RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
RUNX3-203ENST00000399916 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.27
RUNX3-203ENST00000399916 GAS2L3Q86XJ1 694 aa16.71■□□□□ 0.27
RUNX3-203ENST00000399916 POLR3GO15318 223 aaPredicted RBP16.71■□□□□ 0.26
RUNX3-203ENST00000399916 C17orf53Q8N3J3 647 aaPredicted RBP16.71■□□□□ 0.26
RUNX3-203ENST00000399916 ZKSCAN5Q9Y2L8 839 aa16.71■□□□□ 0.26
RUNX3-203ENST00000399916 KDM5CP41229 1560 aa16.71■□□□□ 0.26
RUNX3-203ENST00000399916 TTC12Q9H892 705 aaPredicted RBP16.7■□□□□ 0.26
RUNX3-203ENST00000399916 CCDC112Q8NEF3 446 aa16.7■□□□□ 0.26
RUNX3-203ENST00000399916 RTF1Q92541 710 aaKnown RBP16.7■□□□□ 0.26
RUNX3-203ENST00000399916 USP25Q9UHP3 1055 aa16.7■□□□□ 0.26
RUNX3-203ENST00000399916 RIPK4P57078 832 aa16.69■□□□□ 0.26
RUNX3-203ENST00000399916 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
RUNX3-203ENST00000399916 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
RUNX3-203ENST00000399916 KIF16BQ96L93 1317 aa16.69■□□□□ 0.26
RUNX3-203ENST00000399916 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
RUNX3-203ENST00000399916 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
RUNX3-203ENST00000399916 ASXL2Q76L83 1435 aa16.69■□□□□ 0.26
RUNX3-203ENST00000399916 KIF3BO15066 747 aa16.69■□□□□ 0.26
RUNX3-203ENST00000399916 KIF14Q15058 1648 aa16.68■□□□□ 0.26
RUNX3-203ENST00000399916 GTF2A1P52655 376 aaPredicted RBP16.68■□□□□ 0.26
RUNX3-203ENST00000399916 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
RUNX3-203ENST00000399916 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
RUNX3-203ENST00000399916 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
RUNX3-203ENST00000399916 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
RUNX3-203ENST00000399916 FBXW7Q969H0 707 aa16.67■□□□□ 0.26
RUNX3-203ENST00000399916 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.67■□□□□ 0.26
RUNX3-203ENST00000399916 V9GYY5 206 aaPredicted RBP16.67■□□□□ 0.26
RUNX3-203ENST00000399916 C16orf45Q96MC5 204 aaPredicted RBP16.67■□□□□ 0.26
RUNX3-203ENST00000399916 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 CD109Q6YHK3 1445 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 PRIM1P49642 420 aaKnown RBP16.66■□□□□ 0.26
RUNX3-203ENST00000399916 PDE3AQ14432 1141 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
RUNX3-203ENST00000399916 PRDM4Q9UKN5 801 aa16.66■□□□□ 0.26
RUNX3-203ENST00000399916 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
RUNX3-203ENST00000399916 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
RUNX3-203ENST00000399916 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.26
RUNX3-203ENST00000399916 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
RUNX3-203ENST00000399916 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
RUNX3-203ENST00000399916 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
RUNX3-203ENST00000399916 K7ELQ4 463 aaPredicted RBP16.64■□□□□ 0.25
RUNX3-203ENST00000399916 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
RUNX3-203ENST00000399916 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
RUNX3-203ENST00000399916 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
RUNX3-203ENST00000399916 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
RUNX3-203ENST00000399916 C10orf67Q8IYJ2 551 aa16.63■□□□□ 0.25
RUNX3-203ENST00000399916 TRIM5Q9C035 493 aa16.63■□□□□ 0.25
RUNX3-203ENST00000399916 MCCP23508 829 aa16.62■□□□□ 0.25
RUNX3-203ENST00000399916 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
RUNX3-203ENST00000399916 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
RUNX3-203ENST00000399916 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
RUNX3-203ENST00000399916 EIF3AQ14152 1382 aaKnown RBP16.62■□□□□ 0.25
RUNX3-203ENST00000399916 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
RUNX3-203ENST00000399916 CWC15Q9P013 229 aaKnown RBP16.62■□□□□ 0.25
RUNX3-203ENST00000399916 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
RUNX3-203ENST00000399916 CCDC27Q2M243 656 aa16.61■□□□□ 0.25
RUNX3-203ENST00000399916 PCDHB15Q9Y5E8 787 aa16.61■□□□□ 0.25
RUNX3-203ENST00000399916 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
RUNX3-203ENST00000399916 GDPD2Q9HCC8 539 aa16.61■□□□□ 0.25
RUNX3-203ENST00000399916 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
RUNX3-203ENST00000399916 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
RUNX3-203ENST00000399916 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
RUNX3-203ENST00000399916 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
RUNX3-203ENST00000399916 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
RUNX3-203ENST00000399916 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
RUNX3-203ENST00000399916 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
RUNX3-203ENST00000399916 GOLGA6L19H0YKK7 550 aa16.6■□□□□ 0.25
RUNX3-203ENST00000399916 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
RUNX3-203ENST00000399916 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 NOL7Q9UMY1 257 aaKnown RBP16.59■□□□□ 0.25
RUNX3-203ENST00000399916 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 BECN2A8MW95 431 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
RUNX3-203ENST00000399916 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.25
RUNX3-203ENST00000399916 FIBPO43427 364 aa16.58■□□□□ 0.24
RUNX3-203ENST00000399916 MBD3O95983 291 aa16.58■□□□□ 0.24
RUNX3-203ENST00000399916 KLHL40Q2TBA0 621 aa16.58■□□□□ 0.24
RUNX3-203ENST00000399916 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
RUNX3-203ENST00000399916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.58■□□□□ 0.24
RUNX3-203ENST00000399916 KANK1Q14678 1352 aa16.57■□□□□ 0.24
RUNX3-203ENST00000399916 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
RUNX3-203ENST00000399916 RLBP1P12271 317 aa16.57■□□□□ 0.24
RUNX3-203ENST00000399916 ZMYM4Q5VZL5 1548 aa16.57■□□□□ 0.24
RUNX3-203ENST00000399916 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
RUNX3-203ENST00000399916 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
RUNX3-203ENST00000399916 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
RUNX3-203ENST00000399916 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
RUNX3-203ENST00000399916 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
RUNX3-203ENST00000399916 ARGLU1Q9NWB6 273 aaPredicted RBP16.56■□□□□ 0.24
RUNX3-203ENST00000399916 MTHFSP49914 203 aa16.56■□□□□ 0.24
RUNX3-203ENST00000399916 UTP14CQ5TAP6 766 aaKnown RBP16.56■□□□□ 0.24
RUNX3-203ENST00000399916 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms