RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 CDK12Q9NYV4 1490 aaPredicted RBP32.89■■■□□ 2.86
HMGA2-202ENST00000393577 RBM6P78332 1123 aaKnown RBP32.89■■■□□ 2.86
HMGA2-202ENST00000393577 TRPC5Q9UL62 973 aaPredicted RBP32.89■■■□□ 2.86
HMGA2-202ENST00000393577 ATRNO75882 1429 aa32.88■■■□□ 2.85
HMGA2-202ENST00000393577 CRYBG1Q9Y4K1 1723 aa32.88■■■□□ 2.85
HMGA2-202ENST00000393577 SLIT2O94813 1529 aa32.87■■■□□ 2.85
HMGA2-202ENST00000393577 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.86■■■□□ 2.85
HMGA2-202ENST00000393577 CLSPNQ9HAW4 1339 aa32.86■■■□□ 2.85
HMGA2-202ENST00000393577 CABP1Q9NZU7 370 aa32.85■■■□□ 2.85
HMGA2-202ENST00000393577 PLCH1Q4KWH8 1693 aa32.85■■■□□ 2.85
HMGA2-202ENST00000393577 SBNO2Q9Y2G9 1366 aa32.84■■■□□ 2.85
HMGA2-202ENST00000393577 RGS12O14924 1447 aa32.84■■■□□ 2.85
HMGA2-202ENST00000393577 NUTM2GQ5VZR2 741 aa32.8■■■□□ 2.84
HMGA2-202ENST00000393577 UNC5CLQ8IV45 518 aa32.8■■■□□ 2.84
HMGA2-202ENST00000393577 PHRF1Q9P1Y6 1649 aaKnown RBP32.8■■■□□ 2.84
HMGA2-202ENST00000393577 NWD2Q9ULI1 1742 aa32.8■■■□□ 2.84
HMGA2-202ENST00000393577 ATAD2Q6PL18 1390 aa32.78■■■□□ 2.84
HMGA2-202ENST00000393577 FAM83GA6ND36 823 aa32.77■■■□□ 2.84
HMGA2-202ENST00000393577 USP6P35125 1406 aa32.77■■■□□ 2.84
HMGA2-202ENST00000393577 ABTB2Q8N961 1025 aa32.75■■■□□ 2.83
HMGA2-202ENST00000393577 COL14A1Q05707 1796 aaKnown RBP32.75■■■□□ 2.83
HMGA2-202ENST00000393577 TIMELESSQ9UNS1 1208 aa32.74■■■□□ 2.83
HMGA2-202ENST00000393577 AKAP12Q02952 1782 aa32.73■■■□□ 2.83
HMGA2-202ENST00000393577 BRD4O60885 1362 aaPredicted RBP32.73■■■□□ 2.83
HMGA2-202ENST00000393577 CCER1Q8TC90 406 aaPredicted RBP32.73■■■□□ 2.83
HMGA2-202ENST00000393577 GJD4Q96KN9 370 aaPredicted RBP32.73■■■□□ 2.83
HMGA2-202ENST00000393577 NRAPQ86VF7 1730 aa32.71■■■□□ 2.83
HMGA2-202ENST00000393577 GLI3P10071 1580 aa32.7■■■□□ 2.83
HMGA2-202ENST00000393577 ST20-MTHFSA0A0A6YYL1 179 aa32.7■■■□□ 2.83
HMGA2-202ENST00000393577 NRKQ7Z2Y5 1582 aa32.69■■■□□ 2.82
HMGA2-202ENST00000393577 PRDM11Q9NQV5 511 aa32.68■■■□□ 2.82
HMGA2-202ENST00000393577 SSH2Q76I76 1423 aa32.68■■■□□ 2.82
HMGA2-202ENST00000393577 BTG4Q9NY30 223 aa32.67■■■□□ 2.82
HMGA2-202ENST00000393577 KIAA0232Q92628 1395 aa32.67■■■□□ 2.82
HMGA2-202ENST00000393577 VPS72Q15906 364 aa32.66■■■□□ 2.82
HMGA2-202ENST00000393577 NLRP13Q86W25 1043 aa32.66■■■□□ 2.82
HMGA2-202ENST00000393577 USP19O94966 1318 aa32.66■■■□□ 2.82
HMGA2-202ENST00000393577 TESK2Q96S53 571 aa32.65■■■□□ 2.82
HMGA2-202ENST00000393577 ZNF692Q9BU19 519 aaPredicted RBP32.65■■■□□ 2.82
HMGA2-202ENST00000393577 USP47Q96K76 1375 aa32.65■■■□□ 2.82
HMGA2-202ENST00000393577 PIK3C2AO00443 1686 aa32.65■■■□□ 2.82
HMGA2-202ENST00000393577 ZC3H6P61129 1189 aaKnown RBP32.64■■■□□ 2.82
HMGA2-202ENST00000393577 CPSF1Q10570 1443 aaKnown RBP32.64■■■□□ 2.82
HMGA2-202ENST00000393577 CCDC9Q9Y3X0 531 aaKnown RBP32.64■■■□□ 2.82
HMGA2-202ENST00000393577 MON2Q7Z3U7 1717 aa32.63■■■□□ 2.81
HMGA2-202ENST00000393577 CHRNA2Q15822 529 aa32.62■■■□□ 2.81
HMGA2-202ENST00000393577 KTN1Q86UP2 1357 aaKnown RBP32.61■■■□□ 2.81
HMGA2-202ENST00000393577 TMC1Q8TDI8 760 aa32.61■■■□□ 2.81
HMGA2-202ENST00000393577 TTC21BQ7Z4L5 1316 aa32.6■■■□□ 2.81
HMGA2-202ENST00000393577 NLRP6P59044 892 aa32.6■■■□□ 2.81
HMGA2-202ENST00000393577 UPF1Q92900 1129 aaKnown RBP eCLIP32.6■■■□□ 2.81
HMGA2-202ENST00000393577 CD163L1Q9NR16 1453 aa32.58■■■□□ 2.81
HMGA2-202ENST00000393577 GCP02774 474 aa32.57■■■□□ 2.8
HMGA2-202ENST00000393577 PUS7Q96PZ0 661 aaKnown RBP32.57■■■□□ 2.8
HMGA2-202ENST00000393577 SLIT3O75094 1523 aa32.56■■■□□ 2.8
HMGA2-202ENST00000393577 SLC12A5Q9H2X9 1139 aa32.56■■■□□ 2.8
HMGA2-202ENST00000393577 CPDO75976 1380 aa32.56■■■□□ 2.8
HMGA2-202ENST00000393577 TTC21AQ8NDW8 1320 aa32.55■■■□□ 2.8
HMGA2-202ENST00000393577 SLC24A1O60721 1099 aa32.55■■■□□ 2.8
HMGA2-202ENST00000393577 BRWD3Q6RI45 1802 aa32.53■■■□□ 2.8
HMGA2-202ENST00000393577 HDGFL2Q7Z4V5 671 aaPredicted RBP32.52■■■□□ 2.8
HMGA2-202ENST00000393577 LMO7Q8WWI1 1683 aa32.52■■■□□ 2.8
HMGA2-202ENST00000393577 STRN4Q9NRL3 753 aa32.5■■■□□ 2.79
HMGA2-202ENST00000393577 A0A1W2PP64 1363 aa32.49■■■□□ 2.79
HMGA2-202ENST00000393577 TMF1P82094 1093 aa32.49■■■□□ 2.79
HMGA2-202ENST00000393577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.49■■■□□ 2.793e-8■■□□□ 13.7
HMGA2-202ENST00000393577 SEPT12Q8IYM1 358 aa32.49■■■□□ 2.79
HMGA2-202ENST00000393577 CAMTA1Q9Y6Y1 1673 aa32.49■■■□□ 2.79
HMGA2-202ENST00000393577 SPATA31A5Q5VU36 1347 aa32.49■■■□□ 2.79
HMGA2-202ENST00000393577 SPATA31A7Q8IWB4 1347 aa32.49■■■□□ 2.79
HMGA2-202ENST00000393577 NINLQ9Y2I6 1382 aa32.48■■■□□ 2.79
HMGA2-202ENST00000393577 TERF2IPQ9NYB0 399 aa32.48■■■□□ 2.79
HMGA2-202ENST00000393577 ZBTB7CA1YPR0 619 aa32.47■■■□□ 2.79
HMGA2-202ENST00000393577 ONECUT3O60422 494 aaPredicted RBP32.46■■■□□ 2.79
HMGA2-202ENST00000393577 FAM98CQ17RN3 349 aaKnown RBP32.46■■■□□ 2.79
HMGA2-202ENST00000393577 EDC4Q6P2E9 1401 aaKnown RBP32.45■■■□□ 2.79
HMGA2-202ENST00000393577 A0A0G2JS52 829 aa32.45■■■□□ 2.79
HMGA2-202ENST00000393577 MYT1Q01538 1121 aa32.45■■■□□ 2.79
HMGA2-202ENST00000393577 EVA1CP58658 441 aa32.44■■■□□ 2.78
HMGA2-202ENST00000393577 SOX12O15370 315 aa32.43■■■□□ 2.78
HMGA2-202ENST00000393577 USP54Q70EL1 1684 aa32.43■■■□□ 2.78
HMGA2-202ENST00000393577 NME9Q86XW9 330 aa32.42■■■□□ 2.78
HMGA2-202ENST00000393577 KCNH5Q8NCM2 988 aa32.42■■■□□ 2.78
HMGA2-202ENST00000393577 ZRANB1Q9UGI0 708 aa32.42■■■□□ 2.78
HMGA2-202ENST00000393577 SPATA31A1Q5TZJ5 1347 aa32.42■■■□□ 2.78
HMGA2-202ENST00000393577 EP400Q96L91 3159 aa32.41■■■□□ 2.78
HMGA2-202ENST00000393577 AATKQ6ZMQ8 1374 aa32.4■■■□□ 2.78
HMGA2-202ENST00000393577 USP31Q70CQ4 1352 aa32.4■■■□□ 2.78
HMGA2-202ENST00000393577 NFAT5O94916 1531 aa32.4■■■□□ 2.78
HMGA2-202ENST00000393577 COL18A1P39060 1754 aa32.4■■■□□ 2.78
HMGA2-202ENST00000393577 COL5A2P05997 1499 aaPredicted RBP32.39■■■□□ 2.78
HMGA2-202ENST00000393577 THSD7AQ9UPZ6 1657 aa32.38■■■□□ 2.77
HMGA2-202ENST00000393577 LARP1Q6PKG0 1096 aaKnown RBP32.38■■■□□ 2.77
HMGA2-202ENST00000393577 CDCA8Q53HL2 280 aa32.37■■■□□ 2.77
HMGA2-202ENST00000393577 KRT27Q7Z3Y8 459 aa32.36■■■□□ 2.77
HMGA2-202ENST00000393577 USP35Q9P2H5 1018 aa32.36■■■□□ 2.77
HMGA2-202ENST00000393577 ANKRD36BQ8N2N9 1353 aa32.35■■■□□ 2.77
HMGA2-202ENST00000393577 ARHGEF25Q86VW2 580 aa32.35■■■□□ 2.77
HMGA2-202ENST00000393577 RGPD5Q99666 1765 aa32.32■■■□□ 2.77
HMGA2-202ENST00000393577 OVOS2A0A0J9YW53 1432 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms