RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PRAG1Q86YV5 1406 aa16.21■□□□□ 0.19
PTPRN2-202ENST00000389416 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
PTPRN2-202ENST00000389416 TOMM22Q9NS69 142 aa16.21■□□□□ 0.19
PTPRN2-202ENST00000389416 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.18
PTPRN2-202ENST00000389416 FAM161AQ3B820 660 aa16.21■□□□□ 0.18
PTPRN2-202ENST00000389416 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.18
PTPRN2-202ENST00000389416 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.18
PTPRN2-202ENST00000389416 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
PTPRN2-202ENST00000389416 MCM10Q7L590 875 aa16.2■□□□□ 0.18
PTPRN2-202ENST00000389416 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
PTPRN2-202ENST00000389416 PLCB2Q00722 1185 aa16.2■□□□□ 0.18
PTPRN2-202ENST00000389416 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
PTPRN2-202ENST00000389416 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
PTPRN2-202ENST00000389416 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
PTPRN2-202ENST00000389416 PZPP20742 1482 aa16.18■□□□□ 0.18
PTPRN2-202ENST00000389416 DNMT1P26358 1616 aaKnown RBP16.18■□□□□ 0.18
PTPRN2-202ENST00000389416 DIAPH3Q9NSV4 1193 aa16.17■□□□□ 0.18
PTPRN2-202ENST00000389416 GNL2Q13823 731 aaKnown RBP16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 TESK2Q96S53 571 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 ATP7AQ04656 1500 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 FYB1O15117 783 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 GNAI3P08754 354 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 MYL6BP14649 208 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
PTPRN2-202ENST00000389416 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 ATP10AO60312 1499 aa16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 KCNA6P17658 529 aa16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 NEUROD6Q96NK8 337 aa16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
PTPRN2-202ENST00000389416 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
PTPRN2-202ENST00000389416 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
PTPRN2-202ENST00000389416 CHRNA2Q15822 529 aa16.14■□□□□ 0.17
PTPRN2-202ENST00000389416 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
PTPRN2-202ENST00000389416 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
PTPRN2-202ENST00000389416 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 SLC4A3P48751 1232 aa16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 HSP90AB4PQ58FF6 505 aa16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
PTPRN2-202ENST00000389416 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
PTPRN2-202ENST00000389416 VPS37DQ86XT2 251 aa16.12■□□□□ 0.17
PTPRN2-202ENST00000389416 TTC21BQ7Z4L5 1316 aa16.11■□□□□ 0.17
PTPRN2-202ENST00000389416 ST18O60284 1047 aa16.11■□□□□ 0.17
PTPRN2-202ENST00000389416 ABCA8O94911 1581 aa16.11■□□□□ 0.17
PTPRN2-202ENST00000389416 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
PTPRN2-202ENST00000389416 AAMPQ13685 434 aa16.1■□□□□ 0.17
PTPRN2-202ENST00000389416 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
PTPRN2-202ENST00000389416 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
PTPRN2-202ENST00000389416 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
PTPRN2-202ENST00000389416 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
PTPRN2-202ENST00000389416 KIF6Q6ZMV9 814 aa16.09■□□□□ 0.17
PTPRN2-202ENST00000389416 SRCIN1Q9C0H9 1055 aa16.09■□□□□ 0.17
PTPRN2-202ENST00000389416 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
PTPRN2-202ENST00000389416 TBX22Q9Y458 520 aa16.09■□□□□ 0.17
PTPRN2-202ENST00000389416 NEO1Q92859 1461 aa16.09■□□□□ 0.17
PTPRN2-202ENST00000389416 MSH6P52701 1360 aa16.08■□□□□ 0.17
PTPRN2-202ENST00000389416 NINLQ9Y2I6 1382 aa16.08■□□□□ 0.17
PTPRN2-202ENST00000389416 GNAI2P04899 355 aa16.08■□□□□ 0.17
PTPRN2-202ENST00000389416 KLHL34Q8N239 644 aa16.08■□□□□ 0.17
PTPRN2-202ENST00000389416 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.17
PTPRN2-202ENST00000389416 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.17
PTPRN2-202ENST00000389416 MBD5Q9P267 1494 aa16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 REC8O95072 547 aa16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 APPP05067 770 aa16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
PTPRN2-202ENST00000389416 NGLY1Q96IV0 654 aa16.07■□□□□ 0.16
PTPRN2-202ENST00000389416 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
PTPRN2-202ENST00000389416 CHD1O14646 1710 aa16.07■□□□□ 0.16
PTPRN2-202ENST00000389416 NSD2O96028 1365 aa16.07■□□□□ 0.16
PTPRN2-202ENST00000389416 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
PTPRN2-202ENST00000389416 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
PTPRN2-202ENST00000389416 SSH1Q8WYL5 1049 aa16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 CARD14Q9BXL6 1004 aa16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 FAM83GA6ND36 823 aa16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 LRRFIP1Q32MZ4 808 aaKnown RBP16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 C19orf44Q9H6X5 657 aa16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 CDK11BP21127 795 aaKnown RBP16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
PTPRN2-202ENST00000389416 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
PTPRN2-202ENST00000389416 ERC2O15083 957 aa16.05■□□□□ 0.16
PTPRN2-202ENST00000389416 CABLES1Q8TDN4 633 aa16.05■□□□□ 0.16
PTPRN2-202ENST00000389416 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
PTPRN2-202ENST00000389416 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
PTPRN2-202ENST00000389416 FBXW7Q969H0 707 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms