RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
CD47-203ENST00000398258 PCDHGC3Q9UN70 934 aa7.23□□□□□ -1.25
CD47-203ENST00000398258 MSTNO14793 375 aa7.22□□□□□ -1.25
CD47-203ENST00000398258 GPR161Q8N6U8 529 aaKnown RBP7.22□□□□□ -1.25
CD47-203ENST00000398258 BAP1Q92560 729 aa7.22□□□□□ -1.25
CD47-203ENST00000398258 SPOCK3Q9BQ16 436 aa7.22□□□□□ -1.25
CD47-203ENST00000398258 PPFIA3O75145 1194 aa7.21□□□□□ -1.26
CD47-203ENST00000398258 ITGB2P05107 769 aa7.21□□□□□ -1.26
CD47-203ENST00000398258 WDR4P57081 412 aaKnown RBP7.21□□□□□ -1.26
CD47-203ENST00000398258 USP46P62068 366 aa7.21□□□□□ -1.26
CD47-203ENST00000398258 MDM2Q00987 491 aaPredicted RBP7.21□□□□□ -1.26
CD47-203ENST00000398258 P3H3Q8IVL6 736 aa7.21□□□□□ -1.26
CD47-203ENST00000398258 UNC93B1Q9H1C4 597 aa7.21□□□□□ -1.26
CD47-203ENST00000398258 KANK3Q6NY19 840 aa7.2□□□□□ -1.26
CD47-203ENST00000398258 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
CD47-203ENST00000398258 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
CD47-203ENST00000398258 CCNYL3P0C7X3 344 aa7.19□□□□□ -1.26
CD47-203ENST00000398258 ADH1CP00326 375 aa7.18□□□□□ -1.26
CD47-203ENST00000398258 ZNF511Q8NB15 262 aa7.18□□□□□ -1.26
CD47-203ENST00000398258 K7ELQ4 463 aaPredicted RBP7.17□□□□□ -1.26
CD47-203ENST00000398258 PROCP04070 461 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 NR3C2P08235 984 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 SCARF1Q14162 830 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 PLA2G4EQ3MJ16 856 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 C6orf118Q5T5N4 469 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 GPIHBP1Q8IV16 184 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 MPNDQ8N594 471 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 EVA1BQ9NVM1 165 aa7.17□□□□□ -1.26
CD47-203ENST00000398258 MS4A1P11836 297 aa7.16□□□□□ -1.26
CD47-203ENST00000398258 ITPKCQ96DU7 683 aa7.16□□□□□ -1.26
CD47-203ENST00000398258 DNMT3LQ9UJW3 386 aa7.16□□□□□ -1.26
CD47-203ENST00000398258 MAP2K5Q13163 448 aa7.15□□□□□ -1.26
CD47-203ENST00000398258 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
CD47-203ENST00000398258 CNTNAP3BQ96NU0 1288 aa7.15□□□□□ -1.26
CD47-203ENST00000398258 KRTAP4-2Q9BYR5 136 aa7.15□□□□□ -1.26
CD47-203ENST00000398258 CNTNAP3Q9BZ76 1288 aa7.15□□□□□ -1.26
CD47-203ENST00000398258 IRF6O14896 467 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 MAN1A2O60476 641 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 ZIC2O95409 532 aaPredicted RBP7.14□□□□□ -1.27
CD47-203ENST00000398258 VARSP26640 1264 aaKnown RBP7.14□□□□□ -1.27
CD47-203ENST00000398258 KCNH2Q12809 1159 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 PTPRNQ16849 979 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 RNFT1Q5M7Z0 435 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 SMYD5Q6GMV2 418 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 WHAMMQ8TF30 809 aa7.14□□□□□ -1.27
CD47-203ENST00000398258 FAM217BQ9NTX9 383 aaPredicted RBP7.14□□□□□ -1.27
CD47-203ENST00000398258 C6orf229H3BNL8 230 aa7.13□□□□□ -1.27
CD47-203ENST00000398258 FDX1P10109 184 aa7.13□□□□□ -1.27
CD47-203ENST00000398258 SOS2Q07890 1332 aaPredicted RBP7.12□□□□□ -1.27
CD47-203ENST00000398258 PLEKHG3A1L390 1219 aa7.12□□□□□ -1.27
CD47-203ENST00000398258 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
CD47-203ENST00000398258 FOXJ1Q92949 421 aa7.12□□□□□ -1.27
CD47-203ENST00000398258 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
CD47-203ENST00000398258 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
CD47-203ENST00000398258 NDUFV2P19404 249 aa7.11□□□□□ -1.27
CD47-203ENST00000398258 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
CD47-203ENST00000398258 GRM5P41594 1212 aa7.1□□□□□ -1.27
CD47-203ENST00000398258 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
CD47-203ENST00000398258 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
CD47-203ENST00000398258 PRR7Q8TB68 274 aa7.09□□□□□ -1.27
CD47-203ENST00000398258 CCDC102AQ96A19 550 aa7.09□□□□□ -1.27
CD47-203ENST00000398258 COL25A1Q9BXS0 654 aaPredicted RBP7.09□□□□□ -1.27
CD47-203ENST00000398258 MOXD2PA6NHM9 499 aa7.08□□□□□ -1.28
CD47-203ENST00000398258 BMP2P12643 396 aa7.08□□□□□ -1.28
CD47-203ENST00000398258 SLC24A1O60721 1099 aa7.07□□□□□ -1.28
CD47-203ENST00000398258 ARID5BQ14865 1188 aa7.07□□□□□ -1.28
CD47-203ENST00000398258 NUTM1Q86Y26 1132 aa7.07□□□□□ -1.28
CD47-203ENST00000398258 SPIRE2Q8WWL2 714 aa7.07□□□□□ -1.28
CD47-203ENST00000398258 GPCPD1Q9NPB8 672 aa7.07□□□□□ -1.28
CD47-203ENST00000398258 PTSQ03393 145 aa7.06□□□□□ -1.28
CD47-203ENST00000398258 FAM174AQ8TBP5 190 aa7.06□□□□□ -1.28
CD47-203ENST00000398258 MAP10Q9P2G4 905 aa7.06□□□□□ -1.28
CD47-203ENST00000398258 SVOPQ8N4V2 548 aa7.05□□□□□ -1.28
CD47-203ENST00000398258 SLURP2P0DP57 97 aa7.04□□□□□ -1.28
CD47-203ENST00000398258 SCARF2Q96GP6 870 aaPredicted RBP7.04□□□□□ -1.28
CD47-203ENST00000398258 DCAF5Q96JK2 942 aa7.04□□□□□ -1.28
CD47-203ENST00000398258 GOLGA2P5Q9HBQ8 144 aa7.04□□□□□ -1.28
CD47-203ENST00000398258 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
CD47-203ENST00000398258 F12P00748 615 aaPredicted RBP7.03□□□□□ -1.28
CD47-203ENST00000398258 MARSP56192 900 aaKnown RBP7.03□□□□□ -1.28
CD47-203ENST00000398258 NR5A1Q13285 461 aa7.03□□□□□ -1.28
CD47-203ENST00000398258 DESI1Q6ICB0 168 aa7.03□□□□□ -1.28
CD47-203ENST00000398258 NANOS1Q8WY41 292 aaKnown RBP7.03□□□□□ -1.28
CD47-203ENST00000398258 CFAP99D6REC4 459 aa7.02□□□□□ -1.29
CD47-203ENST00000398258 CLCN1P35523 988 aa7.02□□□□□ -1.29
CD47-203ENST00000398258 LYPD8Q6UX82 237 aa7.02□□□□□ -1.29
CD47-203ENST00000398258 GALNT6Q8NCL4 622 aa7.02□□□□□ -1.29
CD47-203ENST00000398258 FIGNL2A6NMB9 653 aa7.01□□□□□ -1.29
CD47-203ENST00000398258 CTHP32929 405 aa7.01□□□□□ -1.29
CD47-203ENST00000398258 MTMR2Q13614 643 aa7.01□□□□□ -1.29
CD47-203ENST00000398258 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
CD47-203ENST00000398258 SLC35F4A4IF30 521 aa6.99□□□□□ -1.29
CD47-203ENST00000398258 TTLL8A6PVC2 850 aa6.99□□□□□ -1.29
CD47-203ENST00000398258 PER1O15534 1290 aaPredicted RBP6.99□□□□□ -1.29
CD47-203ENST00000398258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.99□□□□□ -1.29
CD47-203ENST00000398258 LYPD4Q6UWN0 246 aa6.99□□□□□ -1.29
CD47-203ENST00000398258 VWA5B2Q8N398 1253 aa6.99□□□□□ -1.29
CD47-203ENST00000398258 C1QTNF2Q9BXJ5 285 aa6.99□□□□□ -1.29
CD47-203ENST00000398258 PCDHB15Q9Y5E8 787 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms