3 349 aaKnown RBP34.04■■■■□ 3.04
RSPO4-202ENST00000400634 EVA1CP58658 441 aa34.03■■■■□ 3.04
RSPO4-202ENST00000400634 TMC1Q8TDI8 760 aa34.03■■■■□ 3.04
RSPO4-202ENST00000400634 TESK2Q96S53 571 aa34.03■■■■□ 3.04
RSPO4-202ENST00000400634 STRN4Q9NRL3 753 aa34.03■■■■□ 3.04
RSPO4-202ENST00000400634 CAMTA1Q9Y6Y1 1673 aa34.02■■■■□ 3.04
RSPO4-202ENST00000400634 KRT27Q7Z3Y8 459 aa34.01■■■■□ 3.03
RSPO4-202ENST00000400634 SPATA31A1Q5TZJ5 1347 aa34.01■■■■□ 3.03
RSPO4-202ENST00000400634 HDGFL2Q7Z4V5 671 aaPredicted RBP34■■■■□ 3.03
RSPO4-202ENST00000400634 USP47Q96K76 1375 aa33.99■■■■□ 3.03
RSPO4-202ENST00000400634 NINLQ9Y2I6 1382 aa33.99■■■■□ 3.03
RSPO4-202ENST00000400634 CD163L1Q9NR16 1453 aa33.99■■■■□ 3.03
RSPO4-202ENST00000400634 KCNH5Q8NCM2 988 aa33.98■■■■□ 3.03
RSPO4-202ENST00000400634 TERF2IPQ9NYB0 399 aa33.98■■■■□ 3.03
RSPO4-202ENST00000400634 THSD7AQ9UPZ6 1657 aa33.97■■■■□ 3.03
RSPO4-202ENST00000400634 SLC12A5Q9H2X9 1139 aa33.97■■■■□ 3.03
RSPO4-202ENST00000400634 AATKQ6ZMQ8 1374 aa33.95■■■■□ 3.02
RSPO4-202ENST00000400634 USP54Q70EL1 1684 aa33.94■■■■□ 3.02
RSPO4-202ENST00000400634 CCER1Q8TC90 406 aaPredicted RBP33.93■■■■□ 3.02
RSPO4-202ENST00000400634 BLMP54132 1417 aaPredicted RBP33.93■■■■□ 3.02
RSPO4-202ENST00000400634 EDC4Q6P2E9 1401 aaKnown RBP33.93■■■■□ 3.02
RSPO4-202ENST00000400634 COL5A2P05997 1499 aaPredicted RBP33.93■■■■□ 3.02
RSPO4-202ENST00000400634 COL18A1P39060 1754 aa33.91■■■■□ 3.02
RSPO4-202ENST00000400634 ZBTB7CA1YPR0 619 aa33.91■■■■□ 3.02
RSPO4-202ENST00000400634 TMF1P82094 1093 aa33.91■■■■□ 3.02
RSPO4-202ENST00000400634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.91■■■■□ 3.02
RSPO4-202ENST00000400634 A0A1W2PP64 1363 aa33.9■■■■□ 3.02
RSPO4-202ENST00000400634 USP31Q70CQ4 1352 aa33.9■■■■□ 3.02
RSPO4-202ENST00000400634 LARP1Q6PKG0 1096 aaKnown RBP33.9■■■■□ 3.02
RSPO4-202ENST00000400634 BARGINQ6ZT62 677 aa33.89■■■■□ 3.02
RSPO4-202ENST00000400634 USP35Q9P2H5 1018 aa33.89■■■■□ 3.02
RSPO4-202ENST00000400634 ARHGEF25Q86VW2 580 aa33.87■■■■□ 3.01
RSPO4-202ENST00000400634 TCP11L2Q8N4U5 519 aa33.87■■■■□ 3.01
RSPO4-202ENST00000400634 THRAP3Q9Y2W1 955 aaKnown RBP33.87■■■■□ 3.01
RSPO4-202ENST00000400634 NFAT5O94916 1531 aa33.86■■■■□ 3.01
RSPO4-202ENST00000400634 SF3B2Q13435 895 aaKnown RBP33.86■■■■□ 3.01
RSPO4-202ENST00000400634 CDCA8Q53HL2 280 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms