RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
CCHCR1-203ENST00000396268 RIMS1Q86UR5 1692 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-203ENST00000396268 NSD3Q9BZ95 1437 aa17.99■□□□□ 0.47
CCHCR1-203ENST00000396268 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
CCHCR1-203ENST00000396268 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
CCHCR1-203ENST00000396268 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
CCHCR1-203ENST00000396268 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 UBE2Q2Q8WVN8 375 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 POLR3AO14802 1390 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 ADAMTS13Q76LX8 1427 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 RUNDC1Q96C34 613 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.47
CCHCR1-203ENST00000396268 SEC24BO95487 1268 aa17.96■□□□□ 0.47
CCHCR1-203ENST00000396268 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
CCHCR1-203ENST00000396268 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 MTHFSP49914 203 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
CCHCR1-203ENST00000396268 ROBO2Q9HCK4 1378 aa17.93■□□□□ 0.46
CCHCR1-203ENST00000396268 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 USP19O94966 1318 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 RLBP1P12271 317 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 NUTM2FA1L443 756 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PTPRUQ92729 1446 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 BECN1Q14457 450 aa17.9■□□□□ 0.46
CCHCR1-203ENST00000396268 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 ANKRD36BQ8N2N9 1353 aa17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 CD163L1Q9NR16 1453 aa17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 ADAMTSL3P82987 1691 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 SLIT1O75093 1534 aa17.87■□□□□ 0.45
CCHCR1-203ENST00000396268 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
CCHCR1-203ENST00000396268 WASLO00401 505 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 CEP170BQ9Y4F5 1589 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 RRAGDQ9NQL2 400 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 FBLN1P23142 703 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 RBM33Q96EV2 1170 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 MED14O60244 1454 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 ATAD2Q6PL18 1390 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.45
CCHCR1-203ENST00000396268 TECPR2O15040 1411 aa17.83■□□□□ 0.44
CCHCR1-203ENST00000396268 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-203ENST00000396268 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
CCHCR1-203ENST00000396268 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 NUDT16Q96DE0 195 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 FYB1O15117 783 aa17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 AAMPQ13685 434 aa17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 CPS1P31327 1500 aa17.81■□□□□ 0.44
CCHCR1-203ENST00000396268 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
CCHCR1-203ENST00000396268 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
CCHCR1-203ENST00000396268 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 KNDC1Q76NI1 1749 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 KCNA6P17658 529 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 SMC4Q9NTJ3 1288 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 IQSEC2Q5JU85 1478 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-203ENST00000396268 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
CCHCR1-203ENST00000396268 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-203ENST00000396268 EXOSC9Q06265 439 aaKnown RBP17.77■□□□□ 0.44
CCHCR1-203ENST00000396268 SIRT1Q96EB6 747 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 USP32Q8NFA0 1604 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 NME9Q86XW9 330 aa17.75■□□□□ 0.43
CCHCR1-203ENST00000396268 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
CCHCR1-203ENST00000396268 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms