RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 TXNDC2Q86VQ3 553 aa14.48□□□□□ -0.09
PUM3-202ENST00000397885 ANP32BQ92688 251 aaKnown RBP14.48□□□□□ -0.09
PUM3-202ENST00000397885 FAM13BQ9NYF5 915 aa14.48□□□□□ -0.09
PUM3-202ENST00000397885 NINLQ9Y2I6 1382 aa14.48□□□□□ -0.09
PUM3-202ENST00000397885 IQGAP3Q86VI3 1631 aa14.48□□□□□ -0.09
PUM3-202ENST00000397885 LAMC1P11047 1609 aa14.47□□□□□ -0.09
PUM3-202ENST00000397885 IBTKQ9P2D0 1353 aaPredicted RBP14.47□□□□□ -0.09
PUM3-202ENST00000397885 ZNF500O60304 480 aaPredicted RBP14.47□□□□□ -0.09
PUM3-202ENST00000397885 PRAG1Q86YV5 1406 aa14.47□□□□□ -0.09
PUM3-202ENST00000397885 CGNL1Q0VF96 1302 aa14.47□□□□□ -0.09
PUM3-202ENST00000397885 TMEM2Q9UHN6 1383 aa14.47□□□□□ -0.09
PUM3-202ENST00000397885 KIF20AO95235 890 aa14.47□□□□□ -0.09
PUM3-202ENST00000397885 TNNT2P45379 298 aaPredicted RBP14.47□□□□□ -0.09
PUM3-202ENST00000397885 ZNF521Q96K83 1311 aa14.46□□□□□ -0.09
PUM3-202ENST00000397885 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
PUM3-202ENST00000397885 CSPP1Q1MSJ5 1256 aa14.46□□□□□ -0.1
PUM3-202ENST00000397885 LTKP29376 864 aa14.45□□□□□ -0.1
PUM3-202ENST00000397885 GTPBP4Q9BZE4 634 aaKnown RBP14.45□□□□□ -0.1
PUM3-202ENST00000397885 NCOA3Q9Y6Q9 1424 aa14.45□□□□□ -0.1
PUM3-202ENST00000397885 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
PUM3-202ENST00000397885 CCDC94Q9BW85 323 aaPredicted RBP14.44□□□□□ -0.1
PUM3-202ENST00000397885 CIZ1Q9ULV3 898 aaPredicted RBP14.44□□□□□ -0.1
PUM3-202ENST00000397885 GOLGA2Q08379 1002 aa14.44□□□□□ -0.1
PUM3-202ENST00000397885 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
PUM3-202ENST00000397885 GPRASP1Q5JY77 1395 aa14.44□□□□□ -0.1
PUM3-202ENST00000397885 UBAP1LF5GYI3 381 aa14.43□□□□□ -0.1
PUM3-202ENST00000397885 IGHDP01880 384 aa14.43□□□□□ -0.1
PUM3-202ENST00000397885 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
PUM3-202ENST00000397885 PDE3AQ14432 1141 aa14.43□□□□□ -0.1
PUM3-202ENST00000397885 GAS2L3Q86XJ1 694 aa14.43□□□□□ -0.1
PUM3-202ENST00000397885 GBP4Q96PP9 640 aa14.43□□□□□ -0.1
PUM3-202ENST00000397885 MCM5P33992 734 aa14.43□□□□□ -0.1
PUM3-202ENST00000397885 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
PUM3-202ENST00000397885 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
PUM3-202ENST00000397885 UQCRHLA0A096LP55 91 aa14.42□□□□□ -0.1
PUM3-202ENST00000397885 UQCRHP07919 91 aa14.42□□□□□ -0.1
PUM3-202ENST00000397885 DDIT3P35638 169 aa14.42□□□□□ -0.1
PUM3-202ENST00000397885 NOL7Q9UMY1 257 aaKnown RBP14.42□□□□□ -0.1
PUM3-202ENST00000397885 R3HCC1Q9Y3T6 440 aaKnown RBP14.42□□□□□ -0.1
PUM3-202ENST00000397885 ZSCAN20P17040 1043 aaPredicted RBP14.42□□□□□ -0.1
PUM3-202ENST00000397885 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
PUM3-202ENST00000397885 NASPP49321 788 aaPredicted RBP14.42□□□□□ -0.1
PUM3-202ENST00000397885 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
PUM3-202ENST00000397885 TAF3Q5VWG9 929 aa14.41□□□□□ -0.1
PUM3-202ENST00000397885 STRCP1A6NGW2 1772 aa14.4□□□□□ -0.1
PUM3-202ENST00000397885 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
PUM3-202ENST00000397885 SLFN5Q08AF3 891 aa14.4□□□□□ -0.1
PUM3-202ENST00000397885 ZHX1Q9UKY1 873 aaPredicted RBP14.4□□□□□ -0.1
PUM3-202ENST00000397885 TMEM131LA2VDJ0 1609 aa14.4□□□□□ -0.1
PUM3-202ENST00000397885 PMFBP1Q8TBY8 1022 aa14.4□□□□□ -0.11
PUM3-202ENST00000397885 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.11
PUM3-202ENST00000397885 STAC3Q96MF2 364 aa14.4□□□□□ -0.11
PUM3-202ENST00000397885 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.11
PUM3-202ENST00000397885 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
PUM3-202ENST00000397885 PLEKHH1Q9ULM0 1364 aa14.39□□□□□ -0.11
PUM3-202ENST00000397885 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
PUM3-202ENST00000397885 TOM1O60784 492 aa14.39□□□□□ -0.11
PUM3-202ENST00000397885 SASS6Q6UVJ0 657 aa14.38□□□□□ -0.11
PUM3-202ENST00000397885 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
PUM3-202ENST00000397885 LRRC7Q96NW7 1537 aa14.37□□□□□ -0.11
PUM3-202ENST00000397885 TAF7LQ5H9L4 462 aa14.37□□□□□ -0.11
PUM3-202ENST00000397885 PPP4R3BQ5MIZ7 849 aa14.37□□□□□ -0.11
PUM3-202ENST00000397885 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.37□□□□□ -0.11
PUM3-202ENST00000397885 IPO4Q8TEX9 1081 aaKnown RBP14.37□□□□□ -0.11
PUM3-202ENST00000397885 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
PUM3-202ENST00000397885 SMC5Q8IY18 1101 aa14.36□□□□□ -0.11
PUM3-202ENST00000397885 SNX21Q969T3 373 aa14.36□□□□□ -0.11
PUM3-202ENST00000397885 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
PUM3-202ENST00000397885 ZFYVE9O95405 1425 aa14.36□□□□□ -0.11
PUM3-202ENST00000397885 CHGAP10645 457 aaKnown RBP14.36□□□□□ -0.11
PUM3-202ENST00000397885 SPHKAPQ2M3C7 1700 aa14.36□□□□□ -0.11
PUM3-202ENST00000397885 RIMS2Q9UQ26 1411 aa14.36□□□□□ -0.11
PUM3-202ENST00000397885 TMF1P82094 1093 aa14.35□□□□□ -0.11
PUM3-202ENST00000397885 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
PUM3-202ENST00000397885 PDLIM2Q96JY6 352 aa14.35□□□□□ -0.11
PUM3-202ENST00000397885 ADAMTS8Q9UP79 889 aa14.35□□□□□ -0.11
PUM3-202ENST00000397885 RGL3Q3MIN7 710 aa14.35□□□□□ -0.11
PUM3-202ENST00000397885 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
PUM3-202ENST00000397885 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
PUM3-202ENST00000397885 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
PUM3-202ENST00000397885 KCNA6P17658 529 aa14.34□□□□□ -0.11
PUM3-202ENST00000397885 CLEC17AQ6ZS10 378 aa14.34□□□□□ -0.11
PUM3-202ENST00000397885 DISP3Q9P2K9 1392 aa14.33□□□□□ -0.11
PUM3-202ENST00000397885 NBPF1Q3BBV0 1214 aa14.33□□□□□ -0.12
PUM3-202ENST00000397885 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
PUM3-202ENST00000397885 ZKSCAN5Q9Y2L8 839 aa14.33□□□□□ -0.12
PUM3-202ENST00000397885 ZNF445P59923 1031 aa14.32□□□□□ -0.12
PUM3-202ENST00000397885 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
PUM3-202ENST00000397885 CC2D1BQ5T0F9 858 aaKnown RBP14.32□□□□□ -0.12
PUM3-202ENST00000397885 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
PUM3-202ENST00000397885 TESK2Q96S53 571 aa14.32□□□□□ -0.12
PUM3-202ENST00000397885 GOLGA6L22H0YM25 854 aa14.32□□□□□ -0.12
PUM3-202ENST00000397885 PRDM10Q9NQV6 1147 aa14.32□□□□□ -0.12
PUM3-202ENST00000397885 RBM25P49756 843 aaKnown RBP14.31□□□□□ -0.12
PUM3-202ENST00000397885 E9PSI1 815 aa14.31□□□□□ -0.12
PUM3-202ENST00000397885 PIP4K2BP78356 416 aa14.31□□□□□ -0.12
PUM3-202ENST00000397885 WDR43Q15061 677 aaKnown RBP eCLIP14.31□□□□□ -0.123e-6■■■■■ 38.4
PUM3-202ENST00000397885 PANK3Q9H999 370 aa14.31□□□□□ -0.12
PUM3-202ENST00000397885 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.31□□□□□ -0.12
PUM3-202ENST00000397885 XIRP1Q702N8 1843 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms