RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 CWC15Q9P013 229 aaKnown RBP10.38□□□□□ -0.75
PKP4-202ENST00000389759 SYNE3Q6ZMZ3 975 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 ANKRD20A12PQ8NF67 263 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 TNPO1Q92973 898 aaKnown RBP10.38□□□□□ -0.75
PKP4-202ENST00000389759 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
PKP4-202ENST00000389759 SURF6O75683 361 aaKnown RBP10.38□□□□□ -0.75
PKP4-202ENST00000389759 RARSP54136 660 aaKnown RBP10.38□□□□□ -0.75
PKP4-202ENST00000389759 AKAP17AQ02040 695 aaKnown RBP10.37□□□□□ -0.75
PKP4-202ENST00000389759 CLASRPQ8N2M8 674 aaKnown RBP10.37□□□□□ -0.75
PKP4-202ENST00000389759 PLEKHH2Q8IVE3 1493 aa10.37□□□□□ -0.75
PKP4-202ENST00000389759 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
PKP4-202ENST00000389759 PDCL2Q8N4E4 241 aa10.37□□□□□ -0.75
PKP4-202ENST00000389759 LRPPRCP42704 1394 aaKnown RBP10.37□□□□□ -0.75
PKP4-202ENST00000389759 FOSBP53539 338 aa10.37□□□□□ -0.75
PKP4-202ENST00000389759 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
PKP4-202ENST00000389759 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
PKP4-202ENST00000389759 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
PKP4-202ENST00000389759 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.75
PKP4-202ENST00000389759 KRT85P78386 507 aa10.36□□□□□ -0.75
PKP4-202ENST00000389759 DDX58O95786 925 aaKnown RBP10.35□□□□□ -0.75
PKP4-202ENST00000389759 TRDNQ13061 729 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 NKTRP30414 1462 aaKnown RBP10.35□□□□□ -0.75
PKP4-202ENST00000389759 CLSTN1O94985 981 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 GNAI2P04899 355 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 C1orf141Q5JVX7 400 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 FMNL2Q96PY5 1086 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 TNMDQ9H2S6 317 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 DAPK1P53355 1430 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 SSFA2P28290 1259 aa10.35□□□□□ -0.75
PKP4-202ENST00000389759 SMC2O95347 1197 aa10.34□□□□□ -0.75
PKP4-202ENST00000389759 AEBP1Q8IUX7 1158 aa10.34□□□□□ -0.75
PKP4-202ENST00000389759 TOP2BQ02880 1626 aa10.34□□□□□ -0.75
PKP4-202ENST00000389759 C9orf84Q5VXU9 1444 aa10.34□□□□□ -0.75
PKP4-202ENST00000389759 CCP110O43303 1012 aa10.34□□□□□ -0.75
PKP4-202ENST00000389759 OLFM4Q6UX06 510 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 PDILTQ8N807 584 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 EID1Q9Y6B2 187 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 FSD1Q9BTV5 496 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 PANK2Q9BZ23 570 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 CYP46A1Q9Y6A2 500 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 IGHDP01880 384 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 MCM5P33992 734 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 RUFY1Q96T51 708 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 LRRCC1Q9C099 1032 aa10.33□□□□□ -0.76
PKP4-202ENST00000389759 NESP48681 1621 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 RPAP2Q8IXW5 612 aaPredicted RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 SSH1Q8WYL5 1049 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 CBX1P83916 185 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 AK7Q96M32 723 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 SLC4A2P04920 1241 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 APPP05067 770 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 DHX8Q14562 1220 aaKnown RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 SAFBQ15424 915 aaKnown RBP eCLIP10.32□□□□□ -0.76
PKP4-202ENST00000389759 KLHL40Q2TBA0 621 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 CCDC30Q5VVM6 783 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 LARP1BQ659C4 914 aaKnown RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 RALYLQ86SE5 291 aaKnown RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 TMPOP42166 694 aaKnown RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 ERCC4Q92889 916 aaPredicted RBP10.32□□□□□ -0.76
PKP4-202ENST00000389759 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
PKP4-202ENST00000389759 TAF3Q5VWG9 929 aa10.31□□□□□ -0.76
PKP4-202ENST00000389759 LEKR1Q6ZMV7 388 aa10.31□□□□□ -0.76
PKP4-202ENST00000389759 CCT4P50991 539 aaKnown RBP10.31□□□□□ -0.76
PKP4-202ENST00000389759 HIP1O00291 1037 aa10.31□□□□□ -0.76
PKP4-202ENST00000389759 BAG4O95429 457 aaKnown RBP10.31□□□□□ -0.76
PKP4-202ENST00000389759 CEBPZQ03701 1054 aaKnown RBP10.31□□□□□ -0.76
PKP4-202ENST00000389759 FILIP1Q7Z7B0 1213 aa10.31□□□□□ -0.76
PKP4-202ENST00000389759 CEP89Q96ST8 783 aa10.31□□□□□ -0.76
PKP4-202ENST00000389759 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
PKP4-202ENST00000389759 MAPKBP1O60336 1514 aa10.3□□□□□ -0.76
PKP4-202ENST00000389759 RPRD2Q5VT52 1461 aaKnown RBP10.3□□□□□ -0.76
PKP4-202ENST00000389759 DYNC1I1O14576 645 aa10.3□□□□□ -0.76
PKP4-202ENST00000389759 NFXL1Q6ZNB6 911 aa10.3□□□□□ -0.76
PKP4-202ENST00000389759 ZNF396Q96N95 335 aaPredicted RBP10.3□□□□□ -0.76
PKP4-202ENST00000389759 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
PKP4-202ENST00000389759 MARCH6O60337 910 aa10.3□□□□□ -0.76
PKP4-202ENST00000389759 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
PKP4-202ENST00000389759 AFAP1Q8N556 730 aa10.3□□□□□ -0.76
PKP4-202ENST00000389759 CCDC47Q96A33 483 aaKnown RBP10.3□□□□□ -0.76
PKP4-202ENST00000389759 H0YHG0 523 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 PDE4CQ08493 712 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 STK38Q15208 465 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 MAP3K11Q16584 847 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 UPF3BQ9BZI7 483 aaKnown RBP10.29□□□□□ -0.76
PKP4-202ENST00000389759 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 BMP2KLQ5H9B9 411 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 SPATA32Q96LK8 384 aa10.29□□□□□ -0.76
PKP4-202ENST00000389759 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
PKP4-202ENST00000389759 PDIA4P13667 645 aaKnown RBP10.28□□□□□ -0.76
PKP4-202ENST00000389759 ZSCAN31Q96LW9 406 aaPredicted RBP10.28□□□□□ -0.76
PKP4-202ENST00000389759 FCHSD2O94868 740 aa10.28□□□□□ -0.76
PKP4-202ENST00000389759 ME1P48163 572 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms