RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
ITGB1-202ENST00000396033 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
ITGB1-202ENST00000396033 TRMT2AQ8IZ69 625 aaKnown RBP15.91■□□□□ 0.14
ITGB1-202ENST00000396033 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
ITGB1-202ENST00000396033 PRR36Q9H6K5 1346 aa15.91■□□□□ 0.14
ITGB1-202ENST00000396033 PLIN1O60240 522 aa15.91■□□□□ 0.14
ITGB1-202ENST00000396033 WWC1Q8IX03 1113 aa15.91■□□□□ 0.14
ITGB1-202ENST00000396033 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
ITGB1-202ENST00000396033 TBX22Q9Y458 520 aa15.91■□□□□ 0.14
ITGB1-202ENST00000396033 PRKCSHP14314 528 aaPredicted RBP15.91■□□□□ 0.14
ITGB1-202ENST00000396033 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
ITGB1-202ENST00000396033 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
ITGB1-202ENST00000396033 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
ITGB1-202ENST00000396033 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
ITGB1-202ENST00000396033 AMOTL2Q9Y2J4 779 aa15.9■□□□□ 0.14
ITGB1-202ENST00000396033 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
ITGB1-202ENST00000396033 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
ITGB1-202ENST00000396033 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
ITGB1-202ENST00000396033 NME9Q86XW9 330 aa15.88■□□□□ 0.13
ITGB1-202ENST00000396033 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
ITGB1-202ENST00000396033 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
ITGB1-202ENST00000396033 TOPAZ1Q8N9V7 1692 aa15.87■□□□□ 0.13
ITGB1-202ENST00000396033 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
ITGB1-202ENST00000396033 PPM1GO15355 546 aaPredicted RBP15.86■□□□□ 0.13
ITGB1-202ENST00000396033 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
ITGB1-202ENST00000396033 FBLN1P23142 703 aa15.85■□□□□ 0.13
ITGB1-202ENST00000396033 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
ITGB1-202ENST00000396033 POLKQ9UBT6 870 aa15.85■□□□□ 0.13
ITGB1-202ENST00000396033 CCDC27Q2M243 656 aa15.85■□□□□ 0.13
ITGB1-202ENST00000396033 COG3Q96JB2 828 aa15.85■□□□□ 0.13
ITGB1-202ENST00000396033 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
ITGB1-202ENST00000396033 ADAMTSL3P82987 1691 aa15.85■□□□□ 0.13
ITGB1-202ENST00000396033 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
ITGB1-202ENST00000396033 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-202ENST00000396033 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
ITGB1-202ENST00000396033 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
ITGB1-202ENST00000396033 WDR63Q8IWG1 891 aa15.84■□□□□ 0.13
ITGB1-202ENST00000396033 MAP2P11137 1827 aaKnown RBP15.83■□□□□ 0.13
ITGB1-202ENST00000396033 ACEP12821 1306 aa15.83■□□□□ 0.12
ITGB1-202ENST00000396033 PLEKHF1Q96S99 279 aa15.83■□□□□ 0.12
ITGB1-202ENST00000396033 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.12
ITGB1-202ENST00000396033 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
ITGB1-202ENST00000396033 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
ITGB1-202ENST00000396033 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
ITGB1-202ENST00000396033 PLEKHG3A1L390 1219 aa15.82■□□□□ 0.12
ITGB1-202ENST00000396033 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
ITGB1-202ENST00000396033 NRKQ7Z2Y5 1582 aa15.82■□□□□ 0.12
ITGB1-202ENST00000396033 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
ITGB1-202ENST00000396033 PNNQ9H307 717 aaKnown RBP15.81■□□□□ 0.12
ITGB1-202ENST00000396033 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
ITGB1-202ENST00000396033 CDK12Q9NYV4 1490 aaPredicted RBP15.81■□□□□ 0.12
ITGB1-202ENST00000396033 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
ITGB1-202ENST00000396033 USP6P35125 1406 aa15.8■□□□□ 0.12
ITGB1-202ENST00000396033 ANKLE2Q86XL3 938 aa15.8■□□□□ 0.12
ITGB1-202ENST00000396033 KCNA6P17658 529 aa15.8■□□□□ 0.12
ITGB1-202ENST00000396033 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
ITGB1-202ENST00000396033 LRRC7Q96NW7 1537 aa15.79■□□□□ 0.12
ITGB1-202ENST00000396033 BCAR3O75815 825 aa15.79■□□□□ 0.12
ITGB1-202ENST00000396033 RRS1Q15050 365 aaKnown RBP15.78■□□□□ 0.12
ITGB1-202ENST00000396033 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
ITGB1-202ENST00000396033 FCHSD2O94868 740 aa15.77■□□□□ 0.12
ITGB1-202ENST00000396033 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.11
ITGB1-202ENST00000396033 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
ITGB1-202ENST00000396033 OVOS2A0A0J9YW53 1432 aa15.76■□□□□ 0.11
ITGB1-202ENST00000396033 OVOS2Q6IE36 1432 aa15.76■□□□□ 0.11
ITGB1-202ENST00000396033 NEFMP07197 916 aa15.76■□□□□ 0.11
ITGB1-202ENST00000396033 PRKAR2BP31323 418 aa15.76■□□□□ 0.11
ITGB1-202ENST00000396033 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
ITGB1-202ENST00000396033 IL13P35225 146 aa15.75■□□□□ 0.11
ITGB1-202ENST00000396033 RIPK4P57078 832 aa15.75■□□□□ 0.11
ITGB1-202ENST00000396033 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
ITGB1-202ENST00000396033 NGDNQ8NEJ9 315 aaKnown RBP15.75■□□□□ 0.11
ITGB1-202ENST00000396033 RGPD8O14715 1765 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-202ENST00000396033 SETD1BQ9UPS6 1966 aaKnown RBP15.75■□□□□ 0.11
ITGB1-202ENST00000396033 HMOX1P09601 288 aa15.75■□□□□ 0.11
ITGB1-202ENST00000396033 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
ITGB1-202ENST00000396033 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
ITGB1-202ENST00000396033 SSH2Q76I76 1423 aa15.74■□□□□ 0.11
ITGB1-202ENST00000396033 CHD2O14647 1828 aaKnown RBP15.73■□□□□ 0.11
ITGB1-202ENST00000396033 TTC21AQ8NDW8 1320 aa15.73■□□□□ 0.11
ITGB1-202ENST00000396033 NALCNQ8IZF0 1738 aa15.72■□□□□ 0.11
ITGB1-202ENST00000396033 FMN2Q9NZ56 1722 aa15.72■□□□□ 0.11
ITGB1-202ENST00000396033 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
ITGB1-202ENST00000396033 TSR2Q969E8 191 aaKnown RBP15.72■□□□□ 0.11
ITGB1-202ENST00000396033 IL16Q14005 1332 aa15.71■□□□□ 0.11
ITGB1-202ENST00000396033 USP31Q70CQ4 1352 aa15.7■□□□□ 0.1
ITGB1-202ENST00000396033 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
ITGB1-202ENST00000396033 SOX12O15370 315 aa15.7■□□□□ 0.1
ITGB1-202ENST00000396033 FRAT1Q92837 279 aaPredicted RBP15.7■□□□□ 0.1
ITGB1-202ENST00000396033 NFE2L2Q16236 605 aa15.69■□□□□ 0.1
ITGB1-202ENST00000396033 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
ITGB1-202ENST00000396033 PDE3AQ14432 1141 aa15.69■□□□□ 0.1
ITGB1-202ENST00000396033 BCL2L13Q9BXK5 485 aa15.69■□□□□ 0.1
ITGB1-202ENST00000396033 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
ITGB1-202ENST00000396033 EXOSC9Q06265 439 aaKnown RBP15.67■□□□□ 0.1
ITGB1-202ENST00000396033 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
ITGB1-202ENST00000396033 PEAK1Q9H792 1746 aa15.67■□□□□ 0.1
ITGB1-202ENST00000396033 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
ITGB1-202ENST00000396033 RBM33Q96EV2 1170 aaKnown RBP15.67■□□□□ 0.1
ITGB1-202ENST00000396033 PANK1Q8TE04 598 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms