RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SLC52A1Q9NWF4 448 aa15.86■□□□□ 0.13
PPP4R1-202ENST00000400555 KIF16BQ96L93 1317 aa15.86■□□□□ 0.13
PPP4R1-202ENST00000400555 FOXD4L5Q5VV16 416 aaPredicted RBP15.86■□□□□ 0.13
PPP4R1-202ENST00000400555 FOXD4L4Q8WXT5 416 aaPredicted RBP15.86■□□□□ 0.13
PPP4R1-202ENST00000400555 COG3Q96JB2 828 aa15.86■□□□□ 0.13
PPP4R1-202ENST00000400555 GOLGA6L3A6NEY3 463 aa15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 TWISTNBQ3B726 338 aaPredicted RBP15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 ZNF518AQ6AHZ1 1483 aa15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 ATAD2Q6PL18 1390 aa15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 POLKQ9UBT6 870 aa15.85■□□□□ 0.13
PPP4R1-202ENST00000400555 CCDC27Q2M243 656 aa15.84■□□□□ 0.13
PPP4R1-202ENST00000400555 ABCA6Q8N139 1617 aa15.84■□□□□ 0.13
PPP4R1-202ENST00000400555 CHMP5Q9NZZ3 219 aa15.83■□□□□ 0.13
PPP4R1-202ENST00000400555 NOL8Q76FK4 1167 aaKnown RBP15.83■□□□□ 0.12
PPP4R1-202ENST00000400555 LTV1Q96GA3 475 aaPredicted RBP15.83■□□□□ 0.12
PPP4R1-202ENST00000400555 TRAK2O60296 914 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 SULT6B1Q6IMI4 303 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 LAMC1P11047 1609 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 IQGAP1P46940 1657 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 MAP3K4Q9Y6R4 1608 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 FCHSD2O94868 740 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 MCM4P33991 863 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 MCM10Q7L590 875 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
PPP4R1-202ENST00000400555 PANK2Q9BZ23 570 aa15.81■□□□□ 0.12
PPP4R1-202ENST00000400555 ZBTB40Q9NUA8 1239 aa15.81■□□□□ 0.12
PPP4R1-202ENST00000400555 UHRF1BP1LA0JNW5 1464 aa15.81■□□□□ 0.12
PPP4R1-202ENST00000400555 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
PPP4R1-202ENST00000400555 TET3O43151 1660 aa15.81■□□□□ 0.12
PPP4R1-202ENST00000400555 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
PPP4R1-202ENST00000400555 NFE2L2Q16236 605 aa15.8■□□□□ 0.12
PPP4R1-202ENST00000400555 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
PPP4R1-202ENST00000400555 GNAI1P63096 354 aa15.8■□□□□ 0.12
PPP4R1-202ENST00000400555 RNF17Q9BXT8 1623 aaKnown RBP15.8■□□□□ 0.12
PPP4R1-202ENST00000400555 C16orf71Q8IYS4 520 aaPredicted RBP15.8■□□□□ 0.12
PPP4R1-202ENST00000400555 AAMPQ13685 434 aa15.79■□□□□ 0.12
PPP4R1-202ENST00000400555 L1TD1Q5T7N2 865 aaKnown RBP15.79■□□□□ 0.12
PPP4R1-202ENST00000400555 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
PPP4R1-202ENST00000400555 NAP1L5Q96NT1 182 aaPredicted RBP15.79■□□□□ 0.12
PPP4R1-202ENST00000400555 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
PPP4R1-202ENST00000400555 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
PPP4R1-202ENST00000400555 SBNO2Q9Y2G9 1366 aa15.78■□□□□ 0.12
PPP4R1-202ENST00000400555 MYOM2P54296 1465 aa15.78■□□□□ 0.12
PPP4R1-202ENST00000400555 NUDT16Q96DE0 195 aaKnown RBP15.78■□□□□ 0.12
PPP4R1-202ENST00000400555 KIF1BO60333 1816 aa15.77■□□□□ 0.12
PPP4R1-202ENST00000400555 VAMP4O75379 141 aa15.77■□□□□ 0.12
PPP4R1-202ENST00000400555 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.12
PPP4R1-202ENST00000400555 SLC26A8Q96RN1 970 aa15.77■□□□□ 0.12
PPP4R1-202ENST00000400555 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.11
PPP4R1-202ENST00000400555 ZNF428Q96B54 188 aa15.77■□□□□ 0.11
PPP4R1-202ENST00000400555 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
PPP4R1-202ENST00000400555 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
PPP4R1-202ENST00000400555 EFCAB6Q5THR3 1501 aa15.76■□□□□ 0.11
PPP4R1-202ENST00000400555 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
PPP4R1-202ENST00000400555 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
PPP4R1-202ENST00000400555 SMC5Q8IY18 1101 aa15.76■□□□□ 0.11
PPP4R1-202ENST00000400555 NUCB1Q02818 461 aa15.75■□□□□ 0.11
PPP4R1-202ENST00000400555 CEP152O94986 1710 aa15.75■□□□□ 0.11
PPP4R1-202ENST00000400555 F6X3S4 739 aa15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 TBC1D9Q6ZT07 1266 aa15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 TRIM44Q96DX7 344 aaPredicted RBP15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 TSHZ3Q63HK5 1081 aa15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 ANTXR1Q9H6X2 564 aa15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 PPRC1Q5VV67 1664 aaKnown RBP15.74■□□□□ 0.11
PPP4R1-202ENST00000400555 OTUD7AQ8TE49 926 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 MYOM1P52179 1685 aa15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 MRPL50Q8N5N7 158 aaKnown RBP15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 NSD2O96028 1365 aa15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 ZBTB7BO15156 539 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-202ENST00000400555 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 YTHDC2Q9H6S0 1430 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 XRCC6P12956 609 aaKnown RBP eCLIP15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 API5Q9BZZ5 524 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 GBP4Q96PP9 640 aa15.72■□□□□ 0.11
PPP4R1-202ENST00000400555 TNPO1Q92973 898 aaKnown RBP15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 GOLGA6L22H0YM25 854 aa15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 FOXO3O43524 673 aa15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 CD2BP2O95400 341 aaKnown RBP15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 AMPHP49418 695 aa15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 ALDH1L2Q3SY69 923 aa15.71■□□□□ 0.11
PPP4R1-202ENST00000400555 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
PPP4R1-202ENST00000400555 DDX49Q9Y6V7 483 aaKnown RBP15.7■□□□□ 0.1
PPP4R1-202ENST00000400555 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
PPP4R1-202ENST00000400555 TRIM6-TRIM34B2RNG4 842 aa15.7■□□□□ 0.1
PPP4R1-202ENST00000400555 SSFA2P28290 1259 aa15.69■□□□□ 0.1
PPP4R1-202ENST00000400555 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
PPP4R1-202ENST00000400555 RILPL2Q969X0 211 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms