RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 THSD7AQ9UPZ6 1657 aa20.1■□□□□ 0.81
CHCHD2-201ENST00000395422 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
CHCHD2-201ENST00000395422 COL14A1Q05707 1796 aaKnown RBP20.1■□□□□ 0.81
CHCHD2-201ENST00000395422 ALS2Q96Q42 1657 aa20.1■□□□□ 0.81
CHCHD2-201ENST00000395422 GPRASP1Q5JY77 1395 aa20.09■□□□□ 0.81
CHCHD2-201ENST00000395422 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
CHCHD2-201ENST00000395422 RGPD1P0DJD0 1748 aa20.08■□□□□ 0.81
CHCHD2-201ENST00000395422 ADGRB1O14514 1584 aa20.08■□□□□ 0.8
CHCHD2-201ENST00000395422 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
CHCHD2-201ENST00000395422 TRIM37O94972 964 aa20.07■□□□□ 0.8
CHCHD2-201ENST00000395422 PRDM11Q9NQV5 511 aa20.07■□□□□ 0.8
CHCHD2-201ENST00000395422 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
CHCHD2-201ENST00000395422 TNS1Q9HBL0 1735 aaKnown RBP20.07■□□□□ 0.8
CHCHD2-201ENST00000395422 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
CHCHD2-201ENST00000395422 TULP4Q9NRJ4 1543 aa20.04■□□□□ 0.8
CHCHD2-201ENST00000395422 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
CHCHD2-201ENST00000395422 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
CHCHD2-201ENST00000395422 CHRNA2Q15822 529 aa20.04■□□□□ 0.8
CHCHD2-201ENST00000395422 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
CHCHD2-201ENST00000395422 CRYBG1Q9Y4K1 1723 aa20.04■□□□□ 0.8
CHCHD2-201ENST00000395422 NGDNQ8NEJ9 315 aaKnown RBP20.03■□□□□ 0.8
CHCHD2-201ENST00000395422 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.8
CHCHD2-201ENST00000395422 EIF3AQ14152 1382 aaKnown RBP20.01■□□□□ 0.79
CHCHD2-201ENST00000395422 APBA3O96018 575 aa20.01■□□□□ 0.79
CHCHD2-201ENST00000395422 STRN4Q9NRL3 753 aa20.01■□□□□ 0.79
CHCHD2-201ENST00000395422 PARD3Q8TEW0 1356 aa19.98■□□□□ 0.79
CHCHD2-201ENST00000395422 ZC3H6P61129 1189 aaKnown RBP19.98■□□□□ 0.79
CHCHD2-201ENST00000395422 USP35Q9P2H5 1018 aa19.98■□□□□ 0.79
CHCHD2-201ENST00000395422 NUTM2GQ5VZR2 741 aa19.97■□□□□ 0.79
CHCHD2-201ENST00000395422 ATP7BP35670 1465 aa19.97■□□□□ 0.79
CHCHD2-201ENST00000395422 YY1P25490 414 aa19.95■□□□□ 0.78
CHCHD2-201ENST00000395422 BARGINQ6ZT62 677 aa19.95■□□□□ 0.78
CHCHD2-201ENST00000395422 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
CHCHD2-201ENST00000395422 SSH2Q76I76 1423 aa19.94■□□□□ 0.78
CHCHD2-201ENST00000395422 KDM2AQ9Y2K7 1162 aa19.94■□□□□ 0.78
CHCHD2-201ENST00000395422 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
CHCHD2-201ENST00000395422 LARP1Q6PKG0 1096 aaKnown RBP19.93■□□□□ 0.78
CHCHD2-201ENST00000395422 PHRF1Q9P1Y6 1649 aaKnown RBP19.92■□□□□ 0.78
CHCHD2-201ENST00000395422 RREB1Q92766 1687 aa19.91■□□□□ 0.78
CHCHD2-201ENST00000395422 DCAF11Q8TEB1 546 aa19.91■□□□□ 0.78
CHCHD2-201ENST00000395422 CAMTA1Q9Y6Y1 1673 aa19.91■□□□□ 0.78
CHCHD2-201ENST00000395422 EVA1CP58658 441 aa19.9■□□□□ 0.78
CHCHD2-201ENST00000395422 NUP188Q5SRE5 1749 aa19.9■□□□□ 0.78
CHCHD2-201ENST00000395422 POLR3AO14802 1390 aaPredicted RBP19.89■□□□□ 0.77
CHCHD2-201ENST00000395422 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.77
CHCHD2-201ENST00000395422 NBPF14Q5TI25 921 aa19.89■□□□□ 0.77
CHCHD2-201ENST00000395422 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
CHCHD2-201ENST00000395422 ACEP12821 1306 aa19.88■□□□□ 0.77
CHCHD2-201ENST00000395422 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
CHCHD2-201ENST00000395422 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
CHCHD2-201ENST00000395422 CPDO75976 1380 aa19.86■□□□□ 0.77
CHCHD2-201ENST00000395422 KCNQ2O43526 872 aa19.86■□□□□ 0.77
CHCHD2-201ENST00000395422 SPON1Q9HCB6 807 aa19.86■□□□□ 0.77
CHCHD2-201ENST00000395422 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
CHCHD2-201ENST00000395422 USP19O94966 1318 aa19.85■□□□□ 0.77
CHCHD2-201ENST00000395422 LMO7Q8WWI1 1683 aa19.84■□□□□ 0.77
CHCHD2-201ENST00000395422 ABTB2Q8N961 1025 aa19.84■□□□□ 0.77
CHCHD2-201ENST00000395422 PPP1R1BQ9UD71 204 aaPredicted RBP19.84■□□□□ 0.77
CHCHD2-201ENST00000395422 ARHGEF28Q8N1W1 1705 aaKnown RBP19.83■□□□□ 0.77
CHCHD2-201ENST00000395422 UTRNP46939 3433 aa19.83■□□□□ 0.77
CHCHD2-201ENST00000395422 PLEKHG3A1L390 1219 aa19.83■□□□□ 0.77
CHCHD2-201ENST00000395422 THRAP3Q9Y2W1 955 aaKnown RBP19.83■□□□□ 0.77
CHCHD2-201ENST00000395422 CCDC61Q9Y6R9 512 aa19.83■□□□□ 0.77
CHCHD2-201ENST00000395422 ITSN1Q15811 1721 aa19.82■□□□□ 0.76
CHCHD2-201ENST00000395422 ANO8Q9HCE9 1232 aaPredicted RBP19.82■□□□□ 0.76
CHCHD2-201ENST00000395422 NINLQ9Y2I6 1382 aa19.82■□□□□ 0.76
CHCHD2-201ENST00000395422 COL5A2P05997 1499 aaPredicted RBP19.81■□□□□ 0.76
CHCHD2-201ENST00000395422 GCP02774 474 aa19.81■□□□□ 0.76
CHCHD2-201ENST00000395422 TOPAZ1Q8N9V7 1692 aa19.81■□□□□ 0.76
CHCHD2-201ENST00000395422 PTF1AQ7RTS3 328 aa19.8■□□□□ 0.76
CHCHD2-201ENST00000395422 STAC3Q96MF2 364 aa19.79■□□□□ 0.76
CHCHD2-201ENST00000395422 PDGFDQ9GZP0 370 aaPredicted RBP19.79■□□□□ 0.76
CHCHD2-201ENST00000395422 OVOS2A0A0G2JMS6 1433 aa19.77■□□□□ 0.76
CHCHD2-201ENST00000395422 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
CHCHD2-201ENST00000395422 CRB1P82279 1406 aa19.77■□□□□ 0.76
CHCHD2-201ENST00000395422 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.76
CHCHD2-201ENST00000395422 PEAK1Q9H792 1746 aa19.76■□□□□ 0.75
CHCHD2-201ENST00000395422 PARP4Q9UKK3 1724 aaKnown RBP19.76■□□□□ 0.75
CHCHD2-201ENST00000395422 PLSCR1O15162 318 aa19.76■□□□□ 0.75
CHCHD2-201ENST00000395422 NLRP13Q86W25 1043 aa19.76■□□□□ 0.75
CHCHD2-201ENST00000395422 PROM2Q8N271 834 aa19.75■□□□□ 0.75
CHCHD2-201ENST00000395422 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
CHCHD2-201ENST00000395422 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
CHCHD2-201ENST00000395422 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
CHCHD2-201ENST00000395422 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
CHCHD2-201ENST00000395422 ZBTB7AO95365 584 aa19.72■□□□□ 0.75
CHCHD2-201ENST00000395422 DDB1Q16531 1140 aa19.72■□□□□ 0.75
CHCHD2-201ENST00000395422 BCL11BQ9C0K0 894 aaPredicted RBP19.72■□□□□ 0.75
CHCHD2-201ENST00000395422 CABP2Q9NPB3 220 aa19.72■□□□□ 0.75
CHCHD2-201ENST00000395422 LRRC37A3O60309 1634 aa19.72■□□□□ 0.75
CHCHD2-201ENST00000395422 AATKQ6ZMQ8 1374 aa19.71■□□□□ 0.75
CHCHD2-201ENST00000395422 CASZ1Q86V15 1759 aa19.71■□□□□ 0.75
CHCHD2-201ENST00000395422 PTGER2P43116 358 aa19.71■□□□□ 0.75
CHCHD2-201ENST00000395422 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
CHCHD2-201ENST00000395422 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
CHCHD2-201ENST00000395422 MARCH10Q8NA82 808 aaPredicted RBP19.7■□□□□ 0.74
CHCHD2-201ENST00000395422 TOM1L2Q6ZVM7 507 aa19.69■□□□□ 0.74
CHCHD2-201ENST00000395422 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
CHCHD2-201ENST00000395422 RGPD3A6NKT7 1758 aaPredicted RBP19.68■□□□□ 0.74
CHCHD2-201ENST00000395422 RGPD4Q7Z3J3 1758 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms