RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 VGFO15240 615 aaPredicted RBP14.04□□□□□ -0.16
MSL3-207ENST00000398527 RGS3P49796 1198 aa14.04□□□□□ -0.16
MSL3-207ENST00000398527 HNRNPUQ00839 825 aaKnown RBP eCLIP14.04□□□□□ -0.16
MSL3-207ENST00000398527 SLC26A8Q96RN1 970 aa14.04□□□□□ -0.16
MSL3-207ENST00000398527 IQGAP3Q86VI3 1631 aa14.04□□□□□ -0.16
MSL3-207ENST00000398527 DIP2AQ14689 1571 aa14.04□□□□□ -0.16
MSL3-207ENST00000398527 DNAJC2Q99543 621 aaKnown RBP14.04□□□□□ -0.16
MSL3-207ENST00000398527 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
MSL3-207ENST00000398527 ERBINQ96RT1 1412 aa14.04□□□□□ -0.16
MSL3-207ENST00000398527 GPATCH11Q8N954 259 aa14.03□□□□□ -0.16
MSL3-207ENST00000398527 EFCAB6Q5THR3 1501 aa14.03□□□□□ -0.16
MSL3-207ENST00000398527 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
MSL3-207ENST00000398527 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
MSL3-207ENST00000398527 RBM6P78332 1123 aaKnown RBP14.03□□□□□ -0.16
MSL3-207ENST00000398527 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
MSL3-207ENST00000398527 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
MSL3-207ENST00000398527 E9PCH4 1651 aa14.03□□□□□ -0.16
MSL3-207ENST00000398527 ATAD2Q6PL18 1390 aa14.02□□□□□ -0.16
MSL3-207ENST00000398527 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
MSL3-207ENST00000398527 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■■□□ 18.8
MSL3-207ENST00000398527 NCOA3Q9Y6Q9 1424 aa14□□□□□ -0.17
MSL3-207ENST00000398527 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
MSL3-207ENST00000398527 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
MSL3-207ENST00000398527 MAFGO15525 162 aa13.99□□□□□ -0.17
MSL3-207ENST00000398527 QTRT2Q9H974 415 aaKnown RBP13.99□□□□□ -0.17
MSL3-207ENST00000398527 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
MSL3-207ENST00000398527 GPRASP1Q5JY77 1395 aa13.99□□□□□ -0.17
MSL3-207ENST00000398527 CHD2O14647 1828 aaKnown RBP13.99□□□□□ -0.17
MSL3-207ENST00000398527 PHF14O94880 888 aa13.98□□□□□ -0.17
MSL3-207ENST00000398527 CCDC27Q2M243 656 aa13.98□□□□□ -0.17
MSL3-207ENST00000398527 MMP14P50281 582 aa13.98□□□□□ -0.17
MSL3-207ENST00000398527 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
MSL3-207ENST00000398527 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.96□□□□□ -0.17
MSL3-207ENST00000398527 SMG6Q86US8 1419 aaKnown RBP13.95□□□□□ -0.18
MSL3-207ENST00000398527 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
MSL3-207ENST00000398527 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
MSL3-207ENST00000398527 CCDC144AA2RUR9 1427 aa13.94□□□□□ -0.18
MSL3-207ENST00000398527 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
MSL3-207ENST00000398527 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
MSL3-207ENST00000398527 NGLY1Q96IV0 654 aa13.94□□□□□ -0.18
MSL3-207ENST00000398527 HDAC5Q9UQL6 1122 aa13.94□□□□□ -0.18
MSL3-207ENST00000398527 INSRP06213 1382 aa13.94□□□□□ -0.18
MSL3-207ENST00000398527 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
MSL3-207ENST00000398527 LRP5O75197 1615 aa13.93□□□□□ -0.18
MSL3-207ENST00000398527 SOX12O15370 315 aa13.93□□□□□ -0.18
MSL3-207ENST00000398527 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
MSL3-207ENST00000398527 IDI1Q13907 227 aa13.93□□□□□ -0.18
MSL3-207ENST00000398527 CENPJQ9HC77 1338 aaPredicted RBP13.93□□□□□ -0.18
MSL3-207ENST00000398527 ZBTB22O15209 634 aa13.92□□□□□ -0.18
MSL3-207ENST00000398527 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
MSL3-207ENST00000398527 ATF3P18847 181 aa13.92□□□□□ -0.18
MSL3-207ENST00000398527 SLC52A1Q9NWF4 448 aa13.92□□□□□ -0.18
MSL3-207ENST00000398527 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
MSL3-207ENST00000398527 BRD4O60885 1362 aaPredicted RBP13.92□□□□□ -0.18
MSL3-207ENST00000398527 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
MSL3-207ENST00000398527 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
MSL3-207ENST00000398527 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
MSL3-207ENST00000398527 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
MSL3-207ENST00000398527 RALBP1Q15311 655 aa13.91□□□□□ -0.18
MSL3-207ENST00000398527 TMEM51Q9NW97 253 aa13.91□□□□□ -0.18
MSL3-207ENST00000398527 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
MSL3-207ENST00000398527 LRPPRCP42704 1394 aaKnown RBP13.9□□□□□ -0.18
MSL3-207ENST00000398527 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.18
MSL3-207ENST00000398527 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
MSL3-207ENST00000398527 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.18
MSL3-207ENST00000398527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
MSL3-207ENST00000398527 KDM4AO75164 1064 aa13.89□□□□□ -0.19
MSL3-207ENST00000398527 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
MSL3-207ENST00000398527 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
MSL3-207ENST00000398527 AXDND1Q5T1B0 1012 aaPredicted RBP13.88□□□□□ -0.19
MSL3-207ENST00000398527 DCAF11Q8TEB1 546 aa13.88□□□□□ -0.19
MSL3-207ENST00000398527 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
MSL3-207ENST00000398527 HSP90AA1P07900 732 aaKnown RBP13.87□□□□□ -0.19
MSL3-207ENST00000398527 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
MSL3-207ENST00000398527 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
MSL3-207ENST00000398527 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
MSL3-207ENST00000398527 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
MSL3-207ENST00000398527 RAD21O60216 631 aa13.86□□□□□ -0.19
MSL3-207ENST00000398527 FAM43AQ8N2R8 423 aa13.86□□□□□ -0.19
MSL3-207ENST00000398527 NOS1P29475 1434 aa13.86□□□□□ -0.19
MSL3-207ENST00000398527 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
MSL3-207ENST00000398527 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
MSL3-207ENST00000398527 DCCP43146 1447 aa13.86□□□□□ -0.19
MSL3-207ENST00000398527 NBR1Q14596 966 aa13.85□□□□□ -0.19
MSL3-207ENST00000398527 EP400Q96L91 3159 aa13.85□□□□□ -0.19
MSL3-207ENST00000398527 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
MSL3-207ENST00000398527 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
MSL3-207ENST00000398527 KANK1Q14678 1352 aa13.85□□□□□ -0.19
MSL3-207ENST00000398527 TRPM2O94759 1503 aa13.85□□□□□ -0.19
MSL3-207ENST00000398527 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
MSL3-207ENST00000398527 PARD3Q8TEW0 1356 aa13.84□□□□□ -0.19
MSL3-207ENST00000398527 TRPC5Q9UL62 973 aaPredicted RBP13.84□□□□□ -0.19
MSL3-207ENST00000398527 ATRNO75882 1429 aa13.84□□□□□ -0.19
MSL3-207ENST00000398527 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
MSL3-207ENST00000398527 APPP05067 770 aa13.84□□□□□ -0.19
MSL3-207ENST00000398527 MTMR7Q9Y216 660 aa13.84□□□□□ -0.19
MSL3-207ENST00000398527 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.2
MSL3-207ENST00000398527 PIK3R4Q99570 1358 aa13.83□□□□□ -0.2
MSL3-207ENST00000398527 C1orf115Q9H7X2 142 aa13.83□□□□□ -0.2
MSL3-207ENST00000398527 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms