RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 CTHP32929 405 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 MMP16P51512 607 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 PTPRNQ16849 979 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 TJAP1Q5JTD0 557 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 DESI1Q6ICB0 168 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 TBC1D9Q6ZT07 1266 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 NUDT12Q9BQG2 462 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 PRR14Q9BWN1 585 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 FKBPLQ9UIM3 349 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 SERPINA10Q9UK55 444 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 PALM3A6NDB9 673 aaPredicted RBP3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 PPEF1O14829 653 aaPredicted RBP3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 SRPK2P78362 688 aaKnown RBP3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 LINC01559Q495D7 138 aa3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 CDCA8Q53HL2 280 aa3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 PLA2G2CQ5R387 149 aa3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 PPP1R12CQ9BZL4 782 aa3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 SALL2Q9Y467 1007 aaPredicted RBP3.27□□□□□ -1.89
TRAJ41-201ENST00000390496 KCNH2Q12809 1159 aa3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 NR1H3Q13133 447 aa3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 C4orf48Q5BLP8 95 aa3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 CCDC24Q8N4L8 307 aa3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 FOXJ1Q92949 421 aa3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 UNC93B1Q9H1C4 597 aa3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 MAFBQ9Y5Q3 323 aaPredicted RBP3.26□□□□□ -1.89
TRAJ41-201ENST00000390496 ZBBXA8MT70 800 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 LMOD1P29536 600 aaPredicted RBP3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 WASHC4Q2M389 1173 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 TSGA10IPQ3SY00 556 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 WWC1Q8IX03 1113 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 DEPDC4Q8N2C3 294 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 CARD14Q9BXL6 1004 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 SLC6A16Q9GZN6 736 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 PRM3Q9NNZ6 103 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 PODXL2Q9NZ53 605 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 TFIP11Q9UBB9 837 aaKnown RBP3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 MYT1LQ9UL68 1186 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 ZMIZ1Q9ULJ6 1067 aa3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 FCF1Q9Y324 198 aaKnown RBP3.25□□□□□ -1.89
TRAJ41-201ENST00000390496 SH3BP5LQ7L8J4 393 aa3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 ADAM32Q8TC27 787 aa3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 EMID1Q96A84 441 aaPredicted RBP3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 PBXIP1Q96AQ6 731 aa3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 IL21Q9HBE4 155 aa3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 EVA1BQ9NVM1 165 aa3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 PCDHB9Q9Y5E1 797 aa3.24□□□□□ -1.89
TRAJ41-201ENST00000390496 MAGEB6P1A0A0J9YX57 407 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 USP17L3A6NCW0 530 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 USP17L4A6NCW7 530 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 USP17L5A8MUK1 530 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 ATP9BO43861 1147 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 SEMA3FQ13275 785 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 USP17L2Q6R6M4 530 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 USP17L1Q7RTZ2 530 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 SH3RF1Q7Z6J0 888 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 STK32AQ8WU08 396 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 BAP1Q92560 729 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 CCDC85AQ96PX6 553 aaPredicted RBP3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 SLAIN2Q9P270 581 aa3.23□□□□□ -1.89
TRAJ41-201ENST00000390496 ZC3H4Q9UPT8 1303 aaKnown RBP3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 TMEM88BA6NKF7 163 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 RNF223E7ERA6 249 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 SKIP12755 728 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 SKOR1P84550 965 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 ERFEQ4G0M1 354 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 CRTC2Q53ET0 693 aaPredicted RBP3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 KANK4Q5T7N3 995 aaPredicted RBP3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 SPNS2Q8IVW8 549 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 RNF166Q96A37 237 aaPredicted RBP3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 ARHGAP9Q9BRR9 750 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 TRAIPQ9BWF2 469 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 KIAA1024Q9UPX6 916 aa3.22□□□□□ -1.89
TRAJ41-201ENST00000390496 GIGYF1O75420 1035 aaPredicted RBP3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 STAU1O95793 577 aaKnown RBP3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 ITGBL1O95965 494 aaPredicted RBP3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 PDIA4P13667 645 aaKnown RBP3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 SOX11P35716 441 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 SH3BP2P78314 561 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 EIF4G2P78344 907 aaKnown RBP eCLIP3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 NCOA4Q13772 614 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 NBPF14Q5TI25 921 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 PDXDC2PQ6P474 469 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 TRAF7Q6Q0C0 670 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 PHTF2Q8N3S3 785 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 ZNF511Q8NB15 262 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 CDCA7Q9BWT1 371 aaPredicted RBP3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 C1QTNF2Q9BXJ5 285 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 CEP126Q9P2H0 1117 aa3.21□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L15C9J2P7 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L10C9JJH3 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L13C9JLJ4 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L12C9JPN9 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L11C9JVI0 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L21D6R901 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L18D6R9N7 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L22D6RA61 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L17D6RBQ6 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L19D6RCP7 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 USP17L20D6RJB6 530 aa3.2□□□□□ -1.9
TRAJ41-201ENST00000390496 LGR5O75473 907 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms