RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
MCF2L-208ENST00000397030 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
MCF2L-208ENST00000397030 CEBPZQ03701 1054 aaKnown RBP20.92■□□□□ 0.94
MCF2L-208ENST00000397030 MTHFSP49914 203 aa20.91■□□□□ 0.94
MCF2L-208ENST00000397030 GAS2L2Q8NHY3 880 aa20.91■□□□□ 0.94
MCF2L-208ENST00000397030 TMEM87AQ8NBN3 555 aa20.91■□□□□ 0.94
MCF2L-208ENST00000397030 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
MCF2L-208ENST00000397030 THEMISQ8N1K5 641 aaPredicted RBP20.91■□□□□ 0.94
MCF2L-208ENST00000397030 RRP1P56182 461 aaKnown RBP20.91■□□□□ 0.94
MCF2L-208ENST00000397030 SCLT1Q96NL6 688 aa20.91■□□□□ 0.94
MCF2L-208ENST00000397030 MAGEC2Q9UBF1 373 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-208ENST00000397030 NEBLO76041 1014 aa20.9■□□□□ 0.94
MCF2L-208ENST00000397030 CCDC173Q0VFZ6 552 aa20.9■□□□□ 0.94
MCF2L-208ENST00000397030 ZNF76P36508 570 aa20.9■□□□□ 0.94
MCF2L-208ENST00000397030 RDXP35241 583 aaKnown RBP20.9■□□□□ 0.94
MCF2L-208ENST00000397030 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.94
MCF2L-208ENST00000397030 C1orf115Q9H7X2 142 aa20.89■□□□□ 0.94
MCF2L-208ENST00000397030 USP5P45974 858 aa20.89■□□□□ 0.93
MCF2L-208ENST00000397030 ZC3H6P61129 1189 aaKnown RBP20.89■□□□□ 0.93
MCF2L-208ENST00000397030 ANKLE2Q86XL3 938 aa20.89■□□□□ 0.93
MCF2L-208ENST00000397030 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.89■□□□□ 0.93
MCF2L-208ENST00000397030 CLASRPQ8N2M8 674 aaKnown RBP20.88■□□□□ 0.93
MCF2L-208ENST00000397030 FKBP4Q02790 459 aaKnown RBP eCLIP20.88■□□□□ 0.931e-6■■■■□ 21.9
MCF2L-208ENST00000397030 RAI14Q9P0K7 980 aa20.88■□□□□ 0.93
MCF2L-208ENST00000397030 PSMA5P28066 241 aa20.88■□□□□ 0.93
MCF2L-208ENST00000397030 TXLNAP40222 546 aa20.88■□□□□ 0.93
MCF2L-208ENST00000397030 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-208ENST00000397030 ZNF530Q6P9A1 599 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-208ENST00000397030 AK7Q96M32 723 aa20.87■□□□□ 0.93
MCF2L-208ENST00000397030 STK3Q13188 491 aa20.87■□□□□ 0.93
MCF2L-208ENST00000397030 SOGA3Q5TF21 947 aa20.87■□□□□ 0.93
MCF2L-208ENST00000397030 CCDC69A6NI79 296 aa20.87■□□□□ 0.93
MCF2L-208ENST00000397030 PANK1Q8TE04 598 aa20.86■□□□□ 0.93
MCF2L-208ENST00000397030 TMOD2Q9NZR1 351 aa20.86■□□□□ 0.93
MCF2L-208ENST00000397030 CCDC57Q2TAC2 916 aa20.86■□□□□ 0.93
MCF2L-208ENST00000397030 TANGO6Q9C0B7 1094 aa20.86■□□□□ 0.93
MCF2L-208ENST00000397030 WDHD1O75717 1129 aaPredicted RBP20.86■□□□□ 0.93
MCF2L-208ENST00000397030 SDF4Q9BRK5 362 aa20.86■□□□□ 0.93
MCF2L-208ENST00000397030 SEPT11Q9NVA2 429 aaKnown RBP20.86■□□□□ 0.93
MCF2L-208ENST00000397030 SSBP05455 408 aaKnown RBP eCLIP20.86■□□□□ 0.93
MCF2L-208ENST00000397030 WIZO95785 1651 aa20.86■□□□□ 0.93
MCF2L-208ENST00000397030 ANKRD62A6NC57 917 aa20.85■□□□□ 0.93
MCF2L-208ENST00000397030 ZPR1O75312 459 aa20.85■□□□□ 0.93
MCF2L-208ENST00000397030 AFAP1Q8N556 730 aa20.85■□□□□ 0.93
MCF2L-208ENST00000397030 SKOR2Q2VWA4 1001 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-208ENST00000397030 IFT57Q9NWB7 429 aa20.84■□□□□ 0.93
MCF2L-208ENST00000397030 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
MCF2L-208ENST00000397030 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
MCF2L-208ENST00000397030 CA8P35219 290 aa20.83■□□□□ 0.93
MCF2L-208ENST00000397030 PLCD3Q8N3E9 789 aa20.83■□□□□ 0.92
MCF2L-208ENST00000397030 CDK19Q9BWU1 502 aa20.83■□□□□ 0.92
MCF2L-208ENST00000397030 PDE4AP27815 886 aa20.82■□□□□ 0.92
MCF2L-208ENST00000397030 NACAP1Q9BZK3 213 aa20.82■□□□□ 0.92
MCF2L-208ENST00000397030 NEFHP12036 1026 aa20.82■□□□□ 0.92
MCF2L-208ENST00000397030 CDR1P51861 262 aa20.82■□□□□ 0.92
MCF2L-208ENST00000397030 SMC2O95347 1197 aa20.82■□□□□ 0.92
MCF2L-208ENST00000397030 HDGFL1Q5TGJ6 251 aa20.82■□□□□ 0.92
MCF2L-208ENST00000397030 SULT6B1Q6IMI4 303 aa20.81■□□□□ 0.92
MCF2L-208ENST00000397030 ANKIB1Q9P2G1 1089 aa20.81■□□□□ 0.92
MCF2L-208ENST00000397030 MNS1Q8NEH6 495 aa20.81■□□□□ 0.92
MCF2L-208ENST00000397030 TDO2P48775 406 aa20.8■□□□□ 0.92
MCF2L-208ENST00000397030 ZNF771Q7L3S4 317 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-208ENST00000397030 NGLY1Q96IV0 654 aa20.8■□□□□ 0.92
MCF2L-208ENST00000397030 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
MCF2L-208ENST00000397030 LRP2BPQ9P2M1 347 aa20.79■□□□□ 0.92
MCF2L-208ENST00000397030 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
MCF2L-208ENST00000397030 CRACR2BQ8N4Y2 399 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-208ENST00000397030 NAT10Q9H0A0 1025 aaKnown RBP20.79■□□□□ 0.92
MCF2L-208ENST00000397030 CFAP70Q5T0N1 1121 aa20.78■□□□□ 0.92
MCF2L-208ENST00000397030 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
MCF2L-208ENST00000397030 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
MCF2L-208ENST00000397030 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.78■□□□□ 0.92
MCF2L-208ENST00000397030 ECM2O94769 699 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-208ENST00000397030 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.922e-6■■□□□ 12.9
MCF2L-208ENST00000397030 GNAI3P08754 354 aa20.76■□□□□ 0.91
MCF2L-208ENST00000397030 ABCF2Q9UG63 623 aa20.76■□□□□ 0.91
MCF2L-208ENST00000397030 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
MCF2L-208ENST00000397030 PTCD1O75127 700 aaKnown RBP20.76■□□□□ 0.91
MCF2L-208ENST00000397030 CDC45O75419 566 aa20.76■□□□□ 0.91
MCF2L-208ENST00000397030 CABP1Q9NZU7 370 aa20.76■□□□□ 0.91
MCF2L-208ENST00000397030 RRS1Q15050 365 aaKnown RBP20.75■□□□□ 0.91
MCF2L-208ENST00000397030 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
MCF2L-208ENST00000397030 SSR1P43307 286 aaKnown RBP20.75■□□□□ 0.91
MCF2L-208ENST00000397030 TWISTNBQ3B726 338 aaPredicted RBP20.75■□□□□ 0.91
MCF2L-208ENST00000397030 MYO6Q9UM54 1294 aa20.75■□□□□ 0.91
MCF2L-208ENST00000397030 WWC3Q9ULE0 1092 aa20.74■□□□□ 0.91
MCF2L-208ENST00000397030 FILIP1LQ4L180 1135 aa20.74■□□□□ 0.91
MCF2L-208ENST00000397030 GNAI2P04899 355 aa20.74■□□□□ 0.91
MCF2L-208ENST00000397030 STK38Q15208 465 aa20.74■□□□□ 0.91
MCF2L-208ENST00000397030 TMOD3Q9NYL9 352 aa20.73■□□□□ 0.91
MCF2L-208ENST00000397030 POLR3DP05423 398 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-208ENST00000397030 TRIM22Q8IYM9 498 aa20.73■□□□□ 0.91
MCF2L-208ENST00000397030 IDH1O75874 414 aaKnown RBP20.72■□□□□ 0.91
MCF2L-208ENST00000397030 RPGRQ92834 1020 aaKnown RBP20.72■□□□□ 0.91
MCF2L-208ENST00000397030 LIG1P18858 919 aa20.72■□□□□ 0.91
MCF2L-208ENST00000397030 MPRIPQ6WCQ1 1025 aa20.72■□□□□ 0.91
MCF2L-208ENST00000397030 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-208ENST00000397030 SMARCE1Q969G3 411 aa20.71■□□□□ 0.91
MCF2L-208ENST00000397030 HIP1O00291 1037 aa20.71■□□□□ 0.91
MCF2L-208ENST00000397030 RAPGEF3O95398 923 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms