RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 MCCD1P59942 119 aaPredicted RBP5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 VARS2Q5ST30 1063 aaKnown RBP5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 TMEM164Q5U3C3 297 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 BRICD5Q6PL45 260 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L2Q6R6M4 530 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L1Q7RTZ2 530 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 ZNF428Q96B54 188 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 LRCH3Q96II8 777 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 NOVA2Q9UNW9 492 aaKnown RBP5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 AXIN2Q9Y2T1 843 aa5.07□□□□□ -1.6
RNU6-140P-201ENST00000384566 FAM196BA6NMK8 535 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L5A8MUK1 530 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 LZTS3O60299 673 aaPredicted RBP5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 F12P00748 615 aaPredicted RBP5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 PTPRNQ16849 979 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 BLOC1S3Q6QNY0 202 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 RNF19BQ6ZMZ0 732 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 ZMIZ1Q9ULJ6 1067 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 GPSM3Q9Y4H4 160 aa5.06□□□□□ -1.6
RNU6-140P-201ENST00000384566 TK2O00142 265 aa5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 FMNL1O95466 1100 aaPredicted RBP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 ARID4AP29374 1257 aaPredicted RBP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 LARP1Q6PKG0 1096 aaKnown RBP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 TXNDC2Q86VQ3 553 aa5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 ZNF687Q8N1G0 1237 aa5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 MRPL50Q8N5N7 158 aaKnown RBP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 STK32AQ8WU08 396 aa5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 GPKOWQ92917 476 aaPredicted RBP eCLIP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 MKRN1Q9UHC7 482 aaKnown RBP5.05□□□□□ -1.6
RNU6-140P-201ENST00000384566 ATP5J2-PTCD1G3V325 749 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 NR1I2O75469 434 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 JUNDP17535 347 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 SSFA2P28290 1259 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 CTHP32929 405 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 PTK2Q05397 1052 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 SLFNL1Q499Z3 407 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 PDXDC2PQ6P474 469 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 SCUBE3Q8IX30 993 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 ARMC2Q8NEN0 867 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 FAM174AQ8TBP5 190 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 FAM200AQ8TCP9 573 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 MAP10Q9P2G4 905 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 CEP126Q9P2H0 1117 aa5.04□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L15C9J2P7 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L10C9JJH3 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L13C9JLJ4 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L12C9JPN9 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L11C9JVI0 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L21D6R901 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L18D6R9N7 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L22D6RA61 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L17D6RBQ6 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L19D6RCP7 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L20D6RJB6 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 RASA1P20936 1047 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 PPP4CP60510 307 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 USP17L24Q0WX57 530 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 PTK7Q13308 1070 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 CRTC2Q53ET0 693 aaPredicted RBP5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 PHLDB3Q6NSJ2 640 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 DEPDC4Q8N2C3 294 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 PHTF2Q8N3S3 785 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 THAP11Q96EK4 314 aa5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 CDCA7Q9BWT1 371 aaPredicted RBP5.03□□□□□ -1.6
RNU6-140P-201ENST00000384566 ERCC3P19447 782 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 NCOA4Q13772 614 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 MAP7D1Q3KQU3 841 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 RNF135Q8IUD6 432 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 PLPP7Q8NBV4 271 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 CLP1Q92989 425 aaKnown RBP5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 EVA1BQ9NVM1 165 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 MYT1LQ9UL68 1186 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 PCDHB3Q9Y5E6 796 aa5.02□□□□□ -1.61
RNU6-140P-201ENST00000384566 CCNYL3P0C7X3 344 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 FAM69CQ0P6D2 419 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 KCNH2Q12809 1159 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 EML3Q32P44 896 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 MSS51Q4VC12 460 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 NBPF14Q5TI25 921 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 ANKMY2Q8IV38 441 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 CHIC2Q9UKJ5 165 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 PCDHB9Q9Y5E1 797 aa5.01□□□□□ -1.61
RNU6-140P-201ENST00000384566 RBM47A0AV96 593 aaKnown RBP5□□□□□ -1.61
RNU6-140P-201ENST00000384566 SOWAHBA6NEL2 793 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 APLP1P51693 650 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 SWI5Q1ZZU3 235 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 TRIM50Q86XT4 487 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 OGFOD1Q8N543 542 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 ANKK1Q8NFD2 765 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 NUDT12Q9BQG2 462 aa5□□□□□ -1.61
RNU6-140P-201ENST00000384566 TSR3Q9UJK0 312 aaKnown RBP5□□□□□ -1.61
RNU6-140P-201ENST00000384566 GOLGA8CPA6NN73 597 aa4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 DXOO77932 396 aaKnown RBP4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 ATP1A2P50993 1020 aa4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 MMP16P51512 607 aa4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 EMP3P54852 163 aa4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 DPYDQ12882 1025 aa4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 TRAF7Q6Q0C0 670 aa4.99□□□□□ -1.61
RNU6-140P-201ENST00000384566 ADGRD1Q6QNK2 874 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms