RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 NGDNQ8NEJ9 315 aaKnown RBP22.11■■□□□ 1.13
TNRC18-202ENST00000399434 TTC21BQ7Z4L5 1316 aa22.11■■□□□ 1.13
TNRC18-202ENST00000399434 IQSEC2Q5JU85 1478 aa22.1■■□□□ 1.13
TNRC18-202ENST00000399434 NHSL1Q5SYE7 1610 aa22.1■■□□□ 1.13
TNRC18-202ENST00000399434 CCDC184Q52MB2 194 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.09■■□□□ 1.136e-8■□□□□ 11
TNRC18-202ENST00000399434 OVOS2A0A0J9YW53 1432 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 OVOS2Q6IE36 1432 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 CCER2I3L3R5 266 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 NME9Q86XW9 330 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 GGNBP2Q9H3C7 697 aa22.09■■□□□ 1.13
TNRC18-202ENST00000399434 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.13
TNRC18-202ENST00000399434 PXDNQ92626 1479 aa22.07■■□□□ 1.12
TNRC18-202ENST00000399434 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
TNRC18-202ENST00000399434 ROBO1Q9Y6N7 1651 aa22.06■■□□□ 1.12
TNRC18-202ENST00000399434 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
TNRC18-202ENST00000399434 BRD4O60885 1362 aaPredicted RBP22.05■■□□□ 1.12
TNRC18-202ENST00000399434 TTC21AQ8NDW8 1320 aa22.04■■□□□ 1.12
TNRC18-202ENST00000399434 SLAIN2Q9P270 581 aa22.04■■□□□ 1.12
TNRC18-202ENST00000399434 FOXO3O43524 673 aa22.03■■□□□ 1.12
TNRC18-202ENST00000399434 PPP2R1AP30153 589 aa22.03■■□□□ 1.12
TNRC18-202ENST00000399434 MORC1Q86VD1 984 aa22.03■■□□□ 1.12
TNRC18-202ENST00000399434 USP31Q70CQ4 1352 aa22.02■■□□□ 1.12
TNRC18-202ENST00000399434 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
TNRC18-202ENST00000399434 XPCQ01831 940 aaPredicted RBP22.01■■□□□ 1.11
TNRC18-202ENST00000399434 CERKQ8TCT0 537 aa22.01■■□□□ 1.11
TNRC18-202ENST00000399434 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
TNRC18-202ENST00000399434 MAP2P11137 1827 aaKnown RBP22.01■■□□□ 1.11
TNRC18-202ENST00000399434 NLRP13Q86W25 1043 aa22■■□□□ 1.11
TNRC18-202ENST00000399434 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
TNRC18-202ENST00000399434 PSME1Q06323 249 aa21.98■■□□□ 1.11
TNRC18-202ENST00000399434 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
TNRC18-202ENST00000399434 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
TNRC18-202ENST00000399434 NPHP3Q7Z494 1330 aa21.97■■□□□ 1.11
TNRC18-202ENST00000399434 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
TNRC18-202ENST00000399434 PEAK1Q9H792 1746 aa21.97■■□□□ 1.11
TNRC18-202ENST00000399434 SMG6Q86US8 1419 aaKnown RBP21.97■■□□□ 1.11
TNRC18-202ENST00000399434 KRT28Q7Z3Y7 464 aa21.96■■□□□ 1.11
TNRC18-202ENST00000399434 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
TNRC18-202ENST00000399434 SLIT3O75094 1523 aa21.96■■□□□ 1.11
TNRC18-202ENST00000399434 SBNO1A3KN83 1393 aa21.95■■□□□ 1.11
TNRC18-202ENST00000399434 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.11
TNRC18-202ENST00000399434 MED1Q15648 1581 aaPredicted RBP21.95■■□□□ 1.1
TNRC18-202ENST00000399434 TNS3Q68CZ2 1445 aa21.95■■□□□ 1.1
TNRC18-202ENST00000399434 NFAT5O94916 1531 aa21.95■■□□□ 1.1
TNRC18-202ENST00000399434 COG3Q96JB2 828 aa21.95■■□□□ 1.1
TNRC18-202ENST00000399434 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
TNRC18-202ENST00000399434 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
TNRC18-202ENST00000399434 LTN1O94822 1766 aa21.93■■□□□ 1.1
TNRC18-202ENST00000399434 AATKQ6ZMQ8 1374 aa21.93■■□□□ 1.1
TNRC18-202ENST00000399434 PAK3O75914 559 aaPredicted RBP21.93■■□□□ 1.1
TNRC18-202ENST00000399434 FBLN1P23142 703 aa21.93■■□□□ 1.1
TNRC18-202ENST00000399434 SOS2Q07890 1332 aaPredicted RBP21.93■■□□□ 1.1
TNRC18-202ENST00000399434 NUTM2GQ5VZR2 741 aa21.92■■□□□ 1.1
TNRC18-202ENST00000399434 ABTB2Q8N961 1025 aa21.9■■□□□ 1.1
TNRC18-202ENST00000399434 COL16A1Q07092 1604 aaPredicted RBP21.9■■□□□ 1.1
TNRC18-202ENST00000399434 CDK12Q9NYV4 1490 aaPredicted RBP21.89■■□□□ 1.1
TNRC18-202ENST00000399434 USP19O94966 1318 aa21.89■■□□□ 1.1
TNRC18-202ENST00000399434 PHLPP1O60346 1717 aa21.89■■□□□ 1.09
TNRC18-202ENST00000399434 NLRP6P59044 892 aa21.89■■□□□ 1.09
TNRC18-202ENST00000399434 SPATA31A3Q5VYP0 1347 aa21.88■■□□□ 1.09
TNRC18-202ENST00000399434 MTHFSP49914 203 aa21.88■■□□□ 1.09
TNRC18-202ENST00000399434 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
TNRC18-202ENST00000399434 PNISRQ8TF01 805 aaKnown RBP21.87■■□□□ 1.09
TNRC18-202ENST00000399434 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
TNRC18-202ENST00000399434 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
TNRC18-202ENST00000399434 RRS1Q15050 365 aaKnown RBP21.84■■□□□ 1.09
TNRC18-202ENST00000399434 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
TNRC18-202ENST00000399434 INSRP06213 1382 aa21.83■■□□□ 1.09
TNRC18-202ENST00000399434 ARHGEF10O15013 1369 aa21.83■■□□□ 1.08
TNRC18-202ENST00000399434 MAP3K19Q56UN5 1328 aa21.82■■□□□ 1.08
TNRC18-202ENST00000399434 UBAP1LF5GYI3 381 aa21.82■■□□□ 1.08
TNRC18-202ENST00000399434 SOX12O15370 315 aa21.82■■□□□ 1.08
TNRC18-202ENST00000399434 TOM1O60784 492 aa21.82■■□□□ 1.08
TNRC18-202ENST00000399434 LMOD2Q6P5Q4 547 aa21.81■■□□□ 1.08
TNRC18-202ENST00000399434 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
TNRC18-202ENST00000399434 COL18A1P39060 1754 aa21.79■■□□□ 1.08
TNRC18-202ENST00000399434 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
TNRC18-202ENST00000399434 BLMP54132 1417 aaPredicted RBP21.78■■□□□ 1.08
TNRC18-202ENST00000399434 RGPD5Q99666 1765 aa21.78■■□□□ 1.08
TNRC18-202ENST00000399434 PIP4K2BP78356 416 aa21.77■■□□□ 1.08
TNRC18-202ENST00000399434 FLT4P35916 1363 aa21.76■■□□□ 1.07
TNRC18-202ENST00000399434 GCP02774 474 aa21.76■■□□□ 1.07
TNRC18-202ENST00000399434 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
TNRC18-202ENST00000399434 RTL1A6NKG5 1358 aa21.75■■□□□ 1.07
TNRC18-202ENST00000399434 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
TNRC18-202ENST00000399434 PLEKHG5O94827 1062 aa21.75■■□□□ 1.07
TNRC18-202ENST00000399434 CABLES1Q8TDN4 633 aa21.75■■□□□ 1.07
TNRC18-202ENST00000399434 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
TNRC18-202ENST00000399434 KIF24Q5T7B8 1368 aa21.75■■□□□ 1.07
TNRC18-202ENST00000399434 KCNH5Q8NCM2 988 aa21.74■■□□□ 1.07
TNRC18-202ENST00000399434 ABCC6O95255 1503 aa21.72■■□□□ 1.07
TNRC18-202ENST00000399434 ADAMTS8Q9UP79 889 aa21.72■■□□□ 1.07
TNRC18-202ENST00000399434 LMO7Q8WWI1 1683 aa21.72■■□□□ 1.07
TNRC18-202ENST00000399434 RGPD2P0DJD1 1756 aa21.72■■□□□ 1.07
TNRC18-202ENST00000399434 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
TNRC18-202ENST00000399434 ARHGEF25Q86VW2 580 aa21.71■■□□□ 1.07
TNRC18-202ENST00000399434 HOXC9P31274 260 aa21.71■■□□□ 1.07
TNRC18-202ENST00000399434 DIAPH1O60610 1272 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms