RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
AGRN-201ENST00000379370 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
AGRN-201ENST00000379370 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
AGRN-201ENST00000379370 SMC3Q9UQE7 1217 aa17.23■□□□□ 0.35
AGRN-201ENST00000379370 KRT18P05783 430 aaKnown RBP17.23■□□□□ 0.35
AGRN-201ENST00000379370 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
AGRN-201ENST00000379370 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
AGRN-201ENST00000379370 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
AGRN-201ENST00000379370 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
AGRN-201ENST00000379370 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
AGRN-201ENST00000379370 MTHFSP49914 203 aa17.22■□□□□ 0.35
AGRN-201ENST00000379370 SLC3A2P08195 630 aaKnown RBP17.21■□□□□ 0.35
AGRN-201ENST00000379370 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
AGRN-201ENST00000379370 XBP1P17861 261 aa17.21■□□□□ 0.35
AGRN-201ENST00000379370 PIBF1Q8WXW3 757 aa17.21■□□□□ 0.35
AGRN-201ENST00000379370 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
AGRN-201ENST00000379370 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
AGRN-201ENST00000379370 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
AGRN-201ENST00000379370 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
AGRN-201ENST00000379370 GNL3LQ9NVN8 582 aaKnown RBP17.2■□□□□ 0.34
AGRN-201ENST00000379370 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
AGRN-201ENST00000379370 MATR3P43243 847 aaKnown RBP eCLIP17.19■□□□□ 0.34
AGRN-201ENST00000379370 PDILTQ8N807 584 aa17.19■□□□□ 0.34
AGRN-201ENST00000379370 CASKIN1Q8WXD9 1431 aa17.19■□□□□ 0.34
AGRN-201ENST00000379370 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
AGRN-201ENST00000379370 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
AGRN-201ENST00000379370 KIF21BO75037 1637 aa17.18■□□□□ 0.34
AGRN-201ENST00000379370 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
AGRN-201ENST00000379370 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
AGRN-201ENST00000379370 WDR70Q9NW82 654 aa17.17■□□□□ 0.34
AGRN-201ENST00000379370 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
AGRN-201ENST00000379370 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
AGRN-201ENST00000379370 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
AGRN-201ENST00000379370 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
AGRN-201ENST00000379370 CFTRP13569 1480 aa17.17■□□□□ 0.34
AGRN-201ENST00000379370 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
AGRN-201ENST00000379370 SASS6Q6UVJ0 657 aa17.17■□□□□ 0.34
AGRN-201ENST00000379370 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
AGRN-201ENST00000379370 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
AGRN-201ENST00000379370 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
AGRN-201ENST00000379370 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
AGRN-201ENST00000379370 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
AGRN-201ENST00000379370 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.348e-7■■■■■ 27
AGRN-201ENST00000379370 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
AGRN-201ENST00000379370 CLASRPQ8N2M8 674 aaKnown RBP17.15■□□□□ 0.34
AGRN-201ENST00000379370 NGLY1Q96IV0 654 aa17.15■□□□□ 0.34
AGRN-201ENST00000379370 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
AGRN-201ENST00000379370 CNTLNQ9NXG0 1405 aa17.15■□□□□ 0.34
AGRN-201ENST00000379370 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
AGRN-201ENST00000379370 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
AGRN-201ENST00000379370 WWC3Q9ULE0 1092 aa17.14■□□□□ 0.33
AGRN-201ENST00000379370 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.33
AGRN-201ENST00000379370 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
AGRN-201ENST00000379370 NUP133Q8WUM0 1156 aa17.14■□□□□ 0.33
AGRN-201ENST00000379370 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
AGRN-201ENST00000379370 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
AGRN-201ENST00000379370 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
AGRN-201ENST00000379370 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
AGRN-201ENST00000379370 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
AGRN-201ENST00000379370 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
AGRN-201ENST00000379370 SYCP1Q15431 976 aa17.12■□□□□ 0.33
AGRN-201ENST00000379370 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
AGRN-201ENST00000379370 CCDC57Q2TAC2 916 aa17.12■□□□□ 0.33
AGRN-201ENST00000379370 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
AGRN-201ENST00000379370 USP5P45974 858 aa17.12■□□□□ 0.33
AGRN-201ENST00000379370 SUPT6HQ7KZ85 1726 aaKnown RBP17.11■□□□□ 0.33
AGRN-201ENST00000379370 ECM2O94769 699 aaPredicted RBP17.11■□□□□ 0.33
AGRN-201ENST00000379370 IPO9Q96P70 1041 aaKnown RBP17.11■□□□□ 0.33
AGRN-201ENST00000379370 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 PLEKHH2Q8IVE3 1493 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 ZPR1O75312 459 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 CCDC97Q96F63 343 aaPredicted RBP17.11■□□□□ 0.33
AGRN-201ENST00000379370 TMEM87AQ8NBN3 555 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
AGRN-201ENST00000379370 STK3Q13188 491 aa17.1■□□□□ 0.33
AGRN-201ENST00000379370 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
AGRN-201ENST00000379370 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
AGRN-201ENST00000379370 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
AGRN-201ENST00000379370 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
AGRN-201ENST00000379370 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
AGRN-201ENST00000379370 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
AGRN-201ENST00000379370 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
AGRN-201ENST00000379370 ZNF76P36508 570 aa17.09■□□□□ 0.33
AGRN-201ENST00000379370 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
AGRN-201ENST00000379370 ZBED9Q6R2W3 1325 aa17.09■□□□□ 0.33
AGRN-201ENST00000379370 ABCF2Q9UG63 623 aa17.08■□□□□ 0.33
AGRN-201ENST00000379370 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
AGRN-201ENST00000379370 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
AGRN-201ENST00000379370 RUFY1Q96T51 708 aa17.08■□□□□ 0.32
AGRN-201ENST00000379370 SCLT1Q96NL6 688 aa17.08■□□□□ 0.32
AGRN-201ENST00000379370 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
AGRN-201ENST00000379370 ANKIB1Q9P2G1 1089 aa17.07■□□□□ 0.32
AGRN-201ENST00000379370 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
AGRN-201ENST00000379370 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.07■□□□□ 0.323e-8■■■■□ 24.1
AGRN-201ENST00000379370 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
AGRN-201ENST00000379370 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
AGRN-201ENST00000379370 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
AGRN-201ENST00000379370 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms