RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 CRBNQ96SW2 442 aa27.57■■■□□ 2
RAP1B-204ENST00000393436 AKAP12Q02952 1782 aa27.57■■■□□ 2
RAP1B-204ENST00000393436 EDC4Q6P2E9 1401 aaKnown RBP27.56■■■□□ 2
RAP1B-204ENST00000393436 PTPRUQ92729 1446 aa27.56■■■□□ 2
RAP1B-204ENST00000393436 ITSN1Q15811 1721 aa27.56■■■□□ 2
RAP1B-204ENST00000393436 C20orf194Q5TEA3 1177 aa27.56■■■□□ 2
RAP1B-204ENST00000393436 PHF23Q9BUL5 403 aaPredicted RBP27.56■■■□□ 2
RAP1B-204ENST00000393436 CCDC61Q9Y6R9 512 aa27.55■■■□□ 2
RAP1B-204ENST00000393436 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
RAP1B-204ENST00000393436 U2SURPO15042 1029 aaKnown RBP27.54■■■□□ 2
RAP1B-204ENST00000393436 PNPLA6Q8IY17 1366 aa27.53■■■□□ 2
RAP1B-204ENST00000393436 MAP2P11137 1827 aaKnown RBP27.53■■■□□ 2
RAP1B-204ENST00000393436 FBLN1P23142 703 aa27.51■■□□□ 1.99
RAP1B-204ENST00000393436 CCDC27Q2M243 656 aa27.51■■□□□ 1.99
RAP1B-204ENST00000393436 NME9Q86XW9 330 aa27.5■■□□□ 1.99
RAP1B-204ENST00000393436 THEMISQ8N1K5 641 aaPredicted RBP27.5■■□□□ 1.99
RAP1B-204ENST00000393436 TOPAZ1Q8N9V7 1692 aa27.5■■□□□ 1.99
RAP1B-204ENST00000393436 PLEKHF1Q96S99 279 aa27.49■■□□□ 1.99
RAP1B-204ENST00000393436 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
RAP1B-204ENST00000393436 DIAPH1O60610 1272 aaKnown RBP27.48■■□□□ 1.99
RAP1B-204ENST00000393436 WDR63Q8IWG1 891 aa27.48■■□□□ 1.99
RAP1B-204ENST00000393436 POLKQ9UBT6 870 aa27.48■■□□□ 1.99
RAP1B-204ENST00000393436 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.48■■□□□ 1.99
RAP1B-204ENST00000393436 ZRANB1Q9UGI0 708 aa27.48■■□□□ 1.99
RAP1B-204ENST00000393436 BCAR3O75815 825 aa27.46■■□□□ 1.99
RAP1B-204ENST00000393436 NCBP3Q53F19 620 aaKnown RBP27.46■■□□□ 1.99
RAP1B-204ENST00000393436 TBX22Q9Y458 520 aa27.46■■□□□ 1.99
RAP1B-204ENST00000393436 AMOTL2Q9Y2J4 779 aa27.46■■□□□ 1.99
RAP1B-204ENST00000393436 DIP2AQ14689 1571 aa27.45■■□□□ 1.99
RAP1B-204ENST00000393436 CEP170BQ9Y4F5 1589 aaPredicted RBP27.45■■□□□ 1.98
RAP1B-204ENST00000393436 PPM1GO15355 546 aaPredicted RBP27.43■■□□□ 1.98
RAP1B-204ENST00000393436 NRKQ7Z2Y5 1582 aa27.42■■□□□ 1.98
RAP1B-204ENST00000393436 NUTM2FA1L443 756 aa27.41■■□□□ 1.98
RAP1B-204ENST00000393436 ZNF692Q9BU19 519 aaPredicted RBP27.41■■□□□ 1.98
RAP1B-204ENST00000393436 PTCH1Q13635 1447 aa27.41■■□□□ 1.98
RAP1B-204ENST00000393436 MAPK8IP3Q9UPT6 1336 aa27.4■■□□□ 1.98
RAP1B-204ENST00000393436 TMPOP42166 694 aaKnown RBP27.4■■□□□ 1.98
RAP1B-204ENST00000393436 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
RAP1B-204ENST00000393436 COG3Q96JB2 828 aa27.4■■□□□ 1.98
RAP1B-204ENST00000393436 LRRC7Q96NW7 1537 aa27.39■■□□□ 1.98
RAP1B-204ENST00000393436 XRN1Q8IZH2 1706 aaKnown RBP27.39■■□□□ 1.98
RAP1B-204ENST00000393436 AATKQ6ZMQ8 1374 aa27.38■■□□□ 1.97
RAP1B-204ENST00000393436 ACEP12821 1306 aa27.37■■□□□ 1.97
RAP1B-204ENST00000393436 CDK12Q9NYV4 1490 aaPredicted RBP27.37■■□□□ 1.97
RAP1B-204ENST00000393436 PLEKHG3A1L390 1219 aa27.36■■□□□ 1.97
RAP1B-204ENST00000393436 TRIM35Q9UPQ4 493 aa27.36■■□□□ 1.97
RAP1B-204ENST00000393436 MYH16Q9H6N6 1097 aa27.34■■□□□ 1.97
RAP1B-204ENST00000393436 RGPD8O14715 1765 aaPredicted RBP27.34■■□□□ 1.97
RAP1B-204ENST00000393436 PNNQ9H307 717 aaKnown RBP27.34■■□□□ 1.97
RAP1B-204ENST00000393436 TTC21BQ7Z4L5 1316 aa27.34■■□□□ 1.97
RAP1B-204ENST00000393436 FCHSD2O94868 740 aa27.33■■□□□ 1.97
RAP1B-204ENST00000393436 RSPH6AQ9H0K4 717 aa27.33■■□□□ 1.96
RAP1B-204ENST00000393436 ADAMTSL3P82987 1691 aa27.32■■□□□ 1.96
RAP1B-204ENST00000393436 USP6P35125 1406 aa27.32■■□□□ 1.96
RAP1B-204ENST00000393436 RRS1Q15050 365 aaKnown RBP27.32■■□□□ 1.96
RAP1B-204ENST00000393436 ZNF142P52746 1687 aaPredicted RBP27.31■■□□□ 1.96
RAP1B-204ENST00000393436 RARSP54136 660 aaKnown RBP27.31■■□□□ 1.96
RAP1B-204ENST00000393436 RIPK4P57078 832 aa27.31■■□□□ 1.96
RAP1B-204ENST00000393436 PRKAR2BP31323 418 aa27.3■■□□□ 1.96
RAP1B-204ENST00000393436 IL13P35225 146 aa27.3■■□□□ 1.96
RAP1B-204ENST00000393436 FANCIQ9NVI1 1328 aa27.28■■□□□ 1.96
RAP1B-204ENST00000393436 TSR2Q969E8 191 aaKnown RBP27.28■■□□□ 1.96
RAP1B-204ENST00000393436 OVOS2A0A0J9YW53 1432 aa27.28■■□□□ 1.96
RAP1B-204ENST00000393436 OVOS2Q6IE36 1432 aa27.28■■□□□ 1.96
RAP1B-204ENST00000393436 HMOX1P09601 288 aa27.28■■□□□ 1.96
RAP1B-204ENST00000393436 KCNA6P17658 529 aa27.28■■□□□ 1.96
RAP1B-204ENST00000393436 NALCNQ8IZF0 1738 aa27.27■■□□□ 1.96
RAP1B-204ENST00000393436 KDM2BQ8NHM5 1336 aa27.26■■□□□ 1.96
RAP1B-204ENST00000393436 CANXP27824 592 aaKnown RBP27.26■■□□□ 1.95
RAP1B-204ENST00000393436 PDE3AQ14432 1141 aa27.26■■□□□ 1.95
RAP1B-204ENST00000393436 PMFBP1Q8TBY8 1022 aa27.26■■□□□ 1.95
RAP1B-204ENST00000393436 SSH2Q76I76 1423 aa27.26■■□□□ 1.95
RAP1B-204ENST00000393436 PIK3R4Q99570 1358 aa27.25■■□□□ 1.95
RAP1B-204ENST00000393436 FRAT1Q92837 279 aaPredicted RBP27.24■■□□□ 1.95
RAP1B-204ENST00000393436 IL16Q14005 1332 aa27.24■■□□□ 1.95
RAP1B-204ENST00000393436 PHACTR3Q96KR7 559 aa27.23■■□□□ 1.95
RAP1B-204ENST00000393436 BCL2L13Q9BXK5 485 aa27.23■■□□□ 1.95
RAP1B-204ENST00000393436 PANK1Q8TE04 598 aa27.23■■□□□ 1.95
RAP1B-204ENST00000393436 CHD2O14647 1828 aaKnown RBP27.22■■□□□ 1.95
RAP1B-204ENST00000393436 TCERG1O14776 1098 aaKnown RBP27.21■■□□□ 1.95
RAP1B-204ENST00000393436 NEFMP07197 916 aa27.21■■□□□ 1.95
RAP1B-204ENST00000393436 FMN2Q9NZ56 1722 aa27.21■■□□□ 1.95
RAP1B-204ENST00000393436 EXOSC9Q06265 439 aaKnown RBP27.21■■□□□ 1.95
RAP1B-204ENST00000393436 ANKLE2Q86XL3 938 aa27.21■■□□□ 1.95
RAP1B-204ENST00000393436 PEAK1Q9H792 1746 aa27.2■■□□□ 1.95
RAP1B-204ENST00000393436 CENPQQ7L2Z9 268 aaPredicted RBP27.2■■□□□ 1.94
RAP1B-204ENST00000393436 SKAP1Q86WV1 359 aa27.2■■□□□ 1.94
RAP1B-204ENST00000393436 NFE2L2Q16236 605 aa27.19■■□□□ 1.94
RAP1B-204ENST00000393436 COG6Q9Y2V7 657 aa27.19■■□□□ 1.94
RAP1B-204ENST00000393436 SETD1BQ9UPS6 1966 aaKnown RBP27.18■■□□□ 1.94
RAP1B-204ENST00000393436 CT47B1P0C2W7 299 aaPredicted RBP27.17■■□□□ 1.94
RAP1B-204ENST00000393436 NGDNQ8NEJ9 315 aaKnown RBP27.17■■□□□ 1.94
RAP1B-204ENST00000393436 TNNQ9UQP3 1299 aa27.17■■□□□ 1.94
RAP1B-204ENST00000393436 DLG5Q8TDM6 1919 aa27.17■■□□□ 1.94
RAP1B-204ENST00000393436 USP31Q70CQ4 1352 aa27.17■■□□□ 1.94
RAP1B-204ENST00000393436 ANKARQ7Z5J8 1434 aa27.17■■□□□ 1.94
RAP1B-204ENST00000393436 TTC21AQ8NDW8 1320 aa27.17■■□□□ 1.94
RAP1B-204ENST00000393436 PIK3C2AO00443 1686 aa27.15■■□□□ 1.94
RAP1B-204ENST00000393436 RLBP1P12271 317 aa27.14■■□□□ 1.93
RAP1B-204ENST00000393436 EIF4A2Q14240 407 aaKnown RBP27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms