RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 SEPT12Q8IYM1 358 aa20.69■□□□□ 0.9
SNRNP25-203ENST00000397876 TOPAZ1Q8N9V7 1692 aa20.69■□□□□ 0.9
SNRNP25-203ENST00000397876 CDK19Q9BWU1 502 aa20.68■□□□□ 0.9
SNRNP25-203ENST00000397876 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
SNRNP25-203ENST00000397876 BTG4Q9NY30 223 aa20.67■□□□□ 0.9
SNRNP25-203ENST00000397876 A0A0G2JS52 829 aa20.65■□□□□ 0.9
SNRNP25-203ENST00000397876 ONECUT3O60422 494 aaPredicted RBP20.65■□□□□ 0.9
SNRNP25-203ENST00000397876 MYT1Q01538 1121 aa20.65■□□□□ 0.9
SNRNP25-203ENST00000397876 NBPF1Q3BBV0 1214 aa20.65■□□□□ 0.9
SNRNP25-203ENST00000397876 POLR3AO14802 1390 aaPredicted RBP20.64■□□□□ 0.89
SNRNP25-203ENST00000397876 PRDM11Q9NQV5 511 aa20.64■□□□□ 0.89
SNRNP25-203ENST00000397876 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.89
SNRNP25-203ENST00000397876 CCDC61Q9Y6R9 512 aa20.64■□□□□ 0.89
SNRNP25-203ENST00000397876 PHRF1Q9P1Y6 1649 aaKnown RBP20.64■□□□□ 0.89
SNRNP25-203ENST00000397876 KRT27Q7Z3Y8 459 aa20.63■□□□□ 0.89
SNRNP25-203ENST00000397876 ACEP12821 1306 aa20.62■□□□□ 0.89
SNRNP25-203ENST00000397876 CENPJQ9HC77 1338 aaPredicted RBP20.62■□□□□ 0.89
SNRNP25-203ENST00000397876 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
SNRNP25-203ENST00000397876 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
SNRNP25-203ENST00000397876 PLEKHG3A1L390 1219 aa20.6■□□□□ 0.89
SNRNP25-203ENST00000397876 QRICH2Q9H0J4 1663 aa20.6■□□□□ 0.89
SNRNP25-203ENST00000397876 KIAA0232Q92628 1395 aa20.59■□□□□ 0.89
SNRNP25-203ENST00000397876 SRPK2P78362 688 aaKnown RBP20.59■□□□□ 0.89
SNRNP25-203ENST00000397876 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
SNRNP25-203ENST00000397876 SPATA31A5Q5VU36 1347 aa20.58■□□□□ 0.89
SNRNP25-203ENST00000397876 SPATA31A7Q8IWB4 1347 aa20.58■□□□□ 0.89
SNRNP25-203ENST00000397876 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
SNRNP25-203ENST00000397876 NUTM2GQ5VZR2 741 aa20.57■□□□□ 0.88
SNRNP25-203ENST00000397876 NRKQ7Z2Y5 1582 aa20.56■□□□□ 0.88
SNRNP25-203ENST00000397876 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
SNRNP25-203ENST00000397876 THSD7AQ9UPZ6 1657 aa20.55■□□□□ 0.88
SNRNP25-203ENST00000397876 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
SNRNP25-203ENST00000397876 DEFB132Q7Z7B7 95 aa20.55■□□□□ 0.88
SNRNP25-203ENST00000397876 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
SNRNP25-203ENST00000397876 ZC3H6P61129 1189 aaKnown RBP20.54■□□□□ 0.88
SNRNP25-203ENST00000397876 ABTB2Q8N961 1025 aa20.54■□□□□ 0.88
SNRNP25-203ENST00000397876 CABP2Q9NPB3 220 aa20.54■□□□□ 0.88
SNRNP25-203ENST00000397876 BRD4O60885 1362 aaPredicted RBP20.52■□□□□ 0.88
SNRNP25-203ENST00000397876 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
SNRNP25-203ENST00000397876 USP19O94966 1318 aa20.52■□□□□ 0.87
SNRNP25-203ENST00000397876 SPATA31A1Q5TZJ5 1347 aa20.52■□□□□ 0.87
SNRNP25-203ENST00000397876 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
SNRNP25-203ENST00000397876 BAG6P46379 1132 aa20.5■□□□□ 0.87
SNRNP25-203ENST00000397876 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
SNRNP25-203ENST00000397876 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
SNRNP25-203ENST00000397876 CPDO75976 1380 aa20.49■□□□□ 0.87
SNRNP25-203ENST00000397876 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
SNRNP25-203ENST00000397876 NLRP13Q86W25 1043 aa20.49■□□□□ 0.87
SNRNP25-203ENST00000397876 SSH2Q76I76 1423 aa20.49■□□□□ 0.87
SNRNP25-203ENST00000397876 USP6P35125 1406 aa20.48■□□□□ 0.87
SNRNP25-203ENST00000397876 EVC2Q86UK5 1308 aa20.48■□□□□ 0.87
SNRNP25-203ENST00000397876 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
SNRNP25-203ENST00000397876 EVA1CP58658 441 aa20.47■□□□□ 0.87
SNRNP25-203ENST00000397876 CAMTA1Q9Y6Y1 1673 aa20.46■□□□□ 0.87
SNRNP25-203ENST00000397876 CABP1Q9NZU7 370 aa20.46■□□□□ 0.87
SNRNP25-203ENST00000397876 SRCAPQ6ZRS2 3230 aa20.45■□□□□ 0.86
SNRNP25-203ENST00000397876 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
SNRNP25-203ENST00000397876 USP35Q9P2H5 1018 aa20.45■□□□□ 0.86
SNRNP25-203ENST00000397876 GCP02774 474 aa20.44■□□□□ 0.86
SNRNP25-203ENST00000397876 TNS1Q9HBL0 1735 aaKnown RBP20.43■□□□□ 0.86
SNRNP25-203ENST00000397876 SLIT3O75094 1523 aa20.43■□□□□ 0.86
SNRNP25-203ENST00000397876 NLRP6P59044 892 aa20.42■□□□□ 0.86
SNRNP25-203ENST00000397876 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
SNRNP25-203ENST00000397876 LARP1Q6PKG0 1096 aaKnown RBP20.41■□□□□ 0.86
SNRNP25-203ENST00000397876 FAM196AQ6ZSG2 479 aa20.41■□□□□ 0.86
SNRNP25-203ENST00000397876 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
SNRNP25-203ENST00000397876 COL5A2P05997 1499 aaPredicted RBP20.41■□□□□ 0.86
SNRNP25-203ENST00000397876 PIK3C2AO00443 1686 aa20.41■□□□□ 0.86
SNRNP25-203ENST00000397876 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
SNRNP25-203ENST00000397876 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.85
SNRNP25-203ENST00000397876 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
SNRNP25-203ENST00000397876 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
SNRNP25-203ENST00000397876 THRAP3Q9Y2W1 955 aaKnown RBP20.38■□□□□ 0.85
SNRNP25-203ENST00000397876 AKAP12Q02952 1782 aa20.38■□□□□ 0.85
SNRNP25-203ENST00000397876 AATKQ6ZMQ8 1374 aa20.37■□□□□ 0.85
SNRNP25-203ENST00000397876 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
SNRNP25-203ENST00000397876 CRB1P82279 1406 aa20.36■□□□□ 0.85
SNRNP25-203ENST00000397876 LRP5O75197 1615 aa20.36■□□□□ 0.85
SNRNP25-203ENST00000397876 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
SNRNP25-203ENST00000397876 SBNO2Q9Y2G9 1366 aa20.35■□□□□ 0.85
SNRNP25-203ENST00000397876 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
SNRNP25-203ENST00000397876 TRIM37O94972 964 aa20.35■□□□□ 0.85
SNRNP25-203ENST00000397876 TTC21BQ7Z4L5 1316 aa20.34■□□□□ 0.85
SNRNP25-203ENST00000397876 TTC21AQ8NDW8 1320 aa20.34■□□□□ 0.85
SNRNP25-203ENST00000397876 CPSF1Q10570 1443 aaKnown RBP20.34■□□□□ 0.85
SNRNP25-203ENST00000397876 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
SNRNP25-203ENST00000397876 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.85
SNRNP25-203ENST00000397876 KTN1Q86UP2 1357 aaKnown RBP20.33■□□□□ 0.84
SNRNP25-203ENST00000397876 PARD3Q8TEW0 1356 aa20.33■□□□□ 0.84
SNRNP25-203ENST00000397876 KCNH5Q8NCM2 988 aa20.32■□□□□ 0.84
SNRNP25-203ENST00000397876 COL18A1P39060 1754 aa20.31■□□□□ 0.84
SNRNP25-203ENST00000397876 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
SNRNP25-203ENST00000397876 APBA3O96018 575 aa20.31■□□□□ 0.84
SNRNP25-203ENST00000397876 EZH2Q15910 746 aaKnown RBP20.31■□□□□ 0.84
SNRNP25-203ENST00000397876 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
SNRNP25-203ENST00000397876 LRRC37A3O60309 1634 aa20.29■□□□□ 0.84
SNRNP25-203ENST00000397876 CAMKK2Q96RR4 588 aa20.29■□□□□ 0.84
SNRNP25-203ENST00000397876 WDR17Q8IZU2 1322 aa20.28■□□□□ 0.84
SNRNP25-203ENST00000397876 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
SNRNP25-203ENST00000397876 SOX12O15370 315 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms