RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 MLECQ14165 292 aa17.64■□□□□ 0.41
PTPN6-202ENST00000399448 PNPLA6Q8IY17 1366 aa17.64■□□□□ 0.41
PTPN6-202ENST00000399448 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
PTPN6-202ENST00000399448 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
PTPN6-202ENST00000399448 RGS3P49796 1198 aa17.63■□□□□ 0.41
PTPN6-202ENST00000399448 C8orf34Q49A92 452 aa17.63■□□□□ 0.41
PTPN6-202ENST00000399448 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
PTPN6-202ENST00000399448 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPN6-202ENST00000399448 NBR1Q14596 966 aa17.62■□□□□ 0.41
PTPN6-202ENST00000399448 ATP7BP35670 1465 aa17.62■□□□□ 0.41
PTPN6-202ENST00000399448 SETD1AO15047 1707 aaKnown RBP17.62■□□□□ 0.41
PTPN6-202ENST00000399448 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
PTPN6-202ENST00000399448 IL16Q14005 1332 aa17.61■□□□□ 0.41
PTPN6-202ENST00000399448 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
PTPN6-202ENST00000399448 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
PTPN6-202ENST00000399448 RLBP1P12271 317 aa17.6■□□□□ 0.41
PTPN6-202ENST00000399448 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
PTPN6-202ENST00000399448 ESF1Q9H501 851 aaKnown RBP17.59■□□□□ 0.41
PTPN6-202ENST00000399448 ZMYM3Q14202 1370 aa17.58■□□□□ 0.41
PTPN6-202ENST00000399448 HDGFP51858 240 aaKnown RBP17.58■□□□□ 0.4
PTPN6-202ENST00000399448 WASLO00401 505 aaPredicted RBP17.57■□□□□ 0.4
PTPN6-202ENST00000399448 FCHSD2O94868 740 aa17.57■□□□□ 0.4
PTPN6-202ENST00000399448 RIPK4P57078 832 aa17.57■□□□□ 0.4
PTPN6-202ENST00000399448 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
PTPN6-202ENST00000399448 SIRT1Q96EB6 747 aa17.57■□□□□ 0.4
PTPN6-202ENST00000399448 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
PTPN6-202ENST00000399448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPN6-202ENST00000399448 TSR2Q969E8 191 aaKnown RBP17.57■□□□□ 0.4
PTPN6-202ENST00000399448 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
PTPN6-202ENST00000399448 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
PTPN6-202ENST00000399448 NRXN3Q9Y4C0 1643 aa17.56■□□□□ 0.4
PTPN6-202ENST00000399448 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
PTPN6-202ENST00000399448 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
PTPN6-202ENST00000399448 METP08581 1390 aa17.55■□□□□ 0.4
PTPN6-202ENST00000399448 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
PTPN6-202ENST00000399448 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
PTPN6-202ENST00000399448 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
PTPN6-202ENST00000399448 DZIP1LQ8IYY4 767 aaKnown RBP17.54■□□□□ 0.4
PTPN6-202ENST00000399448 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
PTPN6-202ENST00000399448 FAM135BQ49AJ0 1406 aa17.53■□□□□ 0.4
PTPN6-202ENST00000399448 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
PTPN6-202ENST00000399448 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
PTPN6-202ENST00000399448 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
PTPN6-202ENST00000399448 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.4
PTPN6-202ENST00000399448 NEFMP07197 916 aa17.52■□□□□ 0.4
PTPN6-202ENST00000399448 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
PTPN6-202ENST00000399448 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
PTPN6-202ENST00000399448 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
PTPN6-202ENST00000399448 SSH1Q8WYL5 1049 aa17.52■□□□□ 0.39
PTPN6-202ENST00000399448 TECPR2O15040 1411 aa17.51■□□□□ 0.39
PTPN6-202ENST00000399448 DEKP35659 375 aaKnown RBP17.51■□□□□ 0.39
PTPN6-202ENST00000399448 NUDT16Q96DE0 195 aaKnown RBP17.51■□□□□ 0.39
PTPN6-202ENST00000399448 TNRQ92752 1358 aa17.51■□□□□ 0.39
PTPN6-202ENST00000399448 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
PTPN6-202ENST00000399448 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
PTPN6-202ENST00000399448 KNDC1Q76NI1 1749 aa17.5■□□□□ 0.39
PTPN6-202ENST00000399448 FBLN1P23142 703 aa17.5■□□□□ 0.39
PTPN6-202ENST00000399448 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
PTPN6-202ENST00000399448 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
PTPN6-202ENST00000399448 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
PTPN6-202ENST00000399448 AATKQ6ZMQ8 1374 aa17.49■□□□□ 0.39
PTPN6-202ENST00000399448 LRRC7Q96NW7 1537 aa17.49■□□□□ 0.39
PTPN6-202ENST00000399448 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
PTPN6-202ENST00000399448 TRIM27P14373 513 aa17.48■□□□□ 0.39
PTPN6-202ENST00000399448 ATF7IPQ6VMQ6 1270 aa17.48■□□□□ 0.39
PTPN6-202ENST00000399448 NME9Q86XW9 330 aa17.48■□□□□ 0.39
PTPN6-202ENST00000399448 MAP2P11137 1827 aaKnown RBP17.48■□□□□ 0.39
PTPN6-202ENST00000399448 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
PTPN6-202ENST00000399448 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
PTPN6-202ENST00000399448 TMEM2Q9UHN6 1383 aa17.47■□□□□ 0.39
PTPN6-202ENST00000399448 IPO8O15397 1037 aaKnown RBP17.47■□□□□ 0.39
PTPN6-202ENST00000399448 IL13P35225 146 aa17.47■□□□□ 0.39
PTPN6-202ENST00000399448 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
PTPN6-202ENST00000399448 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
PTPN6-202ENST00000399448 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
PTPN6-202ENST00000399448 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
PTPN6-202ENST00000399448 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
PTPN6-202ENST00000399448 CPS1P31327 1500 aa17.46■□□□□ 0.39
PTPN6-202ENST00000399448 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
PTPN6-202ENST00000399448 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
PTPN6-202ENST00000399448 COG3Q96JB2 828 aa17.46■□□□□ 0.39
PTPN6-202ENST00000399448 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
PTPN6-202ENST00000399448 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
PTPN6-202ENST00000399448 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
PTPN6-202ENST00000399448 PHACTR3Q96KR7 559 aa17.45■□□□□ 0.38
PTPN6-202ENST00000399448 ZRANB1Q9UGI0 708 aa17.45■□□□□ 0.38
PTPN6-202ENST00000399448 HMOX1P09601 288 aa17.44■□□□□ 0.38
PTPN6-202ENST00000399448 HDAC1Q13547 482 aaPredicted RBP17.44■□□□□ 0.38
PTPN6-202ENST00000399448 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
PTPN6-202ENST00000399448 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
PTPN6-202ENST00000399448 USP19O94966 1318 aa17.43■□□□□ 0.38
PTPN6-202ENST00000399448 NCKAP5LQ9HCH0 1330 aa17.43■□□□□ 0.38
PTPN6-202ENST00000399448 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
PTPN6-202ENST00000399448 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
PTPN6-202ENST00000399448 UBR1Q8IWV7 1749 aa17.43■□□□□ 0.38
PTPN6-202ENST00000399448 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
PTPN6-202ENST00000399448 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
PTPN6-202ENST00000399448 ADAMTS13Q76LX8 1427 aa17.41■□□□□ 0.38
PTPN6-202ENST00000399448 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
PTPN6-202ENST00000399448 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms