RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 PCGF6Q9BYE7 350 aa9.32□□□□□ -0.92
NUP58-204ENST00000394327 RRP7BPQ9NSQ0 103 aa9.32□□□□□ -0.92
NUP58-204ENST00000394327 FAM135AQ9P2D6 1515 aa9.32□□□□□ -0.92
NUP58-204ENST00000394327 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
NUP58-204ENST00000394327 PSEN2P49810 448 aa9.31□□□□□ -0.92
NUP58-204ENST00000394327 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
NUP58-204ENST00000394327 AXIN2Q9Y2T1 843 aa9.31□□□□□ -0.92
NUP58-204ENST00000394327 PRDM15P57071 1507 aaPredicted RBP9.31□□□□□ -0.92
NUP58-204ENST00000394327 IQGAP3Q86VI3 1631 aa9.31□□□□□ -0.92
NUP58-204ENST00000394327 FER1L4A9Z1Z3 1794 aa9.31□□□□□ -0.92
NUP58-204ENST00000394327 BARGINQ6ZT62 677 aa9.31□□□□□ -0.92
NUP58-204ENST00000394327 KDM5DQ9BY66 1539 aa9.3□□□□□ -0.92
NUP58-204ENST00000394327 CEP152O94986 1710 aa9.3□□□□□ -0.92
NUP58-204ENST00000394327 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
NUP58-204ENST00000394327 HRCP23327 699 aa9.3□□□□□ -0.92
NUP58-204ENST00000394327 MROH1Q8NDA8 1641 aa9.29□□□□□ -0.92
NUP58-204ENST00000394327 RAB3GAP2Q9H2M9 1393 aa9.29□□□□□ -0.92
NUP58-204ENST00000394327 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
NUP58-204ENST00000394327 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
NUP58-204ENST00000394327 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
NUP58-204ENST00000394327 MROH2AA6NES4 1674 aa9.28□□□□□ -0.92
NUP58-204ENST00000394327 TET3O43151 1660 aa9.28□□□□□ -0.92
NUP58-204ENST00000394327 VWDEQ8N2E2 1590 aa9.27□□□□□ -0.93
NUP58-204ENST00000394327 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
NUP58-204ENST00000394327 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.93
NUP58-204ENST00000394327 KANK1Q14678 1352 aa9.27□□□□□ -0.93
NUP58-204ENST00000394327 CAMSAP1Q5T5Y3 1602 aa9.27□□□□□ -0.93
NUP58-204ENST00000394327 CFAP65Q6ZU64 1925 aaKnown RBP9.26□□□□□ -0.93
NUP58-204ENST00000394327 KIF3BO15066 747 aa9.26□□□□□ -0.93
NUP58-204ENST00000394327 GNPATO15228 680 aa9.26□□□□□ -0.93
NUP58-204ENST00000394327 FCHSD2O94868 740 aa9.26□□□□□ -0.93
NUP58-204ENST00000394327 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
NUP58-204ENST00000394327 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
NUP58-204ENST00000394327 PTPREP23469 700 aa9.25□□□□□ -0.93
NUP58-204ENST00000394327 FAM161AQ3B820 660 aa9.25□□□□□ -0.93
NUP58-204ENST00000394327 PROX2Q3B8N5 592 aa9.25□□□□□ -0.93
NUP58-204ENST00000394327 ADAMTSL3P82987 1691 aa9.25□□□□□ -0.93
NUP58-204ENST00000394327 LMTK2Q8IWU2 1503 aa9.25□□□□□ -0.93
NUP58-204ENST00000394327 HIC1Q14526 733 aa9.24□□□□□ -0.93
NUP58-204ENST00000394327 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
NUP58-204ENST00000394327 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
NUP58-204ENST00000394327 ABCC3O15438 1527 aa9.24□□□□□ -0.93
NUP58-204ENST00000394327 EFCAB6Q5THR3 1501 aa9.24□□□□□ -0.93
NUP58-204ENST00000394327 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
NUP58-204ENST00000394327 E9PCH4 1651 aa9.24□□□□□ -0.93
NUP58-204ENST00000394327 NUP155O75694 1391 aa9.23□□□□□ -0.93
NUP58-204ENST00000394327 SPHKAPQ2M3C7 1700 aa9.23□□□□□ -0.93
NUP58-204ENST00000394327 CNTLNQ9NXG0 1405 aa9.23□□□□□ -0.93
NUP58-204ENST00000394327 RIMS1Q86UR5 1692 aaKnown RBP9.23□□□□□ -0.93
NUP58-204ENST00000394327 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 ARHGAP33O14559 1287 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 MADDQ8WXG6 1647 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 PZPP20742 1482 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 PRSS12P56730 875 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 GGT6Q6P531 493 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 PHOX2BQ99453 314 aa9.22□□□□□ -0.93
NUP58-204ENST00000394327 C3P01024 1663 aa9.21□□□□□ -0.93
NUP58-204ENST00000394327 RPRD2Q5VT52 1461 aaKnown RBP9.21□□□□□ -0.93
NUP58-204ENST00000394327 PREX1Q8TCU6 1659 aa9.21□□□□□ -0.94
NUP58-204ENST00000394327 SETD1BQ9UPS6 1966 aaKnown RBP9.2□□□□□ -0.94
NUP58-204ENST00000394327 IRF6O14896 467 aa9.2□□□□□ -0.94
NUP58-204ENST00000394327 ESF1Q9H501 851 aaKnown RBP9.2□□□□□ -0.94
NUP58-204ENST00000394327 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
NUP58-204ENST00000394327 ARHGAP31Q2M1Z3 1444 aa9.19□□□□□ -0.94
NUP58-204ENST00000394327 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
NUP58-204ENST00000394327 KIF1BO60333 1816 aa9.18□□□□□ -0.94
NUP58-204ENST00000394327 MLECQ14165 292 aa9.18□□□□□ -0.94
NUP58-204ENST00000394327 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
NUP58-204ENST00000394327 CCDC102AQ96A19 550 aa9.18□□□□□ -0.94
NUP58-204ENST00000394327 TRIM6-TRIM34B2RNG4 842 aa9.17□□□□□ -0.94
NUP58-204ENST00000394327 MPHOSPH9Q99550 1183 aa9.17□□□□□ -0.94
NUP58-204ENST00000394327 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
NUP58-204ENST00000394327 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
NUP58-204ENST00000394327 DHX57Q6P158 1386 aaKnown RBP9.17□□□□□ -0.94
NUP58-204ENST00000394327 PBX2P40425 430 aa9.16□□□□□ -0.94
NUP58-204ENST00000394327 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
NUP58-204ENST00000394327 NPATQ14207 1427 aa9.16□□□□□ -0.94
NUP58-204ENST00000394327 TRPM2O94759 1503 aa9.16□□□□□ -0.94
NUP58-204ENST00000394327 SPATA31D1Q6ZQQ2 1576 aa9.16□□□□□ -0.94
NUP58-204ENST00000394327 KDM5AP29375 1690 aaKnown RBP9.15□□□□□ -0.94
NUP58-204ENST00000394327 TRIM66O15016 1216 aa9.15□□□□□ -0.94
NUP58-204ENST00000394327 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.94
NUP58-204ENST00000394327 NLRP7Q8WX94 980 aa9.15□□□□□ -0.94
NUP58-204ENST00000394327 SLC4A5Q9BY07 1137 aa9.15□□□□□ -0.94
NUP58-204ENST00000394327 RBM27Q9P2N5 1060 aaKnown RBP9.15□□□□□ -0.94
NUP58-204ENST00000394327 PIK3C2BO00750 1634 aa9.15□□□□□ -0.95
NUP58-204ENST00000394327 SMAPO00193 183 aa9.14□□□□□ -0.95
NUP58-204ENST00000394327 EYA1Q99502 592 aa9.14□□□□□ -0.95
NUP58-204ENST00000394327 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
NUP58-204ENST00000394327 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
NUP58-204ENST00000394327 ZMYM3Q14202 1370 aa9.14□□□□□ -0.95
NUP58-204ENST00000394327 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.959e-11■■□□□ 14.5
NUP58-204ENST00000394327 ERVK-7P63135 1459 aa9.13□□□□□ -0.95
NUP58-204ENST00000394327 MYO5BQ9ULV0 1848 aa9.13□□□□□ -0.95
NUP58-204ENST00000394327 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
NUP58-204ENST00000394327 PTPRTO14522 1441 aa9.13□□□□□ -0.95
NUP58-204ENST00000394327 SYNMO15061 1565 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms