RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 KRT76Q01546 638 aa5.16□□□□□ -1.58
RNU6-239P-201ENST00000390990 ZFAND3Q9H8U3 227 aa5.16□□□□□ -1.58
RNU6-239P-201ENST00000390990 FAM217BQ9NTX9 383 aaPredicted RBP5.16□□□□□ -1.58
RNU6-239P-201ENST00000390990 KCNH2Q12809 1159 aa5.15□□□□□ -1.59
RNU6-239P-201ENST00000390990 PTPRNQ16849 979 aa5.15□□□□□ -1.59
RNU6-239P-201ENST00000390990 C6orf118Q5T5N4 469 aa5.15□□□□□ -1.59
RNU6-239P-201ENST00000390990 NUTM1Q86Y26 1132 aa5.15□□□□□ -1.59
RNU6-239P-201ENST00000390990 GPR161Q8N6U8 529 aaKnown RBP5.15□□□□□ -1.59
RNU6-239P-201ENST00000390990 ADAMTS8Q9UP79 889 aa5.15□□□□□ -1.59
RNU6-239P-201ENST00000390990 ZIC2O95409 532 aaPredicted RBP5.14□□□□□ -1.59
RNU6-239P-201ENST00000390990 ITPKCQ96DU7 683 aa5.14□□□□□ -1.59
RNU6-239P-201ENST00000390990 NR3C2P08235 984 aa5.13□□□□□ -1.59
RNU6-239P-201ENST00000390990 GPCPD1Q9NPB8 672 aa5.13□□□□□ -1.59
RNU6-239P-201ENST00000390990 NDUFV2P19404 249 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 ARID5BQ14865 1188 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 PRR7Q8TB68 274 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 CCDC102AQ96A19 550 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 CNTNAP3BQ96NU0 1288 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 CDK15Q96Q40 435 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 CNTNAP3Q9BZ76 1288 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 DNMT3LQ9UJW3 386 aa5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 MINK1Q8N4C8 1332 aaPredicted RBP5.12□□□□□ -1.59
RNU6-239P-201ENST00000390990 BMP2P12643 396 aa5.11□□□□□ -1.59
RNU6-239P-201ENST00000390990 CLCN1P35523 988 aa5.11□□□□□ -1.59
RNU6-239P-201ENST00000390990 GRM5P41594 1212 aa5.11□□□□□ -1.59
RNU6-239P-201ENST00000390990 FAM174AQ8TBP5 190 aa5.11□□□□□ -1.59
RNU6-239P-201ENST00000390990 FOXJ1Q92949 421 aa5.11□□□□□ -1.59
RNU6-239P-201ENST00000390990 MOXD2PA6NHM9 499 aa5.1□□□□□ -1.59
RNU6-239P-201ENST00000390990 SOS2Q07890 1332 aaPredicted RBP5.1□□□□□ -1.59
RNU6-239P-201ENST00000390990 ZNF385CQ66K41 422 aaPredicted RBP5.1□□□□□ -1.59
RNU6-239P-201ENST00000390990 SPIRE2Q8WWL2 714 aa5.1□□□□□ -1.59
RNU6-239P-201ENST00000390990 C4orf48Q5BLP8 95 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 RNFT1Q5M7Z0 435 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 DESI1Q6ICB0 168 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 GPAT2Q6NUI2 795 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 LINC00528Q8N1L1 170 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 MEIOBQ8N635 442 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 WHAMMQ8TF30 809 aa5.09□□□□□ -1.59
RNU6-239P-201ENST00000390990 RNF225M0QZC1 329 aaPredicted RBP5.08□□□□□ -1.6
RNU6-239P-201ENST00000390990 CTHP32929 405 aa5.08□□□□□ -1.6
RNU6-239P-201ENST00000390990 NR5A1Q13285 461 aa5.08□□□□□ -1.6
RNU6-239P-201ENST00000390990 LYPD8Q6UX82 237 aa5.08□□□□□ -1.6
RNU6-239P-201ENST00000390990 COL25A1Q9BXS0 654 aaPredicted RBP5.08□□□□□ -1.6
RNU6-239P-201ENST00000390990 ARHGEF15O94989 841 aa5.07□□□□□ -1.6
RNU6-239P-201ENST00000390990 UPP2O95045 317 aa5.07□□□□□ -1.6
RNU6-239P-201ENST00000390990 SSTR3P32745 418 aaPredicted RBP5.07□□□□□ -1.6
RNU6-239P-201ENST00000390990 IRS1P35568 1242 aa5.07□□□□□ -1.6
RNU6-239P-201ENST00000390990 MTMR2Q13614 643 aa5.07□□□□□ -1.6
RNU6-239P-201ENST00000390990 MAP10Q9P2G4 905 aa5.07□□□□□ -1.6
RNU6-239P-201ENST00000390990 SPTLC1O15269 473 aa5.06□□□□□ -1.6
RNU6-239P-201ENST00000390990 PTSQ03393 145 aa5.06□□□□□ -1.6
RNU6-239P-201ENST00000390990 SVOPQ8N4V2 548 aa5.06□□□□□ -1.6
RNU6-239P-201ENST00000390990 KRI1Q8N9T8 703 aaKnown RBP5.06□□□□□ -1.6
RNU6-239P-201ENST00000390990 DNMT3AQ9Y6K1 912 aaPredicted RBP5.06□□□□□ -1.6
RNU6-239P-201ENST00000390990 SPDYE5A6NIY4 337 aa5.05□□□□□ -1.6
RNU6-239P-201ENST00000390990 FIGNL2A6NMB9 653 aa5.05□□□□□ -1.6
RNU6-239P-201ENST00000390990 F12P00748 615 aaPredicted RBP5.05□□□□□ -1.6
RNU6-239P-201ENST00000390990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.05□□□□□ -1.6
RNU6-239P-201ENST00000390990 XP32Q5T750 250 aa5.05□□□□□ -1.6
RNU6-239P-201ENST00000390990 NANOS1Q8WY41 292 aaKnown RBP5.05□□□□□ -1.6
RNU6-239P-201ENST00000390990 TTLL8A6PVC2 850 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 CFAP99D6REC4 459 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 IGHA1P01876 353 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 SLURP2P0DP57 97 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 AGERQ15109 404 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 CCDC155Q8N6L0 562 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 TSEN34Q9BSV6 310 aaKnown RBP5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 PCDHB15Q9Y5E8 787 aa5.04□□□□□ -1.6
RNU6-239P-201ENST00000390990 BPHLQ86WA6 291 aaPredicted RBP5.03□□□□□ -1.6
RNU6-239P-201ENST00000390990 VWA5B2Q8N398 1253 aa5.03□□□□□ -1.6
RNU6-239P-201ENST00000390990 PER1O15534 1290 aaPredicted RBP5.02□□□□□ -1.61
RNU6-239P-201ENST00000390990 FSHRP23945 695 aa5.02□□□□□ -1.61
RNU6-239P-201ENST00000390990 SLC35F4A4IF30 521 aa5.01□□□□□ -1.61
RNU6-239P-201ENST00000390990 MARSP56192 900 aaKnown RBP5.01□□□□□ -1.61
RNU6-239P-201ENST00000390990 CBLBQ13191 982 aa5.01□□□□□ -1.61
RNU6-239P-201ENST00000390990 KANK3Q6NY19 840 aa5.01□□□□□ -1.61
RNU6-239P-201ENST00000390990 RSBN1LQ6PCB5 846 aaPredicted RBP5.01□□□□□ -1.61
RNU6-239P-201ENST00000390990 C1QTNF2Q9BXJ5 285 aa5.01□□□□□ -1.61
RNU6-239P-201ENST00000390990 ITGA6P23229 1130 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 HRCP23327 699 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 FOXK2Q01167 660 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 LYPD4Q6UWN0 246 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 VASH1Q7L8A9 365 aaPredicted RBP5□□□□□ -1.61
RNU6-239P-201ENST00000390990 SH3RF1Q7Z6J0 888 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 BEGAINQ9BUH8 593 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 TBC1D2Q9BYX2 928 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 MAP4K5Q9Y4K4 846 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 EMILIN1Q9Y6C2 1016 aa5□□□□□ -1.61
RNU6-239P-201ENST00000390990 CDC14CA4D256 554 aa4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 SPINT1O43278 529 aa4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 GJA5P36382 358 aa4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 SV2AQ7L0J3 742 aa4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 CCDC116Q8IYX3 515 aa4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 CABLES1Q8TDN4 633 aa4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 SCARF2Q96GP6 870 aaPredicted RBP4.99□□□□□ -1.61
RNU6-239P-201ENST00000390990 ADAM23O75077 832 aa4.98□□□□□ -1.61
RNU6-239P-201ENST00000390990 ITGB2P05107 769 aa4.98□□□□□ -1.61
RNU6-239P-201ENST00000390990 TTLL12Q14166 644 aaPredicted RBP4.98□□□□□ -1.61
RNU6-239P-201ENST00000390990 PPP1R26Q5T8A7 1209 aaPredicted RBP4.98□□□□□ -1.61
RNU6-239P-201ENST00000390990 Q6ZVU0 165 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms