RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 UNC5CLQ8IV45 518 aa36.08■■■■□ 3.37
U2AF1-203ENST00000398137 NGDNQ8NEJ9 315 aaKnown RBP36.07■■■■□ 3.36
U2AF1-203ENST00000398137 GJD4Q96KN9 370 aaPredicted RBP36.06■■■■□ 3.36
U2AF1-203ENST00000398137 CARD11Q9BXL7 1154 aa36.06■■■■□ 3.36
U2AF1-203ENST00000398137 NWD2Q9ULI1 1742 aa36.05■■■■□ 3.36
U2AF1-203ENST00000398137 QRICH2Q9H0J4 1663 aa36.05■■■■□ 3.36
U2AF1-203ENST00000398137 HAP1P54257 671 aaPredicted RBP36.03■■■■□ 3.36
U2AF1-203ENST00000398137 CENPJQ9HC77 1338 aaPredicted RBP36.03■■■■□ 3.36
U2AF1-203ENST00000398137 POLR3AO14802 1390 aaPredicted RBP36.02■■■■□ 3.36
U2AF1-203ENST00000398137 FAM83GA6ND36 823 aa36.01■■■■□ 3.36
U2AF1-203ENST00000398137 CCDC61Q9Y6R9 512 aa35.99■■■■□ 3.35
U2AF1-203ENST00000398137 NRAPQ86VF7 1730 aa35.98■■■■□ 3.35
U2AF1-203ENST00000398137 PLEKHG3A1L390 1219 aa35.98■■■■□ 3.35
U2AF1-203ENST00000398137 ACEP12821 1306 aa35.97■■■■□ 3.35
U2AF1-203ENST00000398137 PAK3O75914 559 aaPredicted RBP35.95■■■■□ 3.35
U2AF1-203ENST00000398137 EP400Q96L91 3159 aa35.94■■■■□ 3.34
U2AF1-203ENST00000398137 VPS72Q15906 364 aa35.93■■■■□ 3.34
U2AF1-203ENST00000398137 COL14A1Q05707 1796 aaKnown RBP35.92■■■■□ 3.34
U2AF1-203ENST00000398137 ATAD2Q6PL18 1390 aa35.92■■■■□ 3.34
U2AF1-203ENST00000398137 CABP2Q9NPB3 220 aa35.92■■■■□ 3.34
U2AF1-203ENST00000398137 PHRF1Q9P1Y6 1649 aaKnown RBP35.92■■■■□ 3.34
U2AF1-203ENST00000398137 BRWD3Q6RI45 1802 aa35.92■■■■□ 3.34
U2AF1-203ENST00000398137 PPIP5K1Q6PFW1 1433 aa35.9■■■■□ 3.34
U2AF1-203ENST00000398137 SRPK2P78362 688 aaKnown RBP35.89■■■■□ 3.34
U2AF1-203ENST00000398137 USP47Q96K76 1375 aa35.87■■■■□ 3.33
U2AF1-203ENST00000398137 BTG4Q9NY30 223 aa35.85■■■■□ 3.33
U2AF1-203ENST00000398137 NUTM2GQ5VZR2 741 aa35.83■■■■□ 3.33
U2AF1-203ENST00000398137 ONECUT3O60422 494 aaPredicted RBP35.82■■■■□ 3.32
U2AF1-203ENST00000398137 KIAA0232Q92628 1395 aa35.79■■■■□ 3.32
U2AF1-203ENST00000398137 SEPT12Q8IYM1 358 aa35.79■■■■□ 3.32
U2AF1-203ENST00000398137 NRKQ7Z2Y5 1582 aa35.79■■■■□ 3.32
U2AF1-203ENST00000398137 CABP1Q9NZU7 370 aa35.78■■■■□ 3.32
U2AF1-203ENST00000398137 CCDC9Q9Y3X0 531 aaKnown RBP35.77■■■■□ 3.32
U2AF1-203ENST00000398137 PRDM11Q9NQV5 511 aa35.76■■■■□ 3.32
U2AF1-203ENST00000398137 ST20-MTHFSA0A0A6YYL1 179 aa35.75■■■■□ 3.31
U2AF1-203ENST00000398137 USP19O94966 1318 aa35.75■■■■□ 3.31
U2AF1-203ENST00000398137 EVC2Q86UK5 1308 aa35.75■■■■□ 3.31
U2AF1-203ENST00000398137 ABTB2Q8N961 1025 aa35.74■■■■□ 3.31
U2AF1-203ENST00000398137 USP6P35125 1406 aa35.74■■■■□ 3.31
U2AF1-203ENST00000398137 CHRNA2Q15822 529 aa35.73■■■■□ 3.31
U2AF1-203ENST00000398137 SSH2Q76I76 1423 aa35.73■■■■□ 3.31
U2AF1-203ENST00000398137 ZC3H6P61129 1189 aaKnown RBP35.72■■■■□ 3.31
U2AF1-203ENST00000398137 SBNO2Q9Y2G9 1366 aa35.72■■■■□ 3.31
U2AF1-203ENST00000398137 SPATA31A5Q5VU36 1347 aa35.7■■■■□ 3.31
U2AF1-203ENST00000398137 SPATA31A7Q8IWB4 1347 aa35.7■■■■□ 3.31
U2AF1-203ENST00000398137 BRD4O60885 1362 aaPredicted RBP35.69■■■■□ 3.3
U2AF1-203ENST00000398137 ZEB1P37275 1124 aaPredicted RBP35.69■■■■□ 3.3
U2AF1-203ENST00000398137 LMO7Q8WWI1 1683 aa35.68■■■■□ 3.3
U2AF1-203ENST00000398137 FAM98CQ17RN3 349 aaKnown RBP35.68■■■■□ 3.3
U2AF1-203ENST00000398137 AKAP12Q02952 1782 aa35.68■■■■□ 3.3
U2AF1-203ENST00000398137 EIF4G2P78344 907 aaKnown RBP eCLIP35.67■■■■□ 3.3
U2AF1-203ENST00000398137 PIK3C2AO00443 1686 aa35.66■■■■□ 3.3
U2AF1-203ENST00000398137 THSD7AQ9UPZ6 1657 aa35.66■■■■□ 3.3
U2AF1-203ENST00000398137 TESK2Q96S53 571 aa35.66■■■■□ 3.3
U2AF1-203ENST00000398137 CAMTA1Q9Y6Y1 1673 aa35.65■■■■□ 3.3
U2AF1-203ENST00000398137 CPDO75976 1380 aa35.65■■■■□ 3.3
U2AF1-203ENST00000398137 HSPA5P11021 654 aaKnown RBP35.65■■■■□ 3.3
U2AF1-203ENST00000398137 KRT27Q7Z3Y8 459 aa35.63■■■■□ 3.29
U2AF1-203ENST00000398137 NLRP13Q86W25 1043 aa35.63■■■■□ 3.29
U2AF1-203ENST00000398137 CCDC125Q86Z20 511 aa35.63■■■■□ 3.29
U2AF1-203ENST00000398137 SLIT3O75094 1523 aa35.62■■■■□ 3.29
U2AF1-203ENST00000398137 GCP02774 474 aa35.61■■■■□ 3.29
U2AF1-203ENST00000398137 SPATA31A1Q5TZJ5 1347 aa35.6■■■■□ 3.29
U2AF1-203ENST00000398137 BLMP54132 1417 aaPredicted RBP35.6■■■■□ 3.29
U2AF1-203ENST00000398137 CPSF1Q10570 1443 aaKnown RBP35.59■■■■□ 3.29
U2AF1-203ENST00000398137 STRN4Q9NRL3 753 aa35.58■■■■□ 3.29
U2AF1-203ENST00000398137 NLRP6P59044 892 aa35.55■■■■□ 3.28
U2AF1-203ENST00000398137 MON2Q7Z3U7 1717 aa35.54■■■■□ 3.28
U2AF1-203ENST00000398137 A0A0G2JS52 829 aa35.54■■■■□ 3.28
U2AF1-203ENST00000398137 MYT1Q01538 1121 aa35.54■■■■□ 3.28
U2AF1-203ENST00000398137 TTC21BQ7Z4L5 1316 aa35.54■■■■□ 3.28
U2AF1-203ENST00000398137 CD163L1Q9NR16 1453 aa35.53■■■■□ 3.28
U2AF1-203ENST00000398137 COL18A1P39060 1754 aa35.52■■■■□ 3.28
U2AF1-203ENST00000398137 ZNF692Q9BU19 519 aaPredicted RBP35.52■■■■□ 3.28
U2AF1-203ENST00000398137 LARP1Q6PKG0 1096 aaKnown RBP35.51■■■■□ 3.28
U2AF1-203ENST00000398137 TMF1P82094 1093 aa35.5■■■■□ 3.27
U2AF1-203ENST00000398137 DEFB132Q7Z7B7 95 aa35.5■■■■□ 3.27
U2AF1-203ENST00000398137 COL5A2P05997 1499 aaPredicted RBP35.49■■■■□ 3.27
U2AF1-203ENST00000398137 SLC24A1O60721 1099 aa35.49■■■■□ 3.27
U2AF1-203ENST00000398137 FAM182BQ5T319 152 aa35.49■■■■□ 3.27
U2AF1-203ENST00000398137 EVA1CP58658 441 aa35.46■■■■□ 3.27
U2AF1-203ENST00000398137 KTN1Q86UP2 1357 aaKnown RBP35.46■■■■□ 3.27
U2AF1-203ENST00000398137 USP35Q9P2H5 1018 aa35.45■■■■□ 3.27
U2AF1-203ENST00000398137 AATKQ6ZMQ8 1374 aa35.44■■■■□ 3.26
U2AF1-203ENST00000398137 TTC21AQ8NDW8 1320 aa35.44■■■■□ 3.26
U2AF1-203ENST00000398137 BARGINQ6ZT62 677 aa35.43■■■■□ 3.26
U2AF1-203ENST00000398137 NFAT5O94916 1531 aa35.41■■■■□ 3.26
U2AF1-203ENST00000398137 SLC12A5Q9H2X9 1139 aa35.4■■■■□ 3.26
U2AF1-203ENST00000398137 USP54Q70EL1 1684 aa35.4■■■■□ 3.26
U2AF1-203ENST00000398137 RGPD5Q99666 1765 aa35.39■■■■□ 3.26
U2AF1-203ENST00000398137 ZRANB1Q9UGI0 708 aa35.39■■■■□ 3.26
U2AF1-203ENST00000398137 AXIN2Q9Y2T1 843 aa35.39■■■■□ 3.26
U2AF1-203ENST00000398137 RGPD1P0DJD0 1748 aa35.38■■■■□ 3.25
U2AF1-203ENST00000398137 TNS1Q9HBL0 1735 aaKnown RBP35.38■■■■□ 3.25
U2AF1-203ENST00000398137 ZBTB7CA1YPR0 619 aa35.38■■■■□ 3.25
U2AF1-203ENST00000398137 ARHGEF25Q86VW2 580 aa35.38■■■■□ 3.25
U2AF1-203ENST00000398137 PUS7Q96PZ0 661 aaKnown RBP35.38■■■■□ 3.25
U2AF1-203ENST00000398137 CDCA8Q53HL2 280 aa35.37■■■■□ 3.25
U2AF1-203ENST00000398137 TCP11L2Q8N4U5 519 aa35.37■■■■□ 3.25
U2AF1-203ENST00000398137 CRB1P82279 1406 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms