RNA–Protein interactions for RNA: ENST00000396183.7

CTNNB1-202, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-202ENST00000396183 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
CTNNB1-202ENST00000396183 PCDHB15Q9Y5E8 787 aa17.82■□□□□ 0.44
CTNNB1-202ENST00000396183 SYNMO15061 1565 aa17.82■□□□□ 0.44
CTNNB1-202ENST00000396183 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
CTNNB1-202ENST00000396183 AMPHP49418 695 aa17.81■□□□□ 0.44
CTNNB1-202ENST00000396183 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
CTNNB1-202ENST00000396183 HSP90AB2PQ58FF8 381 aa17.81■□□□□ 0.44
CTNNB1-202ENST00000396183 MCM10Q7L590 875 aa17.81■□□□□ 0.44
CTNNB1-202ENST00000396183 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
CTNNB1-202ENST00000396183 ARXQ96QS3 562 aa17.8■□□□□ 0.44
CTNNB1-202ENST00000396183 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
CTNNB1-202ENST00000396183 NLRP6P59044 892 aa17.79■□□□□ 0.44
CTNNB1-202ENST00000396183 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
CTNNB1-202ENST00000396183 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 ACEP12821 1306 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 TNRQ92752 1358 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 WDR63Q8IWG1 891 aa17.78■□□□□ 0.44
CTNNB1-202ENST00000396183 SBNO2Q9Y2G9 1366 aa17.77■□□□□ 0.44
CTNNB1-202ENST00000396183 PPIP5K1Q6PFW1 1433 aa17.77■□□□□ 0.44
CTNNB1-202ENST00000396183 TRIM27P14373 513 aa17.76■□□□□ 0.43
CTNNB1-202ENST00000396183 TMEM57Q8N5G2 664 aa17.76■□□□□ 0.43
CTNNB1-202ENST00000396183 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
CTNNB1-202ENST00000396183 GLI2P10070 1586 aa17.76■□□□□ 0.43
CTNNB1-202ENST00000396183 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
CTNNB1-202ENST00000396183 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 MYT1Q01538 1121 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 ADGRB1O14514 1584 aa17.75■□□□□ 0.43
CTNNB1-202ENST00000396183 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
CTNNB1-202ENST00000396183 FOXO3O43524 673 aa17.74■□□□□ 0.43
CTNNB1-202ENST00000396183 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
CTNNB1-202ENST00000396183 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
CTNNB1-202ENST00000396183 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 PDE3AQ14432 1141 aa17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 LMTK2Q8IWU2 1503 aa17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 LAMC1P11047 1609 aa17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 RWDD1Q9H446 243 aaPredicted RBP17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
CTNNB1-202ENST00000396183 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
CTNNB1-202ENST00000396183 SEC24BO95487 1268 aa17.72■□□□□ 0.43
CTNNB1-202ENST00000396183 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
CTNNB1-202ENST00000396183 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
CTNNB1-202ENST00000396183 QRICH2Q9H0J4 1663 aa17.72■□□□□ 0.43
CTNNB1-202ENST00000396183 FCHSD2O94868 740 aa17.71■□□□□ 0.43
CTNNB1-202ENST00000396183 KCNA6P17658 529 aa17.71■□□□□ 0.43
CTNNB1-202ENST00000396183 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
CTNNB1-202ENST00000396183 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
CTNNB1-202ENST00000396183 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
CTNNB1-202ENST00000396183 MS4A1P11836 297 aa17.7■□□□□ 0.42
CTNNB1-202ENST00000396183 MVPQ14764 893 aaKnown RBP17.7■□□□□ 0.42
CTNNB1-202ENST00000396183 ROBO2Q9HCK4 1378 aa17.7■□□□□ 0.42
CTNNB1-202ENST00000396183 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 ESCO1Q5FWF5 840 aa17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 C8orf58Q8NAV2 365 aa17.69■□□□□ 0.42
CTNNB1-202ENST00000396183 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
CTNNB1-202ENST00000396183 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
CTNNB1-202ENST00000396183 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
CTNNB1-202ENST00000396183 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
CTNNB1-202ENST00000396183 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 THEMISQ8N1K5 641 aaPredicted RBP17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 ARHGAP31Q2M1Z3 1444 aa17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 INSRP06213 1382 aa17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 MYOM1P52179 1685 aa17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
CTNNB1-202ENST00000396183 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
CTNNB1-202ENST00000396183 NGEFQ8N5V2 710 aa17.66■□□□□ 0.42
CTNNB1-202ENST00000396183 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
CTNNB1-202ENST00000396183 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
CTNNB1-202ENST00000396183 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
CTNNB1-202ENST00000396183 PTPRMP28827 1452 aa17.65■□□□□ 0.42
CTNNB1-202ENST00000396183 ALKQ9UM73 1620 aa17.65■□□□□ 0.42
CTNNB1-202ENST00000396183 PSME1Q06323 249 aa17.64■□□□□ 0.42
CTNNB1-202ENST00000396183 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
CTNNB1-202ENST00000396183 IL13P35225 146 aa17.64■□□□□ 0.41
CTNNB1-202ENST00000396183 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
CTNNB1-202ENST00000396183 PPLO60437 1756 aa17.63■□□□□ 0.41
CTNNB1-202ENST00000396183 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
CTNNB1-202ENST00000396183 NSD2O96028 1365 aa17.63■□□□□ 0.41
CTNNB1-202ENST00000396183 GNAI1P63096 354 aa17.63■□□□□ 0.41
CTNNB1-202ENST00000396183 DDX19BQ9UMR2 479 aa17.63■□□□□ 0.41
CTNNB1-202ENST00000396183 DIP2BQ9P265 1576 aa17.62■□□□□ 0.41
CTNNB1-202ENST00000396183 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
CTNNB1-202ENST00000396183 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
CTNNB1-202ENST00000396183 RICTORQ6R327 1708 aa17.61■□□□□ 0.41
CTNNB1-202ENST00000396183 F6X3S4 739 aa17.61■□□□□ 0.41
CTNNB1-202ENST00000396183 DDRGK1Q96HY6 314 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms