RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
ITM2B-202ENST00000378565 NF2P35240 595 aa13.49□□□□□ -0.25
ITM2B-202ENST00000378565 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
ITM2B-202ENST00000378565 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
ITM2B-202ENST00000378565 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
ITM2B-202ENST00000378565 TIGD1Q96MW7 591 aa13.49□□□□□ -0.25
ITM2B-202ENST00000378565 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
ITM2B-202ENST00000378565 RAD21O60216 631 aa13.49□□□□□ -0.25
ITM2B-202ENST00000378565 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
ITM2B-202ENST00000378565 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
ITM2B-202ENST00000378565 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 CCDC91Q7Z6B0 441 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 KIF18AQ8NI77 898 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 NEK4P51957 841 aa13.48□□□□□ -0.25
ITM2B-202ENST00000378565 CTDP1Q9Y5B0 961 aaPredicted RBP13.47□□□□□ -0.25
ITM2B-202ENST00000378565 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
ITM2B-202ENST00000378565 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
ITM2B-202ENST00000378565 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
ITM2B-202ENST00000378565 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
ITM2B-202ENST00000378565 CCDC148Q8NFR7 591 aa13.46□□□□□ -0.25
ITM2B-202ENST00000378565 STK38Q15208 465 aa13.46□□□□□ -0.25
ITM2B-202ENST00000378565 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
ITM2B-202ENST00000378565 RBM25P49756 843 aaKnown RBP13.46□□□□□ -0.26
ITM2B-202ENST00000378565 CDK5RAP3Q96JB5 506 aa13.46□□□□□ -0.26
ITM2B-202ENST00000378565 KRT85P78386 507 aa13.46□□□□□ -0.26
ITM2B-202ENST00000378565 ST20-MTHFSA0A0A6YYL1 179 aa13.46□□□□□ -0.26
ITM2B-202ENST00000378565 IRX3P78415 501 aaPredicted RBP13.46□□□□□ -0.26
ITM2B-202ENST00000378565 CEP57L1Q8IYX8 460 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 DYNC1I1O14576 645 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 CFAP45Q9UL16 551 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
ITM2B-202ENST00000378565 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 HIP1O00291 1037 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 APAF1O14727 1248 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 ME1P48163 572 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
ITM2B-202ENST00000378565 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
ITM2B-202ENST00000378565 SOGA1O94964 1423 aa13.44□□□□□ -0.26
ITM2B-202ENST00000378565 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
ITM2B-202ENST00000378565 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
ITM2B-202ENST00000378565 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
ITM2B-202ENST00000378565 CEP63Q96MT8 703 aa13.44□□□□□ -0.26
ITM2B-202ENST00000378565 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
ITM2B-202ENST00000378565 MNAT1P51948 309 aa13.44□□□□□ -0.26
ITM2B-202ENST00000378565 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
ITM2B-202ENST00000378565 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 CUX2O14529 1486 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 EPB41L2O43491 1005 aaKnown RBP13.43□□□□□ -0.26
ITM2B-202ENST00000378565 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
ITM2B-202ENST00000378565 FKBP5Q13451 457 aaPredicted RBP13.43□□□□□ -0.26
ITM2B-202ENST00000378565 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 KIAA1328Q86T90 577 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 MPNDQ8N594 471 aa13.43□□□□□ -0.26
ITM2B-202ENST00000378565 SFPQP23246 707 aaKnown RBP eCLIP13.42□□□□□ -0.26
ITM2B-202ENST00000378565 MCM4P33991 863 aa13.42□□□□□ -0.26
ITM2B-202ENST00000378565 BBXQ8WY36 941 aaPredicted RBP13.42□□□□□ -0.26
ITM2B-202ENST00000378565 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
ITM2B-202ENST00000378565 ZSCAN12O43309 604 aa13.42□□□□□ -0.26
ITM2B-202ENST00000378565 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
ITM2B-202ENST00000378565 PDIA4P13667 645 aaKnown RBP13.42□□□□□ -0.26
ITM2B-202ENST00000378565 JAKMIP3Q5VZ66 844 aa13.42□□□□□ -0.26
ITM2B-202ENST00000378565 TEFQ10587 303 aa13.41□□□□□ -0.26
ITM2B-202ENST00000378565 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
ITM2B-202ENST00000378565 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
ITM2B-202ENST00000378565 COG3Q96JB2 828 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 SYCE3A1L190 88 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
ITM2B-202ENST00000378565 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
ITM2B-202ENST00000378565 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
ITM2B-202ENST00000378565 CASQ1P31415 396 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
ITM2B-202ENST00000378565 RIPK4P57078 832 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 MCM5P33992 734 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 RNF187Q5TA31 235 aaPredicted RBP13.4□□□□□ -0.26
ITM2B-202ENST00000378565 DNAAF4Q8WXU2 420 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 SMTNL1A8MU46 457 aa13.4□□□□□ -0.26
ITM2B-202ENST00000378565 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
ITM2B-202ENST00000378565 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
ITM2B-202ENST00000378565 KIF5CO60282 957 aa13.39□□□□□ -0.27
ITM2B-202ENST00000378565 STAMBPO95630 424 aa13.39□□□□□ -0.27
ITM2B-202ENST00000378565 CCDC175P0C221 793 aa13.39□□□□□ -0.27
ITM2B-202ENST00000378565 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
ITM2B-202ENST00000378565 PPM1EQ8WY54 764 aa13.39□□□□□ -0.27
ITM2B-202ENST00000378565 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
ITM2B-202ENST00000378565 MAP3K11Q16584 847 aa13.39□□□□□ -0.27
ITM2B-202ENST00000378565 SMC1AQ14683 1233 aaKnown RBP13.38□□□□□ -0.27
ITM2B-202ENST00000378565 TNNT1P13805 278 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 KIF3BO15066 747 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
ITM2B-202ENST00000378565 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms