RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 SSH2Q76I76 1423 aa33.61■■■□□ 2.97
TM6SF1-204ENST00000379390 ALS2Q96Q42 1657 aa33.61■■■□□ 2.97
TM6SF1-204ENST00000379390 PIK3C2AO00443 1686 aa33.6■■■□□ 2.97
TM6SF1-204ENST00000379390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.6■■■□□ 2.97
TM6SF1-204ENST00000379390 COL16A1Q07092 1604 aaPredicted RBP33.59■■■□□ 2.97
TM6SF1-204ENST00000379390 PAK3O75914 559 aaPredicted RBP33.58■■■□□ 2.97
TM6SF1-204ENST00000379390 SOS2Q07890 1332 aaPredicted RBP33.58■■■□□ 2.97
TM6SF1-204ENST00000379390 TTC21BQ7Z4L5 1316 aa33.57■■■□□ 2.96
TM6SF1-204ENST00000379390 PER1O15534 1290 aaPredicted RBP33.56■■■□□ 2.96
TM6SF1-204ENST00000379390 KNSTRNQ9Y448 316 aa33.55■■■□□ 2.96
TM6SF1-204ENST00000379390 BRD4O60885 1362 aaPredicted RBP33.54■■■□□ 2.96
TM6SF1-204ENST00000379390 ANKRD26Q9UPS8 1709 aa33.54■■■□□ 2.96
TM6SF1-204ENST00000379390 TNS3Q68CZ2 1445 aa33.53■■■□□ 2.96
TM6SF1-204ENST00000379390 MARF1Q9Y4F3 1742 aaKnown RBP33.53■■■□□ 2.96
TM6SF1-204ENST00000379390 SBNO1A3KN83 1393 aa33.53■■■□□ 2.96
TM6SF1-204ENST00000379390 TTC21AQ8NDW8 1320 aa33.51■■■□□ 2.96
TM6SF1-204ENST00000379390 NME9Q86XW9 330 aa33.51■■■□□ 2.96
TM6SF1-204ENST00000379390 CGNL1Q0VF96 1302 aa33.51■■■□□ 2.95
TM6SF1-204ENST00000379390 LMOD2Q6P5Q4 547 aa33.5■■■□□ 2.95
TM6SF1-204ENST00000379390 SPATA31A3Q5VYP0 1347 aa33.48■■■□□ 2.95
TM6SF1-204ENST00000379390 CNGB1Q14028 1251 aaPredicted RBP33.48■■■□□ 2.95
TM6SF1-204ENST00000379390 USP54Q70EL1 1684 aa33.47■■■□□ 2.95
TM6SF1-204ENST00000379390 AMER1Q5JTC6 1135 aaPredicted RBP33.46■■■□□ 2.95
TM6SF1-204ENST00000379390 NUTM2GQ5VZR2 741 aa33.46■■■□□ 2.95
TM6SF1-204ENST00000379390 ABTB2Q8N961 1025 aa33.46■■■□□ 2.95
TM6SF1-204ENST00000379390 ZRANB1Q9UGI0 708 aa33.46■■■□□ 2.95
TM6SF1-204ENST00000379390 FYB1O15117 783 aa33.46■■■□□ 2.95
TM6SF1-204ENST00000379390 GGNBP2Q9H3C7 697 aa33.45■■■□□ 2.95
TM6SF1-204ENST00000379390 CRYBG1Q9Y4K1 1723 aa33.43■■■□□ 2.94
TM6SF1-204ENST00000379390 HSPA1LP34931 641 aa33.42■■■□□ 2.94
TM6SF1-204ENST00000379390 CC2D1BQ5T0F9 858 aaKnown RBP33.42■■■□□ 2.94
TM6SF1-204ENST00000379390 LRRC59Q96AG4 307 aaKnown RBP33.42■■■□□ 2.94
TM6SF1-204ENST00000379390 ARHGEF10O15013 1369 aa33.42■■■□□ 2.94
TM6SF1-204ENST00000379390 ABCA3Q99758 1704 aa33.42■■■□□ 2.94
TM6SF1-204ENST00000379390 OVOS2A0A0J9YW53 1432 aa33.41■■■□□ 2.94
TM6SF1-204ENST00000379390 OVOS2Q6IE36 1432 aa33.41■■■□□ 2.94
TM6SF1-204ENST00000379390 PLEKHG5O94827 1062 aa33.41■■■□□ 2.94
TM6SF1-204ENST00000379390 FBXO41Q8TF61 875 aa33.41■■■□□ 2.94
TM6SF1-204ENST00000379390 NLRP6P59044 892 aa33.4■■■□□ 2.94
TM6SF1-204ENST00000379390 PHRF1Q9P1Y6 1649 aaKnown RBP33.4■■■□□ 2.94
TM6SF1-204ENST00000379390 NSD2O96028 1365 aa33.39■■■□□ 2.94
TM6SF1-204ENST00000379390 SHPRHQ149N8 1683 aa33.39■■■□□ 2.94
TM6SF1-204ENST00000379390 MED1Q15648 1581 aaPredicted RBP33.38■■■□□ 2.93
TM6SF1-204ENST00000379390 NPC1L1Q9UHC9 1359 aa33.38■■■□□ 2.93
TM6SF1-204ENST00000379390 COL22A1Q8NFW1 1626 aaPredicted RBP33.38■■■□□ 2.93
TM6SF1-204ENST00000379390 USP31Q70CQ4 1352 aa33.37■■■□□ 2.93
TM6SF1-204ENST00000379390 PNPLA6Q8IY17 1366 aa33.36■■■□□ 2.93
TM6SF1-204ENST00000379390 COG3Q96JB2 828 aa33.35■■■□□ 2.93
TM6SF1-204ENST00000379390 NLRP13Q86W25 1043 aa33.34■■■□□ 2.93
TM6SF1-204ENST00000379390 DIEXFQ68CQ4 756 aaKnown RBP33.32■■■□□ 2.92
TM6SF1-204ENST00000379390 SLIT3O75094 1523 aa33.32■■■□□ 2.92
TM6SF1-204ENST00000379390 CABLES1Q8TDN4 633 aa33.31■■■□□ 2.92
TM6SF1-204ENST00000379390 MAP2P11137 1827 aaKnown RBP33.31■■■□□ 2.92
TM6SF1-204ENST00000379390 USP19O94966 1318 aa33.3■■■□□ 2.92
TM6SF1-204ENST00000379390 SOX12O15370 315 aa33.29■■■□□ 2.92
TM6SF1-204ENST00000379390 MORC1Q86VD1 984 aa33.29■■■□□ 2.92
TM6SF1-204ENST00000379390 TNNT2P45379 298 aaPredicted RBP33.28■■■□□ 2.92
TM6SF1-204ENST00000379390 LTN1O94822 1766 aa33.28■■■□□ 2.92
TM6SF1-204ENST00000379390 JCADQ9P266 1359 aa33.28■■■□□ 2.92
TM6SF1-204ENST00000379390 NFAT5O94916 1531 aa33.27■■■□□ 2.92
TM6SF1-204ENST00000379390 PARD3Q8TEW0 1356 aa33.25■■■□□ 2.91
TM6SF1-204ENST00000379390 FBLN1P23142 703 aa33.24■■■□□ 2.91
TM6SF1-204ENST00000379390 GCP02774 474 aa33.21■■■□□ 2.91
TM6SF1-204ENST00000379390 PRKRIP1Q9H875 184 aaPredicted RBP33.21■■■□□ 2.91
TM6SF1-204ENST00000379390 HAP1P54257 671 aaPredicted RBP33.2■■■□□ 2.91
TM6SF1-204ENST00000379390 ANP32CO43423 234 aa33.2■■■□□ 2.9
TM6SF1-204ENST00000379390 KCNH5Q8NCM2 988 aa33.18■■■□□ 2.9
TM6SF1-204ENST00000379390 NUTM2BA6NNL0 878 aaPredicted RBP33.16■■■□□ 2.9
TM6SF1-204ENST00000379390 NUTM2EB1AL46 878 aaPredicted RBP33.16■■■□□ 2.9
TM6SF1-204ENST00000379390 RALBP1Q15311 655 aa33.16■■■□□ 2.9
TM6SF1-204ENST00000379390 NUTM2AQ8IVF1 878 aaPredicted RBP33.16■■■□□ 2.9
TM6SF1-204ENST00000379390 RRS1Q15050 365 aaKnown RBP33.15■■■□□ 2.9
TM6SF1-204ENST00000379390 PEAK1Q9H792 1746 aa33.15■■■□□ 2.9
TM6SF1-204ENST00000379390 ZC3H6P61129 1189 aaKnown RBP33.14■■■□□ 2.9
TM6SF1-204ENST00000379390 AATKQ6ZMQ8 1374 aa33.14■■■□□ 2.9
TM6SF1-204ENST00000379390 RGPD5Q99666 1765 aa33.13■■■□□ 2.89
TM6SF1-204ENST00000379390 ZBTB7CA1YPR0 619 aa33.12■■■□□ 2.89
TM6SF1-204ENST00000379390 LRP6O75581 1613 aa33.11■■■□□ 2.89
TM6SF1-204ENST00000379390 MAP3K19Q56UN5 1328 aa33.11■■■□□ 2.89
TM6SF1-204ENST00000379390 SPATA31A6Q5VVP1 1343 aa33.11■■■□□ 2.89
TM6SF1-204ENST00000379390 KIAA0232Q92628 1395 aa33.1■■■□□ 2.89
TM6SF1-204ENST00000379390 PPP2R1AP30153 589 aa33.1■■■□□ 2.89
TM6SF1-204ENST00000379390 EMILIN1Q9Y6C2 1016 aa33.1■■■□□ 2.89
TM6SF1-204ENST00000379390 MYBBP1AQ9BQG0 1328 aaKnown RBP33.08■■■□□ 2.89
TM6SF1-204ENST00000379390 COL18A1P39060 1754 aa33.08■■■□□ 2.89
TM6SF1-204ENST00000379390 POLKQ9UBT6 870 aa33.08■■■□□ 2.89
TM6SF1-204ENST00000379390 CPDO75976 1380 aa33.07■■■□□ 2.89
TM6SF1-204ENST00000379390 PPM1GO15355 546 aaPredicted RBP33.07■■■□□ 2.88
TM6SF1-204ENST00000379390 ADAMTS2O95450 1211 aa33.07■■■□□ 2.88
TM6SF1-204ENST00000379390 ARHGEF25Q86VW2 580 aa33.07■■■□□ 2.88
TM6SF1-204ENST00000379390 SMG6Q86US8 1419 aaKnown RBP33.07■■■□□ 2.88
TM6SF1-204ENST00000379390 PLCH1Q4KWH8 1693 aa33.05■■■□□ 2.88
TM6SF1-204ENST00000379390 CHRNA2Q15822 529 aa33.05■■■□□ 2.88
TM6SF1-204ENST00000379390 PRDM11Q9NQV5 511 aa33.05■■■□□ 2.88
TM6SF1-204ENST00000379390 COL14A1Q05707 1796 aaKnown RBP33.04■■■□□ 2.88
TM6SF1-204ENST00000379390 MTHFSP49914 203 aa33.04■■■□□ 2.88
TM6SF1-204ENST00000379390 LMO7Q8WWI1 1683 aa33.04■■■□□ 2.88
TM6SF1-204ENST00000379390 AMPHP49418 695 aa33.02■■■□□ 2.88
TM6SF1-204ENST00000379390 CDK12Q9NYV4 1490 aaPredicted RBP33.02■■■□□ 2.88
TM6SF1-204ENST00000379390 ILDR1Q86SU0 546 aaPredicted RBP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms