RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
C15orf39-202ENST00000394987 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
C15orf39-202ENST00000394987 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
C15orf39-202ENST00000394987 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
C15orf39-202ENST00000394987 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
C15orf39-202ENST00000394987 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
C15orf39-202ENST00000394987 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
C15orf39-202ENST00000394987 RIC3Q7Z5B4 369 aa16.69■□□□□ 0.26
C15orf39-202ENST00000394987 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
C15orf39-202ENST00000394987 THUMPD2Q9BTF0 503 aaKnown RBP16.69■□□□□ 0.26
C15orf39-202ENST00000394987 KIAA2012Q0VF49 1180 aa16.69■□□□□ 0.26
C15orf39-202ENST00000394987 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
C15orf39-202ENST00000394987 MEX3CQ5U5Q3 659 aaKnown RBP16.68■□□□□ 0.26
C15orf39-202ENST00000394987 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
C15orf39-202ENST00000394987 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
C15orf39-202ENST00000394987 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
C15orf39-202ENST00000394987 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
C15orf39-202ENST00000394987 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
C15orf39-202ENST00000394987 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
C15orf39-202ENST00000394987 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
C15orf39-202ENST00000394987 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
C15orf39-202ENST00000394987 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
C15orf39-202ENST00000394987 IFIT2P09913 472 aaKnown RBP16.67■□□□□ 0.26
C15orf39-202ENST00000394987 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
C15orf39-202ENST00000394987 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
C15orf39-202ENST00000394987 ST18O60284 1047 aa16.66■□□□□ 0.26
C15orf39-202ENST00000394987 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
C15orf39-202ENST00000394987 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
C15orf39-202ENST00000394987 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
C15orf39-202ENST00000394987 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.261e-7■□□□□ 9
C15orf39-202ENST00000394987 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
C15orf39-202ENST00000394987 TESK2Q96S53 571 aa16.65■□□□□ 0.26
C15orf39-202ENST00000394987 AMOTL2Q9Y2J4 779 aa16.65■□□□□ 0.26
C15orf39-202ENST00000394987 CLSTN1O94985 981 aa16.64■□□□□ 0.25
C15orf39-202ENST00000394987 FOXO3O43524 673 aa16.64■□□□□ 0.25
C15orf39-202ENST00000394987 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
C15orf39-202ENST00000394987 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
C15orf39-202ENST00000394987 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
C15orf39-202ENST00000394987 KDM6BO15054 1643 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 APPP05067 770 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 FBLN1P23142 703 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 ZNF530Q6P9A1 599 aaPredicted RBP16.63■□□□□ 0.25
C15orf39-202ENST00000394987 MPNDQ8N594 471 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
C15orf39-202ENST00000394987 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
C15orf39-202ENST00000394987 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
C15orf39-202ENST00000394987 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
C15orf39-202ENST00000394987 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
C15orf39-202ENST00000394987 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
C15orf39-202ENST00000394987 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
C15orf39-202ENST00000394987 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
C15orf39-202ENST00000394987 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
C15orf39-202ENST00000394987 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
C15orf39-202ENST00000394987 CFAP65Q6ZU64 1925 aaKnown RBP16.61■□□□□ 0.25
C15orf39-202ENST00000394987 TNRQ92752 1358 aa16.61■□□□□ 0.25
C15orf39-202ENST00000394987 NME9Q86XW9 330 aa16.61■□□□□ 0.25
C15orf39-202ENST00000394987 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
C15orf39-202ENST00000394987 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
C15orf39-202ENST00000394987 WASLO00401 505 aaPredicted RBP16.6■□□□□ 0.25
C15orf39-202ENST00000394987 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
C15orf39-202ENST00000394987 TTC37Q6PGP7 1564 aa16.6■□□□□ 0.25
C15orf39-202ENST00000394987 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
C15orf39-202ENST00000394987 RAD21O60216 631 aa16.58■□□□□ 0.25
C15orf39-202ENST00000394987 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.25
C15orf39-202ENST00000394987 TNNT3P45378 269 aaPredicted RBP16.58■□□□□ 0.24
C15orf39-202ENST00000394987 VPS37DQ86XT2 251 aa16.58■□□□□ 0.24
C15orf39-202ENST00000394987 KLHL34Q8N239 644 aa16.58■□□□□ 0.24
C15orf39-202ENST00000394987 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
C15orf39-202ENST00000394987 CREBRFQ8IUR6 639 aa16.57■□□□□ 0.24
C15orf39-202ENST00000394987 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
C15orf39-202ENST00000394987 RASSF8Q8NHQ8 419 aa16.57■□□□□ 0.24
C15orf39-202ENST00000394987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.56■□□□□ 0.24
C15orf39-202ENST00000394987 NRDCO43847 1150 aa16.56■□□□□ 0.24
C15orf39-202ENST00000394987 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
C15orf39-202ENST00000394987 SF3A1Q15459 793 aaKnown RBP16.56■□□□□ 0.24
C15orf39-202ENST00000394987 REC8O95072 547 aa16.56■□□□□ 0.24
C15orf39-202ENST00000394987 MYL6BP14649 208 aa16.56■□□□□ 0.24
C15orf39-202ENST00000394987 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
C15orf39-202ENST00000394987 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
C15orf39-202ENST00000394987 MCM10Q7L590 875 aa16.56■□□□□ 0.24
C15orf39-202ENST00000394987 MYO5CQ9NQX4 1742 aa16.55■□□□□ 0.24
C15orf39-202ENST00000394987 RNF214Q8ND24 703 aa16.55■□□□□ 0.24
C15orf39-202ENST00000394987 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
C15orf39-202ENST00000394987 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 ARHGEF5Q12774 1597 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 GCC2Q8IWJ2 1684 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 GOLGA6L6A8MZA4 724 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
C15orf39-202ENST00000394987 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
C15orf39-202ENST00000394987 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 ARHGEF12Q9NZN5 1544 aa16.54■□□□□ 0.24
C15orf39-202ENST00000394987 H3BQV1 296 aa16.53■□□□□ 0.24
C15orf39-202ENST00000394987 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
C15orf39-202ENST00000394987 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
C15orf39-202ENST00000394987 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
C15orf39-202ENST00000394987 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms