RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
CSNK2A1-203ENST00000400217 NCOA3Q9Y6Q9 1424 aa22.8■■□□□ 1.24
CSNK2A1-203ENST00000400217 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
CSNK2A1-203ENST00000400217 COG3Q96JB2 828 aa22.79■■□□□ 1.24
CSNK2A1-203ENST00000400217 SSH2Q76I76 1423 aa22.79■■□□□ 1.24
CSNK2A1-203ENST00000400217 NRKQ7Z2Y5 1582 aa22.79■■□□□ 1.24
CSNK2A1-203ENST00000400217 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
CSNK2A1-203ENST00000400217 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
CSNK2A1-203ENST00000400217 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
CSNK2A1-203ENST00000400217 ZRANB1Q9UGI0 708 aa22.78■■□□□ 1.24
CSNK2A1-203ENST00000400217 TTC21AQ8NDW8 1320 aa22.77■■□□□ 1.24
CSNK2A1-203ENST00000400217 TMEM94Q12767 1356 aa22.77■■□□□ 1.24
CSNK2A1-203ENST00000400217 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
CSNK2A1-203ENST00000400217 AATKQ6ZMQ8 1374 aa22.72■■□□□ 1.23
CSNK2A1-203ENST00000400217 POLKQ9UBT6 870 aa22.72■■□□□ 1.23
CSNK2A1-203ENST00000400217 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
CSNK2A1-203ENST00000400217 ATF3P18847 181 aa22.71■■□□□ 1.23
CSNK2A1-203ENST00000400217 DCCP43146 1447 aa22.71■■□□□ 1.23
CSNK2A1-203ENST00000400217 SHPRHQ149N8 1683 aa22.71■■□□□ 1.23
CSNK2A1-203ENST00000400217 OVOS2A0A0J9YW53 1432 aa22.7■■□□□ 1.22
CSNK2A1-203ENST00000400217 OVOS2Q6IE36 1432 aa22.7■■□□□ 1.22
CSNK2A1-203ENST00000400217 PNPLA6Q8IY17 1366 aa22.69■■□□□ 1.22
CSNK2A1-203ENST00000400217 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
CSNK2A1-203ENST00000400217 FBLN1P23142 703 aa22.69■■□□□ 1.22
CSNK2A1-203ENST00000400217 USP31Q70CQ4 1352 aa22.68■■□□□ 1.22
CSNK2A1-203ENST00000400217 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
CSNK2A1-203ENST00000400217 ORAI2Q96SN7 254 aa22.68■■□□□ 1.22
CSNK2A1-203ENST00000400217 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
CSNK2A1-203ENST00000400217 ZNF335Q9H4Z2 1342 aaPredicted RBP22.67■■□□□ 1.22
CSNK2A1-203ENST00000400217 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
CSNK2A1-203ENST00000400217 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
CSNK2A1-203ENST00000400217 PSME1Q06323 249 aa22.66■■□□□ 1.22
CSNK2A1-203ENST00000400217 CADPS2Q86UW7 1296 aa22.66■■□□□ 1.22
CSNK2A1-203ENST00000400217 MSH6P52701 1360 aa22.66■■□□□ 1.22
CSNK2A1-203ENST00000400217 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
CSNK2A1-203ENST00000400217 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
CSNK2A1-203ENST00000400217 DIAPH1O60610 1272 aaKnown RBP22.65■■□□□ 1.22
CSNK2A1-203ENST00000400217 CCDC146Q8IYE0 955 aa22.65■■□□□ 1.22
CSNK2A1-203ENST00000400217 EMILIN1Q9Y6C2 1016 aa22.65■■□□□ 1.22
CSNK2A1-203ENST00000400217 LRRC7Q96NW7 1537 aa22.64■■□□□ 1.22
CSNK2A1-203ENST00000400217 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.21
CSNK2A1-203ENST00000400217 SALL2Q9Y467 1007 aaPredicted RBP22.64■■□□□ 1.21
CSNK2A1-203ENST00000400217 MST1RQ04912 1400 aa22.64■■□□□ 1.21
CSNK2A1-203ENST00000400217 NLRP6P59044 892 aa22.63■■□□□ 1.21
CSNK2A1-203ENST00000400217 RRS1Q15050 365 aaKnown RBP22.63■■□□□ 1.21
CSNK2A1-203ENST00000400217 PIK3C2AO00443 1686 aa22.63■■□□□ 1.21
CSNK2A1-203ENST00000400217 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
CSNK2A1-203ENST00000400217 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
CSNK2A1-203ENST00000400217 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.216e-7■■□□□ 12.8
CSNK2A1-203ENST00000400217 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
CSNK2A1-203ENST00000400217 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
CSNK2A1-203ENST00000400217 FOXO3O43524 673 aa22.61■■□□□ 1.21
CSNK2A1-203ENST00000400217 CDK12Q9NYV4 1490 aaPredicted RBP22.61■■□□□ 1.21
CSNK2A1-203ENST00000400217 KIF1AQ12756 1690 aa22.61■■□□□ 1.21
CSNK2A1-203ENST00000400217 PDE3BQ13370 1112 aa22.6■■□□□ 1.21
CSNK2A1-203ENST00000400217 APAF1O14727 1248 aa22.6■■□□□ 1.21
CSNK2A1-203ENST00000400217 U2SURPO15042 1029 aaKnown RBP22.6■■□□□ 1.21
CSNK2A1-203ENST00000400217 RUNDC1Q96C34 613 aa22.6■■□□□ 1.21
CSNK2A1-203ENST00000400217 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
CSNK2A1-203ENST00000400217 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
CSNK2A1-203ENST00000400217 NUTM2GQ5VZR2 741 aa22.57■■□□□ 1.2
CSNK2A1-203ENST00000400217 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
CSNK2A1-203ENST00000400217 SOX12O15370 315 aa22.55■■□□□ 1.2
CSNK2A1-203ENST00000400217 IL13P35225 146 aa22.55■■□□□ 1.2
CSNK2A1-203ENST00000400217 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
CSNK2A1-203ENST00000400217 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
CSNK2A1-203ENST00000400217 PNNQ9H307 717 aaKnown RBP22.54■■□□□ 1.2
CSNK2A1-203ENST00000400217 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
CSNK2A1-203ENST00000400217 FCHSD2O94868 740 aa22.52■■□□□ 1.2
CSNK2A1-203ENST00000400217 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
CSNK2A1-203ENST00000400217 ZNF521Q96K83 1311 aa22.52■■□□□ 1.2
CSNK2A1-203ENST00000400217 PLEKHF1Q96S99 279 aa22.51■■□□□ 1.19
CSNK2A1-203ENST00000400217 TRPM3Q9HCF6 1732 aaPredicted RBP22.5■■□□□ 1.19
CSNK2A1-203ENST00000400217 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
CSNK2A1-203ENST00000400217 PEAK1Q9H792 1746 aa22.5■■□□□ 1.19
CSNK2A1-203ENST00000400217 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
CSNK2A1-203ENST00000400217 SLAIN2Q9P270 581 aa22.49■■□□□ 1.19
CSNK2A1-203ENST00000400217 NPHP3Q7Z494 1330 aa22.49■■□□□ 1.19
CSNK2A1-203ENST00000400217 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
CSNK2A1-203ENST00000400217 FLT4P35916 1363 aa22.48■■□□□ 1.19
CSNK2A1-203ENST00000400217 KIF24Q5T7B8 1368 aa22.48■■□□□ 1.19
CSNK2A1-203ENST00000400217 AMPHP49418 695 aa22.48■■□□□ 1.19
CSNK2A1-203ENST00000400217 HSP90AB2PQ58FF8 381 aa22.48■■□□□ 1.19
CSNK2A1-203ENST00000400217 KCNH5Q8NCM2 988 aa22.48■■□□□ 1.19
CSNK2A1-203ENST00000400217 CDCA7LQ96GN5 454 aa22.48■■□□□ 1.19
CSNK2A1-203ENST00000400217 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
CSNK2A1-203ENST00000400217 GOLGA2Q08379 1002 aa22.47■■□□□ 1.19
CSNK2A1-203ENST00000400217 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
CSNK2A1-203ENST00000400217 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
CSNK2A1-203ENST00000400217 RSPH6AQ9H0K4 717 aa22.47■■□□□ 1.19
CSNK2A1-203ENST00000400217 SUPT16HQ9Y5B9 1047 aaKnown RBP22.47■■□□□ 1.19
CSNK2A1-203ENST00000400217 MAPK8IP3Q9UPT6 1336 aa22.46■■□□□ 1.19
CSNK2A1-203ENST00000400217 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
CSNK2A1-203ENST00000400217 RRP7AQ9Y3A4 280 aaKnown RBP22.45■■□□□ 1.18
CSNK2A1-203ENST00000400217 HMOX1P09601 288 aa22.44■■□□□ 1.18
CSNK2A1-203ENST00000400217 NEUROD2Q15784 382 aa22.44■■□□□ 1.18
CSNK2A1-203ENST00000400217 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
CSNK2A1-203ENST00000400217 WWC1Q8IX03 1113 aa22.44■■□□□ 1.18
CSNK2A1-203ENST00000400217 NEFMP07197 916 aa22.43■■□□□ 1.18
CSNK2A1-203ENST00000400217 PRKAR2BP31323 418 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms