RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TULP1O00294 542 aaPredicted RBP26.1■■□□□ 1.77
SKI-201ENST00000378536 DDX54Q8TDD1 881 aaKnown RBP26.1■■□□□ 1.77
SKI-201ENST00000378536 GNAI3P08754 354 aa26.09■■□□□ 1.77
SKI-201ENST00000378536 PTMSP20962 102 aa26.09■■□□□ 1.77
SKI-201ENST00000378536 RUFY2Q8WXA3 655 aa26.09■■□□□ 1.77
SKI-201ENST00000378536 NFE2L2Q16236 605 aa26.09■■□□□ 1.77
SKI-201ENST00000378536 HDGFL1Q5TGJ6 251 aa26.09■■□□□ 1.77
SKI-201ENST00000378536 PRAG1Q86YV5 1406 aa26.08■■□□□ 1.77
SKI-201ENST00000378536 FOXO3O43524 673 aa26.08■■□□□ 1.76
SKI-201ENST00000378536 NOB1Q9ULX3 412 aaKnown RBP26.07■■□□□ 1.76
SKI-201ENST00000378536 NSD2O96028 1365 aa26.07■■□□□ 1.76
SKI-201ENST00000378536 HTATSF1O43719 755 aaKnown RBP26.07■■□□□ 1.76
SKI-201ENST00000378536 SLC4A2P04920 1241 aa26.07■■□□□ 1.76
SKI-201ENST00000378536 ATP7AQ04656 1500 aa26.07■■□□□ 1.76
SKI-201ENST00000378536 TMPOP42166 694 aaKnown RBP26.06■■□□□ 1.76
SKI-201ENST00000378536 PDE3AQ14432 1141 aa26.06■■□□□ 1.76
SKI-201ENST00000378536 DMRT2Q9Y5R5 561 aa26.06■■□□□ 1.76
SKI-201ENST00000378536 LNPKQ9C0E8 428 aa26.05■■□□□ 1.76
SKI-201ENST00000378536 REC8O95072 547 aa26.05■■□□□ 1.76
SKI-201ENST00000378536 ADGRL2O95490 1459 aa26.05■■□□□ 1.76
SKI-201ENST00000378536 KIF6Q6ZMV9 814 aa26.04■■□□□ 1.76
SKI-201ENST00000378536 BCAR3O75815 825 aa26.04■■□□□ 1.76
SKI-201ENST00000378536 GOLGA6L6A8MZA4 724 aa26.04■■□□□ 1.76
SKI-201ENST00000378536 WWC1Q8IX03 1113 aa26.03■■□□□ 1.76
SKI-201ENST00000378536 GNAT3A8MTJ3 354 aa26.02■■□□□ 1.76
SKI-201ENST00000378536 VPS37DQ86XT2 251 aa26.02■■□□□ 1.76
SKI-201ENST00000378536 EMILIN1Q9Y6C2 1016 aa26.02■■□□□ 1.76
SKI-201ENST00000378536 LRPPRCP42704 1394 aaKnown RBP26.02■■□□□ 1.76
SKI-201ENST00000378536 ERC2O15083 957 aa26.02■■□□□ 1.76
SKI-201ENST00000378536 FOXD4L1Q9NU39 408 aa26.02■■□□□ 1.76
SKI-201ENST00000378536 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
SKI-201ENST00000378536 ATP10AO60312 1499 aa26.01■■□□□ 1.75
SKI-201ENST00000378536 EIF2AK4Q9P2K8 1649 aaKnown RBP26■■□□□ 1.75
SKI-201ENST00000378536 BTBD11A6QL63 1104 aa26■■□□□ 1.75
SKI-201ENST00000378536 ACEP12821 1306 aa25.99■■□□□ 1.75
SKI-201ENST00000378536 KIF3AQ9Y496 699 aa25.98■■□□□ 1.75
SKI-201ENST00000378536 NOL10Q9BSC4 688 aaKnown RBP25.98■■□□□ 1.75
SKI-201ENST00000378536 KRT28Q7Z3Y7 464 aa25.97■■□□□ 1.75
SKI-201ENST00000378536 PZPP20742 1482 aa25.97■■□□□ 1.75
SKI-201ENST00000378536 CCT4P50991 539 aaKnown RBP25.97■■□□□ 1.75
SKI-201ENST00000378536 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
SKI-201ENST00000378536 SLFN5Q08AF3 891 aa25.96■■□□□ 1.75
SKI-201ENST00000378536 CADPS2Q86UW7 1296 aa25.96■■□□□ 1.75
SKI-201ENST00000378536 NEUROD6Q96NK8 337 aa25.96■■□□□ 1.75
SKI-201ENST00000378536 GNAI2P04899 355 aa25.96■■□□□ 1.75
SKI-201ENST00000378536 ZKSCAN1P17029 563 aaPredicted RBP25.96■■□□□ 1.75
SKI-201ENST00000378536 ZNF428Q96B54 188 aa25.96■■□□□ 1.75
SKI-201ENST00000378536 MAGI3Q5TCQ9 1506 aa25.96■■□□□ 1.75
SKI-201ENST00000378536 INTS3Q68E01 1043 aaKnown RBP25.95■■□□□ 1.75
SKI-201ENST00000378536 ABCA8O94911 1581 aa25.95■■□□□ 1.74
SKI-201ENST00000378536 NEO1Q92859 1461 aa25.95■■□□□ 1.74
SKI-201ENST00000378536 ATF7IPQ6VMQ6 1270 aa25.95■■□□□ 1.74
SKI-201ENST00000378536 ANKRD36BQ8N2N9 1353 aa25.94■■□□□ 1.74
SKI-201ENST00000378536 SURF6O75683 361 aaKnown RBP25.94■■□□□ 1.74
SKI-201ENST00000378536 CHMP4CQ96CF2 233 aa25.93■■□□□ 1.74
SKI-201ENST00000378536 ARHGEF12Q9NZN5 1544 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 L1TD1Q5T7N2 865 aaKnown RBP25.92■■□□□ 1.74
SKI-201ENST00000378536 CSPP1Q1MSJ5 1256 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 AMOTQ4VCS5 1084 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 NRDCO43847 1150 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 DNTTIP2Q5QJE6 756 aaKnown RBP25.92■■□□□ 1.74
SKI-201ENST00000378536 SRCIN1Q9C0H9 1055 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 C1orf115Q9H7X2 142 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 ANO2Q9NQ90 1003 aa25.92■■□□□ 1.74
SKI-201ENST00000378536 MCM10Q7L590 875 aa25.91■■□□□ 1.74
SKI-201ENST00000378536 AMOTL1Q8IY63 956 aa25.91■■□□□ 1.74
SKI-201ENST00000378536 SYAP1Q96A49 352 aaPredicted RBP25.91■■□□□ 1.74
SKI-201ENST00000378536 TTC21BQ7Z4L5 1316 aa25.91■■□□□ 1.74
SKI-201ENST00000378536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.91■■□□□ 1.742e-6■■■■□ 20.1
SKI-201ENST00000378536 CLASRPQ8N2M8 674 aaKnown RBP25.91■■□□□ 1.74
SKI-201ENST00000378536 USHBP1Q8N6Y0 703 aa25.91■■□□□ 1.74
SKI-201ENST00000378536 APPP05067 770 aa25.9■■□□□ 1.74
SKI-201ENST00000378536 FAM177BA6PVY3 158 aa25.9■■□□□ 1.74
SKI-201ENST00000378536 MYL6BP14649 208 aa25.9■■□□□ 1.74
SKI-201ENST00000378536 IFT57Q9NWB7 429 aa25.89■■□□□ 1.74
SKI-201ENST00000378536 RNF20Q5VTR2 975 aa25.89■■□□□ 1.74
SKI-201ENST00000378536 THUMPD2Q9BTF0 503 aaKnown RBP25.89■■□□□ 1.74
SKI-201ENST00000378536 MSH6P52701 1360 aa25.89■■□□□ 1.74
SKI-201ENST00000378536 GCC1Q96CN9 775 aa25.89■■□□□ 1.74
SKI-201ENST00000378536 CHD1O14646 1710 aa25.89■■□□□ 1.73
SKI-201ENST00000378536 PPIP5K1Q6PFW1 1433 aa25.88■■□□□ 1.73
SKI-201ENST00000378536 MVPQ14764 893 aaKnown RBP25.88■■□□□ 1.73
SKI-201ENST00000378536 CFAP74Q9C0B2 1584 aa25.87■■□□□ 1.73
SKI-201ENST00000378536 TTC21AQ8NDW8 1320 aa25.86■■□□□ 1.73
SKI-201ENST00000378536 ERC1Q8IUD2 1116 aa25.86■■□□□ 1.73
SKI-201ENST00000378536 MYO5CQ9NQX4 1742 aa25.86■■□□□ 1.73
SKI-201ENST00000378536 SYNE3Q6ZMZ3 975 aa25.86■■□□□ 1.73
SKI-201ENST00000378536 CDC45O75419 566 aa25.86■■□□□ 1.73
SKI-201ENST00000378536 DCTN1Q14203 1278 aa25.86■■□□□ 1.73
SKI-201ENST00000378536 PHF23Q9BUL5 403 aaPredicted RBP25.85■■□□□ 1.73
SKI-201ENST00000378536 MIS18AQ9NYP9 233 aa25.85■■□□□ 1.73
SKI-201ENST00000378536 GZF1Q9H116 711 aaPredicted RBP25.85■■□□□ 1.73
SKI-201ENST00000378536 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
SKI-201ENST00000378536 FAM184AQ8NB25 1140 aa25.84■■□□□ 1.73
SKI-201ENST00000378536 FBXW7Q969H0 707 aa25.84■■□□□ 1.73
SKI-201ENST00000378536 PDZRN3Q9UPQ7 1066 aa25.84■■□□□ 1.73
SKI-201ENST00000378536 H3BQV1 296 aa25.83■■□□□ 1.73
SKI-201ENST00000378536 TAF7Q15545 349 aaPredicted RBP25.83■■□□□ 1.73
SKI-201ENST00000378536 IFFO2Q5TF58 517 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms