RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 NCKAP5LQ9HCH0 1330 aa23.87■■□□□ 1.41
ACTN4-202ENST00000390009 CEP170BQ9Y4F5 1589 aaPredicted RBP23.87■■□□□ 1.41
ACTN4-202ENST00000390009 TBX22Q9Y458 520 aa23.87■■□□□ 1.41
ACTN4-202ENST00000390009 NKTRP30414 1462 aaKnown RBP23.86■■□□□ 1.41
ACTN4-202ENST00000390009 PRR36Q9H6K5 1346 aa23.86■■□□□ 1.41
ACTN4-202ENST00000390009 EXOC6Q8TAG9 804 aa23.86■■□□□ 1.41
ACTN4-202ENST00000390009 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
ACTN4-202ENST00000390009 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
ACTN4-202ENST00000390009 PLIN1O60240 522 aa23.86■■□□□ 1.41
ACTN4-202ENST00000390009 TOPAZ1Q8N9V7 1692 aa23.85■■□□□ 1.41
ACTN4-202ENST00000390009 RRP7AQ9Y3A4 280 aaKnown RBP23.84■■□□□ 1.41
ACTN4-202ENST00000390009 PNPLA6Q8IY17 1366 aa23.84■■□□□ 1.41
ACTN4-202ENST00000390009 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
ACTN4-202ENST00000390009 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
ACTN4-202ENST00000390009 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.4
ACTN4-202ENST00000390009 PTCH1Q13635 1447 aa23.82■■□□□ 1.4
ACTN4-202ENST00000390009 U2SURPO15042 1029 aaKnown RBP23.81■■□□□ 1.4
ACTN4-202ENST00000390009 NME9Q86XW9 330 aa23.8■■□□□ 1.4
ACTN4-202ENST00000390009 ADAMTSL3P82987 1691 aa23.8■■□□□ 1.4
ACTN4-202ENST00000390009 DIAPH1O60610 1272 aaKnown RBP23.8■■□□□ 1.4
ACTN4-202ENST00000390009 CCDC27Q2M243 656 aa23.8■■□□□ 1.4
ACTN4-202ENST00000390009 NCBP3Q53F19 620 aaKnown RBP23.8■■□□□ 1.4
ACTN4-202ENST00000390009 ZNF692Q9BU19 519 aaPredicted RBP23.8■■□□□ 1.4
ACTN4-202ENST00000390009 XRN1Q8IZH2 1706 aaKnown RBP23.79■■□□□ 1.4
ACTN4-202ENST00000390009 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
ACTN4-202ENST00000390009 ZNF142P52746 1687 aaPredicted RBP23.78■■□□□ 1.4
ACTN4-202ENST00000390009 FBLN1P23142 703 aa23.77■■□□□ 1.4
ACTN4-202ENST00000390009 PLEKHF1Q96S99 279 aa23.77■■□□□ 1.4
ACTN4-202ENST00000390009 NRKQ7Z2Y5 1582 aa23.77■■□□□ 1.4
ACTN4-202ENST00000390009 WDR63Q8IWG1 891 aa23.77■■□□□ 1.4
ACTN4-202ENST00000390009 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
ACTN4-202ENST00000390009 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
ACTN4-202ENST00000390009 CRBNQ96SW2 442 aa23.75■■□□□ 1.39
ACTN4-202ENST00000390009 PPM1GO15355 546 aaPredicted RBP23.74■■□□□ 1.39
ACTN4-202ENST00000390009 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.74■■□□□ 1.39
ACTN4-202ENST00000390009 COG3Q96JB2 828 aa23.74■■□□□ 1.39
ACTN4-202ENST00000390009 AATKQ6ZMQ8 1374 aa23.74■■□□□ 1.39
ACTN4-202ENST00000390009 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
ACTN4-202ENST00000390009 C20orf194Q5TEA3 1177 aa23.74■■□□□ 1.39
ACTN4-202ENST00000390009 RBM19Q9Y4C8 960 aaKnown RBP23.73■■□□□ 1.39
ACTN4-202ENST00000390009 ACEP12821 1306 aa23.73■■□□□ 1.39
ACTN4-202ENST00000390009 SETD1BQ9UPS6 1966 aaKnown RBP23.73■■□□□ 1.39
ACTN4-202ENST00000390009 MAPK8IP3Q9UPT6 1336 aa23.72■■□□□ 1.39
ACTN4-202ENST00000390009 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
ACTN4-202ENST00000390009 CDK12Q9NYV4 1490 aaPredicted RBP23.71■■□□□ 1.39
ACTN4-202ENST00000390009 PIK3R4Q99570 1358 aa23.71■■□□□ 1.39
ACTN4-202ENST00000390009 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
ACTN4-202ENST00000390009 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
ACTN4-202ENST00000390009 PNNQ9H307 717 aaKnown RBP23.7■■□□□ 1.38
ACTN4-202ENST00000390009 USP6P35125 1406 aa23.7■■□□□ 1.38
ACTN4-202ENST00000390009 TMPOP42166 694 aaKnown RBP23.69■■□□□ 1.38
ACTN4-202ENST00000390009 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
ACTN4-202ENST00000390009 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
ACTN4-202ENST00000390009 BCAR3O75815 825 aa23.68■■□□□ 1.38
ACTN4-202ENST00000390009 KCNA6P17658 529 aa23.68■■□□□ 1.38
ACTN4-202ENST00000390009 FCHSD2O94868 740 aa23.67■■□□□ 1.38
ACTN4-202ENST00000390009 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
ACTN4-202ENST00000390009 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
ACTN4-202ENST00000390009 MYH16Q9H6N6 1097 aa23.65■■□□□ 1.38
ACTN4-202ENST00000390009 NALCNQ8IZF0 1738 aa23.65■■□□□ 1.38
ACTN4-202ENST00000390009 RRS1Q15050 365 aaKnown RBP23.65■■□□□ 1.38
ACTN4-202ENST00000390009 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
ACTN4-202ENST00000390009 OVOS2A0A0J9YW53 1432 aa23.64■■□□□ 1.38
ACTN4-202ENST00000390009 OVOS2Q6IE36 1432 aa23.64■■□□□ 1.38
ACTN4-202ENST00000390009 RSPH6AQ9H0K4 717 aa23.64■■□□□ 1.37
ACTN4-202ENST00000390009 IL13P35225 146 aa23.63■■□□□ 1.37
ACTN4-202ENST00000390009 SSH2Q76I76 1423 aa23.63■■□□□ 1.37
ACTN4-202ENST00000390009 FMN2Q9NZ56 1722 aa23.62■■□□□ 1.37
ACTN4-202ENST00000390009 PRKAR2BP31323 418 aa23.62■■□□□ 1.37
ACTN4-202ENST00000390009 PMFBP1Q8TBY8 1022 aa23.62■■□□□ 1.37
ACTN4-202ENST00000390009 RIPK4P57078 832 aa23.61■■□□□ 1.37
ACTN4-202ENST00000390009 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
ACTN4-202ENST00000390009 NEFMP07197 916 aa23.59■■□□□ 1.37
ACTN4-202ENST00000390009 HMOX1P09601 288 aa23.59■■□□□ 1.37
ACTN4-202ENST00000390009 RARSP54136 660 aaKnown RBP23.59■■□□□ 1.37
ACTN4-202ENST00000390009 NGDNQ8NEJ9 315 aaKnown RBP23.58■■□□□ 1.37
ACTN4-202ENST00000390009 TTC21AQ8NDW8 1320 aa23.58■■□□□ 1.37
ACTN4-202ENST00000390009 IL16Q14005 1332 aa23.57■■□□□ 1.36
ACTN4-202ENST00000390009 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
ACTN4-202ENST00000390009 USP31Q70CQ4 1352 aa23.56■■□□□ 1.36
ACTN4-202ENST00000390009 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
ACTN4-202ENST00000390009 PDE3AQ14432 1141 aa23.55■■□□□ 1.36
ACTN4-202ENST00000390009 PEAK1Q9H792 1746 aa23.54■■□□□ 1.36
ACTN4-202ENST00000390009 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
ACTN4-202ENST00000390009 PHACTR3Q96KR7 559 aa23.54■■□□□ 1.36
ACTN4-202ENST00000390009 PIK3C2AO00443 1686 aa23.53■■□□□ 1.36
ACTN4-202ENST00000390009 NFE2L2Q16236 605 aa23.53■■□□□ 1.36
ACTN4-202ENST00000390009 DLG5Q8TDM6 1919 aa23.52■■□□□ 1.36
ACTN4-202ENST00000390009 CT47B1P0C2W7 299 aaPredicted RBP23.52■■□□□ 1.36
ACTN4-202ENST00000390009 FRAT1Q92837 279 aaPredicted RBP23.51■■□□□ 1.35
ACTN4-202ENST00000390009 NPHP4O75161 1426 aaPredicted RBP23.51■■□□□ 1.35
ACTN4-202ENST00000390009 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
ACTN4-202ENST00000390009 BCL2L13Q9BXK5 485 aa23.5■■□□□ 1.35
ACTN4-202ENST00000390009 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
ACTN4-202ENST00000390009 EIF4A2Q14240 407 aaKnown RBP23.49■■□□□ 1.35
ACTN4-202ENST00000390009 PANK1Q8TE04 598 aa23.48■■□□□ 1.35
ACTN4-202ENST00000390009 SOX12O15370 315 aa23.47■■□□□ 1.35
ACTN4-202ENST00000390009 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
ACTN4-202ENST00000390009 CENPQQ7L2Z9 268 aaPredicted RBP23.46■■□□□ 1.35
ACTN4-202ENST00000390009 MARF1Q9Y4F3 1742 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms