RNA–Protein interactions for RNA: ENST00000378538.7

SPI1-202, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPI1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-202ENST00000378538 NBPF1Q3BBV0 1214 aa31.03■■■□□ 2.56
SPI1-202ENST00000378538 NRAPQ86VF7 1730 aa31■■■□□ 2.55
SPI1-202ENST00000378538 ZRANB1Q9UGI0 708 aa30.99■■■□□ 2.55
SPI1-202ENST00000378538 KIAA1210Q9ULL0 1709 aa30.99■■■□□ 2.55
SPI1-202ENST00000378538 CRYBG1Q9Y4K1 1723 aa30.99■■■□□ 2.55
SPI1-202ENST00000378538 ITSN1Q15811 1721 aa30.98■■■□□ 2.55
SPI1-202ENST00000378538 BLMP54132 1417 aaPredicted RBP30.98■■■□□ 2.55
SPI1-202ENST00000378538 KRT27Q7Z3Y8 459 aa30.98■■■□□ 2.55
SPI1-202ENST00000378538 COL14A1Q05707 1796 aaKnown RBP30.97■■■□□ 2.55
SPI1-202ENST00000378538 FAM98CQ17RN3 349 aaKnown RBP30.95■■■□□ 2.54
SPI1-202ENST00000378538 DEFB132Q7Z7B7 95 aa30.94■■■□□ 2.54
SPI1-202ENST00000378538 ACEP12821 1306 aa30.93■■■□□ 2.54
SPI1-202ENST00000378538 CCDC61Q9Y6R9 512 aa30.93■■■□□ 2.54
SPI1-202ENST00000378538 NBPF8Q3BBV2 869 aa30.92■■■□□ 2.54
SPI1-202ENST00000378538 POLR3AO14802 1390 aaPredicted RBP30.92■■■□□ 2.54
SPI1-202ENST00000378538 A0A0G2JS52 829 aa30.91■■■□□ 2.54
SPI1-202ENST00000378538 MYT1Q01538 1121 aa30.91■■■□□ 2.54
SPI1-202ENST00000378538 PRDM11Q9NQV5 511 aa30.91■■■□□ 2.54
SPI1-202ENST00000378538 PLEKHG3A1L390 1219 aa30.9■■■□□ 2.54
SPI1-202ENST00000378538 NUTM2GQ5VZR2 741 aa30.9■■■□□ 2.54
SPI1-202ENST00000378538 SPATA31A5Q5VU36 1347 aa30.9■■■□□ 2.54
SPI1-202ENST00000378538 SPATA31A7Q8IWB4 1347 aa30.9■■■□□ 2.54
SPI1-202ENST00000378538 TOPAZ1Q8N9V7 1692 aa30.9■■■□□ 2.54
SPI1-202ENST00000378538 CHRNA2Q15822 529 aa30.88■■■□□ 2.53
SPI1-202ENST00000378538 KIAA0232Q92628 1395 aa30.87■■■□□ 2.53
SPI1-202ENST00000378538 SF3B2Q13435 895 aaKnown RBP30.87■■■□□ 2.53
SPI1-202ENST00000378538 ZC3H6P61129 1189 aaKnown RBP30.85■■■□□ 2.53
SPI1-202ENST00000378538 L3MBTL2Q969R5 705 aa30.84■■■□□ 2.53
SPI1-202ENST00000378538 CENPJQ9HC77 1338 aaPredicted RBP30.84■■■□□ 2.53
SPI1-202ENST00000378538 PHRF1Q9P1Y6 1649 aaKnown RBP30.84■■■□□ 2.53
SPI1-202ENST00000378538 FAM182BQ5T319 152 aa30.82■■■□□ 2.52
SPI1-202ENST00000378538 SRPK2P78362 688 aaKnown RBP30.81■■■□□ 2.52
SPI1-202ENST00000378538 CABP2Q9NPB3 220 aa30.81■■■□□ 2.52
SPI1-202ENST00000378538 ABTB2Q8N961 1025 aa30.81■■■□□ 2.52
SPI1-202ENST00000378538 SIN3AQ96ST3 1273 aa30.81■■■□□ 2.52
SPI1-202ENST00000378538 SPATA31A1Q5TZJ5 1347 aa30.8■■■□□ 2.52
SPI1-202ENST00000378538 STRN4Q9NRL3 753 aa30.79■■■□□ 2.52
SPI1-202ENST00000378538 PPIP5K1Q6PFW1 1433 aa30.78■■■□□ 2.52
SPI1-202ENST00000378538 THSD7AQ9UPZ6 1657 aa30.77■■■□□ 2.52
SPI1-202ENST00000378538 QRICH2Q9H0J4 1663 aa30.74■■■□□ 2.51
SPI1-202ENST00000378538 USP19O94966 1318 aa30.73■■■□□ 2.51
SPI1-202ENST00000378538 BAG6P46379 1132 aa30.73■■■□□ 2.51
SPI1-202ENST00000378538 CABP1Q9NZU7 370 aa30.73■■■□□ 2.51
SPI1-202ENST00000378538 NRKQ7Z2Y5 1582 aa30.72■■■□□ 2.51
SPI1-202ENST00000378538 CAMTA1Q9Y6Y1 1673 aa30.71■■■□□ 2.51
SPI1-202ENST00000378538 EVA1CP58658 441 aa30.71■■■□□ 2.51
SPI1-202ENST00000378538 NEUROD1Q13562 356 aa30.71■■■□□ 2.51
SPI1-202ENST00000378538 NLRP13Q86W25 1043 aa30.71■■■□□ 2.51
SPI1-202ENST00000378538 GCP02774 474 aa30.7■■■□□ 2.5
SPI1-202ENST00000378538 USP35Q9P2H5 1018 aa30.7■■■□□ 2.5
SPI1-202ENST00000378538 EN1Q05925 392 aaPredicted RBP30.69■■■□□ 2.5
SPI1-202ENST00000378538 CPDO75976 1380 aa30.69■■■□□ 2.5
SPI1-202ENST00000378538 TRPM1Q7Z4N2 1603 aa30.68■■■□□ 2.5
SPI1-202ENST00000378538 SSH2Q76I76 1423 aa30.68■■■□□ 2.5
SPI1-202ENST00000378538 LARP1Q6PKG0 1096 aaKnown RBP30.67■■■□□ 2.5
SPI1-202ENST00000378538 RGPD1P0DJD0 1748 aa30.66■■■□□ 2.5
SPI1-202ENST00000378538 LMO7Q8WWI1 1683 aa30.65■■■□□ 2.5
SPI1-202ENST00000378538 BRD4O60885 1362 aaPredicted RBP30.65■■■□□ 2.5
SPI1-202ENST00000378538 BARGINQ6ZT62 677 aa30.64■■■□□ 2.5
SPI1-202ENST00000378538 USP6P35125 1406 aa30.64■■■□□ 2.5
SPI1-202ENST00000378538 EVC2Q86UK5 1308 aa30.62■■■□□ 2.49
SPI1-202ENST00000378538 PSDA5PKW4 1024 aaPredicted RBP30.62■■■□□ 2.49
SPI1-202ENST00000378538 NLRP6P59044 892 aa30.62■■■□□ 2.49
SPI1-202ENST00000378538 FAM196AQ6ZSG2 479 aa30.61■■■□□ 2.49
SPI1-202ENST00000378538 ROCK2O75116 1388 aaKnown RBP30.61■■■□□ 2.49
SPI1-202ENST00000378538 TRIM37O94972 964 aa30.6■■■□□ 2.49
SPI1-202ENST00000378538 TCP11L2Q8N4U5 519 aa30.6■■■□□ 2.49
SPI1-202ENST00000378538 TNS1Q9HBL0 1735 aaKnown RBP30.6■■■□□ 2.49
SPI1-202ENST00000378538 DISP2A7MBM2 1401 aa30.57■■■□□ 2.48
SPI1-202ENST00000378538 PDE3BQ13370 1112 aa30.56■■■□□ 2.48
SPI1-202ENST00000378538 EZH2Q15910 746 aaKnown RBP30.56■■■□□ 2.48
SPI1-202ENST00000378538 COL5A2P05997 1499 aaPredicted RBP30.56■■■□□ 2.48
SPI1-202ENST00000378538 ZBTB7CA1YPR0 619 aa30.56■■■□□ 2.48
SPI1-202ENST00000378538 THRAP3Q9Y2W1 955 aaKnown RBP30.55■■■□□ 2.48
SPI1-202ENST00000378538 SLIT3O75094 1523 aa30.54■■■□□ 2.48
SPI1-202ENST00000378538 CAMKK2Q96RR4 588 aa30.54■■■□□ 2.48
SPI1-202ENST00000378538 PIK3C2AO00443 1686 aa30.53■■■□□ 2.48
SPI1-202ENST00000378538 ZNF692Q9BU19 519 aaPredicted RBP30.52■■■□□ 2.48
SPI1-202ENST00000378538 AATKQ6ZMQ8 1374 aa30.52■■■□□ 2.48
SPI1-202ENST00000378538 TTC21BQ7Z4L5 1316 aa30.51■■■□□ 2.48
SPI1-202ENST00000378538 APBA3O96018 575 aa30.51■■■□□ 2.47
SPI1-202ENST00000378538 R3HDM1Q15032 1099 aaKnown RBP30.49■■■□□ 2.47
SPI1-202ENST00000378538 CRB1P82279 1406 aa30.49■■■□□ 2.47
SPI1-202ENST00000378538 AXIN2Q9Y2T1 843 aa30.48■■■□□ 2.47
SPI1-202ENST00000378538 COL18A1P39060 1754 aa30.48■■■□□ 2.47
SPI1-202ENST00000378538 LRP5O75197 1615 aa30.48■■■□□ 2.47
SPI1-202ENST00000378538 AKAP12Q02952 1782 aa30.48■■■□□ 2.47
SPI1-202ENST00000378538 PARP4Q9UKK3 1724 aaKnown RBP30.45■■■□□ 2.47
SPI1-202ENST00000378538 CPSF1Q10570 1443 aaKnown RBP30.45■■■□□ 2.47
SPI1-202ENST00000378538 ARHGEF25Q86VW2 580 aa30.45■■■□□ 2.46
SPI1-202ENST00000378538 TOM1L2Q6ZVM7 507 aa30.42■■■□□ 2.46
SPI1-202ENST00000378538 TTC21AQ8NDW8 1320 aa30.42■■■□□ 2.46
SPI1-202ENST00000378538 SOX12O15370 315 aa30.41■■■□□ 2.46
SPI1-202ENST00000378538 CARD11Q9BXL7 1154 aa30.41■■■□□ 2.46
SPI1-202ENST00000378538 KTN1Q86UP2 1357 aaKnown RBP30.41■■■□□ 2.46
SPI1-202ENST00000378538 KCNH5Q8NCM2 988 aa30.4■■■□□ 2.46
SPI1-202ENST00000378538 PARD3Q8TEW0 1356 aa30.4■■■□□ 2.46
SPI1-202ENST00000378538 WDR17Q8IZU2 1322 aa30.39■■■□□ 2.46
SPI1-202ENST00000378538 RGPD5Q99666 1765 aa30.39■■■□□ 2.45
SPI1-202ENST00000378538 SBNO2Q9Y2G9 1366 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms